view qtlmap_15/readme.txt @ 0:fa0693cf076b draft

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author nanettec
date Fri, 18 Mar 2016 05:51:39 -0400
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qtlmap_15
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### This is the second tool in the eQTL mapper pipeline: 
split_15, qtlmap_15, save_z_15, integrate_15

Link to the workflow (for import): http://chewbacca.bi.up.ac.za:8080/u/nanette/w/15-parallel

QTL Cartographer is employed for eQTL mapping. The results are parsed. 

This tool must be executed 15 times in parallel; every time with a different .inp input file (every time the .map and parameters.txt input files are used). Each execution will produce one .txt output file.  

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Installation
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The eQTL mapper pipeline is available for: 
* command line usage
* integration into Galaxy servers


Requirements:  	Python 2.7
		QTL Cartographer 1.17