Mercurial > repos > nanettec > qtlmap_15
comparison qtlmap_15/readme.txt @ 0:fa0693cf076b draft
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| author | nanettec |
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| date | Fri, 18 Mar 2016 05:51:39 -0400 |
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| -1:000000000000 | 0:fa0693cf076b |
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| 1 ====================================================================== | |
| 2 qtlmap_15 | |
| 3 ====================================================================== | |
| 4 ### This is the second tool in the eQTL mapper pipeline: | |
| 5 split_15, qtlmap_15, save_z_15, integrate_15 | |
| 6 | |
| 7 Link to the workflow (for import): http://chewbacca.bi.up.ac.za:8080/u/nanette/w/15-parallel | |
| 8 | |
| 9 QTL Cartographer is employed for eQTL mapping. The results are parsed. | |
| 10 | |
| 11 This tool must be executed 15 times in parallel; every time with a different .inp input file (every time the .map and parameters.txt input files are used). Each execution will produce one .txt output file. | |
| 12 | |
| 13 --------------- | |
| 14 Installation | |
| 15 --------------- | |
| 16 | |
| 17 The eQTL mapper pipeline is available for: | |
| 18 * command line usage | |
| 19 * integration into Galaxy servers | |
| 20 | |
| 21 | |
| 22 Requirements: Python 2.7 | |
| 23 QTL Cartographer 1.17 |