view test-data/filter-stats-out.tabular @ 1:2fbea749a1d1 draft default tip

"planemo upload for repository https://github.com/phac-nml/snvphyl-galaxy commit 57067916cb7b9c5b65c1da59d4bbb846c3e3af2f"
author nml
date Tue, 23 Jun 2020 10:25:53 -0400
parents 89c3ba37711c
children
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Chromosome	Genomes
chr	ALL	B	query
Total number of N's and -'s	1	1	0
Total percent of N's and -'s	50.00	50.00	0.00
Total number of unfiltered variants in chromosome: 2

================= Filter Summary Statistics =====================
Number of sites used to generate phylogeny: 1
Total number of sites identified: 2
Number of sites filtered: 1
Percentage of sites filtered: 50.00
Coverage filtered: 1
mpileup filtered: 0
Invalid filtered: Invalid positions not analyzed.  Please use -a flag to analyze.