0
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1 HMMER3/b [3.0 | March 2010]
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2 NAME 3_End_Chlorophyta_58S_end_eight_long
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3 LENG 45
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4 ALPH DNA
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5 RF no
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6 CS no
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7 MAP yes
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8 DATE Sat Jan 28 01:06:57 2012
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9 NSEQ 8
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10 EFFN 3.128906
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11 CKSUM 1519682346
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12 STATS LOCAL MSV -8.1109 0.71934
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13 STATS LOCAL VITERBI -7.7889 0.71934
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14 STATS LOCAL FORWARD -3.6308 0.71934
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15 HMM A C G T
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16 m->m m->i m->d i->m i->i d->m d->d
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17 COMPO 2.06483 0.95712 1.26884 1.57019
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18 1.38629 1.38629 1.38629 1.38629
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19 0.03825 3.97573 3.97573 1.46634 0.26236 0.00000 *
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20 1 3.35912 0.13939 3.41165 2.77481 1 - -
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21 1.38629 1.38629 1.38629 1.38629
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22 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
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|
23 2 2.90228 3.52232 0.12458 3.42031 2 - -
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24 1.38629 1.38629 1.38629 1.38629
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|
25 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
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|
26 3 3.35912 0.13939 3.41165 2.77481 3 - -
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27 1.38629 1.38629 1.38629 1.38629
|
|
28 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
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|
29 4 3.35912 0.13939 3.41165 2.77481 4 - -
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30 1.38629 1.38629 1.38629 1.38629
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|
31 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
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|
32 5 3.35912 0.13939 3.41165 2.77481 5 - -
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|
33 1.38629 1.38629 1.38629 1.38629
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|
34 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
35 6 3.35912 0.13939 3.41165 2.77481 6 - -
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36 1.38629 1.38629 1.38629 1.38629
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|
37 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
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|
38 7 0.15066 3.31617 2.76009 3.21184 7 - -
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|
39 1.38629 1.38629 1.38629 1.38629
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|
40 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
41 8 3.35912 0.13939 3.41165 2.77481 8 - -
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|
42 1.38629 1.38629 1.38629 1.38629
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|
43 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
44 9 2.90228 3.52232 0.12458 3.42031 9 - -
|
|
45 1.38629 1.38629 1.38629 1.38629
|
|
46 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
47 10 2.90228 3.52232 0.12458 3.42031 10 - -
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|
48 1.38629 1.38629 1.38629 1.38629
|
|
49 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
50 11 3.35912 0.13939 3.41165 2.77481 11 - -
|
|
51 1.38629 1.38629 1.38629 1.38629
|
|
52 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
53 12 3.35912 0.13939 3.41165 2.77481 12 - -
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|
54 1.38629 1.38629 1.38629 1.38629
|
|
55 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
56 13 3.02437 2.55419 3.07496 0.18939 13 - -
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|
57 1.38629 1.38629 1.38629 1.38629
|
|
58 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
59 14 3.35912 0.13939 3.41165 2.77481 14 - -
|
|
60 1.38629 1.38629 1.38629 1.38629
|
|
61 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
62 15 2.90228 3.52232 0.12458 3.42031 15 - -
|
|
63 1.38629 1.38629 1.38629 1.38629
|
|
64 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
65 16 2.90228 3.52232 0.12458 3.42031 16 - -
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|
66 1.38629 1.38629 1.38629 1.38629
|
|
67 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
68 17 3.35912 0.13939 3.41165 2.77481 17 - -
|
|
69 1.38629 1.38629 1.38629 1.38629
|
|
70 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
71 18 3.35912 0.13939 3.41165 2.77481 18 - -
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|
72 1.38629 1.38629 1.38629 1.38629
|
|
73 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
74 19 3.35912 0.13939 3.41165 2.77481 19 - -
|
|
75 1.38629 1.38629 1.38629 1.38629
|
|
76 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
77 20 0.15066 3.31617 2.76009 3.21184 20 - -
|
|
78 1.38629 1.38629 1.38629 1.38629
|
|
79 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
80 21 2.90228 3.52232 0.12458 3.42031 21 - -
|
|
81 1.38629 1.38629 1.38629 1.38629
|
|
82 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
83 22 2.90228 3.52232 0.12458 3.42031 22 - -
|
|
84 1.38629 1.38629 1.38629 1.38629
|
|
85 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
86 23 2.90228 3.52232 0.12458 3.42031 23 - -
|
|
87 1.38629 1.38629 1.38629 1.38629
|
|
88 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
89 24 3.35912 0.13939 3.41165 2.77481 24 - -
|
|
90 1.38629 1.38629 1.38629 1.38629
|
|
91 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
92 25 0.15066 3.31617 2.76009 3.21184 25 - -
|
|
93 1.38629 1.38629 1.38629 1.38629
|
|
94 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
95 26 3.02437 2.55419 3.07496 0.18939 26 - -
|
|
96 1.38629 1.38629 1.38629 1.38629
|
|
97 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
98 27 2.90228 3.52232 0.12458 3.42031 27 - -
|
|
99 1.38629 1.38629 1.38629 1.38629
|
|
100 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
101 28 3.02437 2.55419 3.07496 0.18939 28 - -
|
|
102 1.38629 1.38629 1.38629 1.38629
|
|
103 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
104 29 3.35912 0.13939 3.41165 2.77481 29 - -
|
|
105 1.38629 1.38629 1.38629 1.38629
|
|
106 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
107 30 3.02437 2.55419 3.07496 0.18939 30 - -
|
|
108 1.38629 1.38629 1.38629 1.38629
|
|
109 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
110 31 2.90228 3.52232 0.12458 3.42031 31 - -
|
|
111 1.38629 1.38629 1.38629 1.38629
|
|
112 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
113 32 3.35912 0.13939 3.41165 2.77481 32 - -
|
|
114 1.38629 1.38629 1.38629 1.38629
|
|
115 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
116 33 3.35912 0.13939 3.41165 2.77481 33 - -
|
|
117 1.38629 1.38629 1.38629 1.38629
|
|
118 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
119 34 3.02437 2.55419 3.07496 0.18939 34 - -
|
|
120 1.38629 1.38629 1.38629 1.38629
|
|
121 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
122 35 3.35912 0.13939 3.41165 2.77481 35 - -
|
|
123 1.38629 1.38629 1.38629 1.38629
|
|
124 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
125 36 0.15066 3.31617 2.76009 3.21184 36 - -
|
|
126 1.38629 1.38629 1.38629 1.38629
|
|
127 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
128 37 2.90228 3.52232 0.12458 3.42031 37 - -
|
|
129 1.38629 1.38629 1.38629 1.38629
|
|
130 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
131 38 3.35912 0.13939 3.41165 2.77481 38 - -
|
|
132 1.38629 1.38629 1.38629 1.38629
|
|
133 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
134 39 2.90228 3.52232 0.12458 3.42031 39 - -
|
|
135 1.38629 1.38629 1.38629 1.38629
|
|
136 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
137 40 3.02437 2.55419 3.07496 0.18939 40 - -
|
|
138 1.38629 1.38629 1.38629 1.38629
|
|
139 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
140 41 3.35912 0.13939 3.41165 2.77481 41 - -
|
|
141 1.38629 1.38629 1.38629 1.38629
|
|
142 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
143 42 3.02437 2.55419 3.07496 0.18939 42 - -
|
|
144 1.38629 1.38629 1.38629 1.38629
|
|
145 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
146 43 2.90228 3.52232 0.12458 3.42031 43 - -
|
|
147 1.38629 1.38629 1.38629 1.38629
|
|
148 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
149 44 3.02437 2.55419 3.07496 0.18939 44 - -
|
|
150 1.38629 1.38629 1.38629 1.38629
|
|
151 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
152 45 3.02437 2.55419 3.07496 0.18939 45 - -
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|
153 1.38629 1.38629 1.38629 1.38629
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|
154 0.01931 3.95679 * 1.46634 0.26236 0.00000 *
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155 //
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156 HMMER3/b [3.0 | March 2010]
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157 NAME 3_End_Chlorophyta_58S_end_elevena_long
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158 LENG 45
|
|
159 ALPH DNA
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|
160 RF no
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|
161 CS no
|
|
162 MAP yes
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163 DATE Sat Jan 28 01:08:11 2012
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164 NSEQ 2
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165 EFFN 2.000000
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166 CKSUM 3760142231
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|
167 STATS LOCAL MSV -7.7134 0.72708
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|
168 STATS LOCAL VITERBI -8.1835 0.72708
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169 STATS LOCAL FORWARD -2.9945 0.72708
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170 HMM A C G T
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171 m->m m->i m->d i->m i->i d->m d->d
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172 COMPO 1.66783 1.20179 1.12165 1.68770
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173 1.38629 1.38629 1.38629 1.38629
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174 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
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175 1 2.53331 3.02441 0.20344 2.88069 1 - -
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176 1.38629 1.38629 1.38629 1.38629
|
|
177 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
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|
178 2 2.81865 0.23582 2.88868 2.35662 2 - -
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|
179 1.38629 1.38629 1.38629 1.38629
|
|
180 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
181 3 2.53331 3.02441 0.20344 2.88069 3 - -
|
|
182 1.38629 1.38629 1.38629 1.38629
|
|
183 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
184 4 2.81865 0.23582 2.88868 2.35662 4 - -
|
|
185 1.38629 1.38629 1.38629 1.38629
|
|
186 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
187 5 2.81865 0.23582 2.88868 2.35662 5 - -
|
|
188 1.38629 1.38629 1.38629 1.38629
|
|
189 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
190 6 2.81865 0.23582 2.88868 2.35662 6 - -
|
|
191 1.38629 1.38629 1.38629 1.38629
|
|
192 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
193 7 2.53331 3.02441 0.20344 2.88069 7 - -
|
|
194 1.38629 1.38629 1.38629 1.38629
|
|
195 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
196 8 0.23862 2.84929 2.43386 2.70756 8 - -
|
|
197 1.38629 1.38629 1.38629 1.38629
|
|
198 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
199 9 2.53331 3.02441 0.20344 2.88069 9 - -
|
|
200 1.38629 1.38629 1.38629 1.38629
|
|
201 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
202 10 2.53331 3.02441 0.20344 2.88069 10 - -
|
|
203 1.38629 1.38629 1.38629 1.38629
|
|
204 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
205 11 2.81865 0.23582 2.88868 2.35662 11 - -
|
|
206 1.38629 1.38629 1.38629 1.38629
|
|
207 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
208 12 2.57915 2.25909 2.64442 0.28946 12 - -
|
|
209 1.38629 1.38629 1.38629 1.38629
|
|
210 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
211 13 2.57915 2.25909 2.64442 0.28946 13 - -
|
|
212 1.38629 1.38629 1.38629 1.38629
|
|
213 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
214 14 0.23862 2.84929 2.43386 2.70756 14 - -
|
|
215 1.38629 1.38629 1.38629 1.38629
|
|
216 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
217 15 2.53331 3.02441 0.20344 2.88069 15 - -
|
|
218 1.38629 1.38629 1.38629 1.38629
|
|
219 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
220 16 2.53331 3.02441 0.20344 2.88069 16 - -
|
|
221 1.38629 1.38629 1.38629 1.38629
|
|
222 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
223 17 2.81865 0.23582 2.88868 2.35662 17 - -
|
|
224 1.38629 1.38629 1.38629 1.38629
|
|
225 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
226 18 2.81865 0.23582 2.88868 2.35662 18 - -
|
|
227 1.38629 1.38629 1.38629 1.38629
|
|
228 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
229 19 0.23862 2.84929 2.43386 2.70756 19 - -
|
|
230 1.38629 1.38629 1.38629 1.38629
|
|
231 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
232 20 0.23862 2.84929 2.43386 2.70756 20 - -
|
|
233 1.38629 1.38629 1.38629 1.38629
|
|
234 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
235 21 2.53331 3.02441 0.20344 2.88069 21 - -
|
|
236 1.38629 1.38629 1.38629 1.38629
|
|
237 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
238 22 2.53331 3.02441 0.20344 2.88069 22 - -
|
|
239 1.38629 1.38629 1.38629 1.38629
|
|
240 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
241 23 2.53331 3.02441 0.20344 2.88069 23 - -
|
|
242 1.38629 1.38629 1.38629 1.38629
|
|
243 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
244 24 2.81865 0.23582 2.88868 2.35662 24 - -
|
|
245 1.38629 1.38629 1.38629 1.38629
|
|
246 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
247 25 0.23862 2.84929 2.43386 2.70756 25 - -
|
|
248 1.38629 1.38629 1.38629 1.38629
|
|
249 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
250 26 2.57915 2.25909 2.64442 0.28946 26 - -
|
|
251 1.38629 1.38629 1.38629 1.38629
|
|
252 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
253 27 2.53331 3.02441 0.20344 2.88069 27 - -
|
|
254 1.38629 1.38629 1.38629 1.38629
|
|
255 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
256 28 2.81865 0.23582 2.88868 2.35662 28 - -
|
|
257 1.38629 1.38629 1.38629 1.38629
|
|
258 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
259 29 2.81865 0.23582 2.88868 2.35662 29 - -
|
|
260 1.38629 1.38629 1.38629 1.38629
|
|
261 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
262 30 2.57915 2.25909 2.64442 0.28946 30 - -
|
|
263 1.38629 1.38629 1.38629 1.38629
|
|
264 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
265 31 2.53331 3.02441 0.20344 2.88069 31 - -
|
|
266 1.38629 1.38629 1.38629 1.38629
|
|
267 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
268 32 2.53331 3.02441 0.20344 2.88069 32 - -
|
|
269 1.38629 1.38629 1.38629 1.38629
|
|
270 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
271 33 2.81865 0.23582 2.88868 2.35662 33 - -
|
|
272 1.38629 1.38629 1.38629 1.38629
|
|
273 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
274 34 2.57915 2.25909 2.64442 0.28946 34 - -
|
|
275 1.38629 1.38629 1.38629 1.38629
|
|
276 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
277 35 2.81865 0.23582 2.88868 2.35662 35 - -
|
|
278 1.38629 1.38629 1.38629 1.38629
|
|
279 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
280 36 0.23862 2.84929 2.43386 2.70756 36 - -
|
|
281 1.38629 1.38629 1.38629 1.38629
|
|
282 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
283 37 2.53331 3.02441 0.20344 2.88069 37 - -
|
|
284 1.38629 1.38629 1.38629 1.38629
|
|
285 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
286 38 2.81865 0.23582 2.88868 2.35662 38 - -
|
|
287 1.38629 1.38629 1.38629 1.38629
|
|
288 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
289 39 2.53331 3.02441 0.20344 2.88069 39 - -
|
|
290 1.38629 1.38629 1.38629 1.38629
|
|
291 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
292 40 2.57915 2.25909 2.64442 0.28946 40 - -
|
|
293 1.38629 1.38629 1.38629 1.38629
|
|
294 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
295 41 2.81865 0.23582 2.88868 2.35662 41 - -
|
|
296 1.38629 1.38629 1.38629 1.38629
|
|
297 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
298 42 2.53331 3.02441 0.20344 2.88069 42 - -
|
|
299 1.38629 1.38629 1.38629 1.38629
|
|
300 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
301 43 2.57915 2.25909 2.64442 0.28946 43 - -
|
|
302 1.38629 1.38629 1.38629 1.38629
|
|
303 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
304 44 2.81865 0.23582 2.88868 2.35662 44 - -
|
|
305 1.38629 1.38629 1.38629 1.38629
|
|
306 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
307 45 0.23862 2.84929 2.43386 2.70756 45 - -
|
|
308 1.38629 1.38629 1.38629 1.38629
|
|
309 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
310 //
|
|
311 HMMER3/b [3.0 | March 2010]
|
|
312 NAME 3_End_Chlorophyta_58S_end_elevenb_long
|
|
313 LENG 45
|
|
314 ALPH DNA
|
|
315 RF no
|
|
316 CS no
|
|
317 MAP yes
|
|
318 DATE Sat Jan 28 01:08:17 2012
|
|
319 NSEQ 4
|
|
320 EFFN 3.167969
|
|
321 CKSUM 1059924513
|
|
322 STATS LOCAL MSV -8.1569 0.71931
|
|
323 STATS LOCAL VITERBI -7.6314 0.71931
|
|
324 STATS LOCAL FORWARD -3.5156 0.71931
|
|
325 HMM A C G T
|
|
326 m->m m->i m->d i->m i->i d->m d->d
|
|
327 COMPO 1.71647 1.25486 0.99125 1.80746
|
|
328 1.38629 1.38629 1.38629 1.38629
|
|
329 0.03797 3.98303 3.98303 1.46634 0.26236 0.00000 *
|
|
330 1 2.91173 3.53592 0.12299 3.43528 1 - -
|
|
331 1.38629 1.38629 1.38629 1.38629
|
|
332 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
333 2 3.37444 0.13743 3.42635 2.78609 2 - -
|
|
334 1.38629 1.38629 1.38629 1.38629
|
|
335 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
336 3 2.91173 3.53592 0.12299 3.43528 3 - -
|
|
337 1.38629 1.38629 1.38629 1.38629
|
|
338 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
339 4 3.37444 0.13743 3.42635 2.78609 4 - -
|
|
340 1.38629 1.38629 1.38629 1.38629
|
|
341 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
342 5 3.37444 0.13743 3.42635 2.78609 5 - -
|
|
343 1.38629 1.38629 1.38629 1.38629
|
|
344 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
345 6 3.37444 0.13743 3.42635 2.78609 6 - -
|
|
346 1.38629 1.38629 1.38629 1.38629
|
|
347 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
348 7 2.91173 3.53592 0.12299 3.43528 7 - -
|
|
349 1.38629 1.38629 1.38629 1.38629
|
|
350 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
351 8 0.14880 3.32943 2.76878 3.22633 8 - -
|
|
352 1.38629 1.38629 1.38629 1.38629
|
|
353 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
354 9 2.91173 3.53592 0.12299 3.43528 9 - -
|
|
355 1.38629 1.38629 1.38629 1.38629
|
|
356 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
357 10 2.91173 3.53592 0.12299 3.43528 10 - -
|
|
358 1.38629 1.38629 1.38629 1.38629
|
|
359 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
360 11 3.03758 2.56263 3.08768 0.18713 11 - -
|
|
361 1.38629 1.38629 1.38629 1.38629
|
|
362 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
363 12 2.37754 0.96254 2.45003 0.82323 12 - -
|
|
364 1.38629 1.38629 1.38629 1.38629
|
|
365 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
366 13 3.03758 2.56263 3.08768 0.18713 13 - -
|
|
367 1.38629 1.38629 1.38629 1.38629
|
|
368 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
369 14 0.14880 3.32943 2.76878 3.22633 14 - -
|
|
370 1.38629 1.38629 1.38629 1.38629
|
|
371 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
372 15 2.91173 3.53592 0.12299 3.43528 15 - -
|
|
373 1.38629 1.38629 1.38629 1.38629
|
|
374 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
375 16 2.91173 3.53592 0.12299 3.43528 16 - -
|
|
376 1.38629 1.38629 1.38629 1.38629
|
|
377 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
378 17 3.37444 0.13743 3.42635 2.78609 17 - -
|
|
379 1.38629 1.38629 1.38629 1.38629
|
|
380 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
381 18 3.37444 0.13743 3.42635 2.78609 18 - -
|
|
382 1.38629 1.38629 1.38629 1.38629
|
|
383 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
384 19 0.14880 3.32943 2.76878 3.22633 19 - -
|
|
385 1.38629 1.38629 1.38629 1.38629
|
|
386 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
387 20 0.14880 3.32943 2.76878 3.22633 20 - -
|
|
388 1.38629 1.38629 1.38629 1.38629
|
|
389 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
390 21 2.91173 3.53592 0.12299 3.43528 21 - -
|
|
391 1.38629 1.38629 1.38629 1.38629
|
|
392 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
393 22 2.91173 3.53592 0.12299 3.43528 22 - -
|
|
394 1.38629 1.38629 1.38629 1.38629
|
|
395 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
396 23 2.91173 3.53592 0.12299 3.43528 23 - -
|
|
397 1.38629 1.38629 1.38629 1.38629
|
|
398 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
399 24 3.37444 0.13743 3.42635 2.78609 24 - -
|
|
400 1.38629 1.38629 1.38629 1.38629
|
|
401 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
402 25 0.14880 3.32943 2.76878 3.22633 25 - -
|
|
403 1.38629 1.38629 1.38629 1.38629
|
|
404 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
405 26 3.03758 2.56263 3.08768 0.18713 26 - -
|
|
406 1.38629 1.38629 1.38629 1.38629
|
|
407 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
408 27 2.91173 3.53592 0.12299 3.43528 27 - -
|
|
409 1.38629 1.38629 1.38629 1.38629
|
|
410 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
411 28 2.91173 3.53592 0.12299 3.43528 28 - -
|
|
412 1.38629 1.38629 1.38629 1.38629
|
|
413 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
414 29 3.37444 0.13743 3.42635 2.78609 29 - -
|
|
415 1.38629 1.38629 1.38629 1.38629
|
|
416 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
417 30 3.03758 2.56263 3.08768 0.18713 30 - -
|
|
418 1.38629 1.38629 1.38629 1.38629
|
|
419 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
420 31 2.91173 3.53592 0.12299 3.43528 31 - -
|
|
421 1.38629 1.38629 1.38629 1.38629
|
|
422 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
423 32 2.91173 3.53592 0.12299 3.43528 32 - -
|
|
424 1.38629 1.38629 1.38629 1.38629
|
|
425 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
426 33 3.37444 0.13743 3.42635 2.78609 33 - -
|
|
427 1.38629 1.38629 1.38629 1.38629
|
|
428 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
429 34 3.03758 2.56263 3.08768 0.18713 34 - -
|
|
430 1.38629 1.38629 1.38629 1.38629
|
|
431 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
432 35 3.37444 0.13743 3.42635 2.78609 35 - -
|
|
433 1.38629 1.38629 1.38629 1.38629
|
|
434 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
435 36 0.14880 3.32943 2.76878 3.22633 36 - -
|
|
436 1.38629 1.38629 1.38629 1.38629
|
|
437 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
438 37 2.91173 3.53592 0.12299 3.43528 37 - -
|
|
439 1.38629 1.38629 1.38629 1.38629
|
|
440 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
441 38 3.37444 0.13743 3.42635 2.78609 38 - -
|
|
442 1.38629 1.38629 1.38629 1.38629
|
|
443 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
444 39 2.91173 3.53592 0.12299 3.43528 39 - -
|
|
445 1.38629 1.38629 1.38629 1.38629
|
|
446 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
447 40 3.03758 2.56263 3.08768 0.18713 40 - -
|
|
448 1.38629 1.38629 1.38629 1.38629
|
|
449 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
450 41 3.37444 0.13743 3.42635 2.78609 41 - -
|
|
451 1.38629 1.38629 1.38629 1.38629
|
|
452 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
453 42 2.91173 3.53592 0.12299 3.43528 42 - -
|
|
454 1.38629 1.38629 1.38629 1.38629
|
|
455 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
456 43 0.14880 3.32943 2.76878 3.22633 43 - -
|
|
457 1.38629 1.38629 1.38629 1.38629
|
|
458 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
459 44 3.37444 0.13743 3.42635 2.78609 44 - -
|
|
460 1.38629 1.38629 1.38629 1.38629
|
|
461 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
462 45 2.91173 3.53592 0.12299 3.43528 45 - -
|
|
463 1.38629 1.38629 1.38629 1.38629
|
|
464 0.01917 3.96423 * 1.46634 0.26236 0.00000 *
|
|
465 //
|
|
466 HMMER3/b [3.0 | March 2010]
|
|
467 NAME 3_End_Chlorophyta_58S_end_fifteen_long
|
|
468 LENG 45
|
|
469 ALPH DNA
|
|
470 RF no
|
|
471 CS no
|
|
472 MAP yes
|
|
473 DATE Sat Jan 28 01:09:22 2012
|
|
474 NSEQ 2
|
|
475 EFFN 2.000000
|
|
476 CKSUM 3206328775
|
|
477 STATS LOCAL MSV -7.4469 0.72804
|
|
478 STATS LOCAL VITERBI -8.2249 0.72804
|
|
479 STATS LOCAL FORWARD -3.6506 0.72804
|
|
480 HMM A C G T
|
|
481 m->m m->i m->d i->m i->i d->m d->d
|
|
482 COMPO 1.66019 1.45155 1.21279 1.27898
|
|
483 1.38629 1.38629 1.38629 1.38629
|
|
484 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
485 1 2.53331 3.02441 0.20344 2.88069 1 - -
|
|
486 1.38629 1.38629 1.38629 1.38629
|
|
487 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
488 2 2.81865 0.23582 2.88868 2.35662 2 - -
|
|
489 1.38629 1.38629 1.38629 1.38629
|
|
490 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
491 3 2.53331 3.02441 0.20344 2.88069 3 - -
|
|
492 1.38629 1.38629 1.38629 1.38629
|
|
493 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
494 4 2.81865 0.23582 2.88868 2.35662 4 - -
|
|
495 1.38629 1.38629 1.38629 1.38629
|
|
496 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
497 5 2.81865 0.23582 2.88868 2.35662 5 - -
|
|
498 1.38629 1.38629 1.38629 1.38629
|
|
499 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
500 6 2.81865 0.23582 2.88868 2.35662 6 - -
|
|
501 1.38629 1.38629 1.38629 1.38629
|
|
502 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
503 7 2.57915 2.25909 2.64442 0.28946 7 - -
|
|
504 1.38629 1.38629 1.38629 1.38629
|
|
505 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
506 8 2.57915 2.25909 2.64442 0.28946 8 - -
|
|
507 1.38629 1.38629 1.38629 1.38629
|
|
508 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
509 9 2.57915 2.25909 2.64442 0.28946 9 - -
|
|
510 1.38629 1.38629 1.38629 1.38629
|
|
511 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
512 10 2.53331 3.02441 0.20344 2.88069 10 - -
|
|
513 1.38629 1.38629 1.38629 1.38629
|
|
514 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
515 11 2.53331 3.02441 0.20344 2.88069 11 - -
|
|
516 1.38629 1.38629 1.38629 1.38629
|
|
517 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
518 12 2.57915 2.25909 2.64442 0.28946 12 - -
|
|
519 1.38629 1.38629 1.38629 1.38629
|
|
520 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
521 13 0.23862 2.84929 2.43386 2.70756 13 - -
|
|
522 1.38629 1.38629 1.38629 1.38629
|
|
523 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
524 14 2.57915 2.25909 2.64442 0.28946 14 - -
|
|
525 1.38629 1.38629 1.38629 1.38629
|
|
526 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
527 15 2.57915 2.25909 2.64442 0.28946 15 - -
|
|
528 1.38629 1.38629 1.38629 1.38629
|
|
529 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
530 16 2.81865 0.23582 2.88868 2.35662 16 - -
|
|
531 1.38629 1.38629 1.38629 1.38629
|
|
532 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
533 17 2.81865 0.23582 2.88868 2.35662 17 - -
|
|
534 1.38629 1.38629 1.38629 1.38629
|
|
535 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
536 18 2.53331 3.02441 0.20344 2.88069 18 - -
|
|
537 1.38629 1.38629 1.38629 1.38629
|
|
538 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
539 19 0.23862 2.84929 2.43386 2.70756 19 - -
|
|
540 1.38629 1.38629 1.38629 1.38629
|
|
541 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
542 20 0.23862 2.84929 2.43386 2.70756 20 - -
|
|
543 1.38629 1.38629 1.38629 1.38629
|
|
544 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
545 21 2.53331 3.02441 0.20344 2.88069 21 - -
|
|
546 1.38629 1.38629 1.38629 1.38629
|
|
547 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
548 22 2.53331 3.02441 0.20344 2.88069 22 - -
|
|
549 1.38629 1.38629 1.38629 1.38629
|
|
550 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
551 23 2.53331 3.02441 0.20344 2.88069 23 - -
|
|
552 1.38629 1.38629 1.38629 1.38629
|
|
553 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
554 24 2.81865 0.23582 2.88868 2.35662 24 - -
|
|
555 1.38629 1.38629 1.38629 1.38629
|
|
556 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
557 25 0.23862 2.84929 2.43386 2.70756 25 - -
|
|
558 1.38629 1.38629 1.38629 1.38629
|
|
559 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
560 26 2.57915 2.25909 2.64442 0.28946 26 - -
|
|
561 1.38629 1.38629 1.38629 1.38629
|
|
562 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
563 27 2.53331 3.02441 0.20344 2.88069 27 - -
|
|
564 1.38629 1.38629 1.38629 1.38629
|
|
565 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
566 28 2.81865 0.23582 2.88868 2.35662 28 - -
|
|
567 1.38629 1.38629 1.38629 1.38629
|
|
568 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
569 29 2.81865 0.23582 2.88868 2.35662 29 - -
|
|
570 1.38629 1.38629 1.38629 1.38629
|
|
571 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
572 30 2.57915 2.25909 2.64442 0.28946 30 - -
|
|
573 1.38629 1.38629 1.38629 1.38629
|
|
574 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
575 31 2.53331 3.02441 0.20344 2.88069 31 - -
|
|
576 1.38629 1.38629 1.38629 1.38629
|
|
577 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
578 32 2.57915 2.25909 2.64442 0.28946 32 - -
|
|
579 1.38629 1.38629 1.38629 1.38629
|
|
580 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
581 33 2.57915 2.25909 2.64442 0.28946 33 - -
|
|
582 1.38629 1.38629 1.38629 1.38629
|
|
583 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
584 34 2.57915 2.25909 2.64442 0.28946 34 - -
|
|
585 1.38629 1.38629 1.38629 1.38629
|
|
586 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
587 35 2.53331 3.02441 0.20344 2.88069 35 - -
|
|
588 1.38629 1.38629 1.38629 1.38629
|
|
589 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
590 36 0.23862 2.84929 2.43386 2.70756 36 - -
|
|
591 1.38629 1.38629 1.38629 1.38629
|
|
592 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
593 37 2.53331 3.02441 0.20344 2.88069 37 - -
|
|
594 1.38629 1.38629 1.38629 1.38629
|
|
595 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
596 38 2.57915 2.25909 2.64442 0.28946 38 - -
|
|
597 1.38629 1.38629 1.38629 1.38629
|
|
598 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
599 39 2.53331 3.02441 0.20344 2.88069 39 - -
|
|
600 1.38629 1.38629 1.38629 1.38629
|
|
601 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
602 40 2.57915 2.25909 2.64442 0.28946 40 - -
|
|
603 1.38629 1.38629 1.38629 1.38629
|
|
604 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
605 41 2.81865 0.23582 2.88868 2.35662 41 - -
|
|
606 1.38629 1.38629 1.38629 1.38629
|
|
607 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
608 42 0.23862 2.84929 2.43386 2.70756 42 - -
|
|
609 1.38629 1.38629 1.38629 1.38629
|
|
610 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
611 43 2.57915 2.25909 2.64442 0.28946 43 - -
|
|
612 1.38629 1.38629 1.38629 1.38629
|
|
613 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
614 44 2.53331 3.02441 0.20344 2.88069 44 - -
|
|
615 1.38629 1.38629 1.38629 1.38629
|
|
616 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
617 45 0.23862 2.84929 2.43386 2.70756 45 - -
|
|
618 1.38629 1.38629 1.38629 1.38629
|
|
619 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
620 //
|
|
621 HMMER3/b [3.0 | March 2010]
|
|
622 NAME 3_End_Chlorophyta_58S_end_five_long
|
|
623 LENG 45
|
|
624 ALPH DNA
|
|
625 RF no
|
|
626 CS no
|
|
627 MAP yes
|
|
628 DATE Sat Jan 28 01:06:30 2012
|
|
629 NSEQ 6
|
|
630 EFFN 3.219727
|
|
631 CKSUM 399550701
|
|
632 STATS LOCAL MSV -8.3017 0.71932
|
|
633 STATS LOCAL VITERBI -7.6964 0.71932
|
|
634 STATS LOCAL FORWARD -3.8371 0.71932
|
|
635 HMM A C G T
|
|
636 m->m m->i m->d i->m i->i d->m d->d
|
|
637 COMPO 1.66847 1.15405 1.18562 1.65782
|
|
638 1.38629 1.38629 1.38629 1.38629
|
|
639 0.03760 3.99263 3.99263 1.46634 0.26236 0.00000 *
|
|
640 1 2.92399 3.55362 0.12096 3.45477 1 - -
|
|
641 1.38629 1.38629 1.38629 1.38629
|
|
642 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
|
|
643 2 3.39443 0.13492 3.44551 2.80075 2 - -
|
|
644 1.38629 1.38629 1.38629 1.38629
|
|
645 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
|
|
646 3 2.92399 3.55362 0.12096 3.45477 3 - -
|
|
647 1.38629 1.38629 1.38629 1.38629
|
|
648 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
|
|
649 4 2.92399 3.55362 0.12096 3.45477 4 - -
|
|
650 1.38629 1.38629 1.38629 1.38629
|
|
651 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
|
|
652 5 3.05488 2.57367 3.10432 0.18421 5 - -
|
|
653 1.38629 1.38629 1.38629 1.38629
|
|
654 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
|
|
655 6 3.39443 0.13492 3.44551 2.80075 6 - -
|
|
656 1.38629 1.38629 1.38629 1.38629
|
|
657 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
|
|
658 7 2.92399 3.55362 0.12096 3.45477 7 - -
|
|
659 1.38629 1.38629 1.38629 1.38629
|
|
660 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
|
|
661 8 0.14640 3.34673 2.78009 3.24524 8 - -
|
|
662 1.38629 1.38629 1.38629 1.38629
|
|
663 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
|
|
664 9 2.92399 3.55362 0.12096 3.45477 9 - -
|
|
665 1.38629 1.38629 1.38629 1.38629
|
|
666 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
|
|
667 10 2.92399 3.55362 0.12096 3.45477 10 - -
|
|
668 1.38629 1.38629 1.38629 1.38629
|
|
669 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
|
|
670 11 3.39443 0.13492 3.44551 2.80075 11 - -
|
|
671 1.38629 1.38629 1.38629 1.38629
|
|
672 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
|
|
673 12 3.05488 2.57367 3.10432 0.18421 12 - -
|
|
674 1.38629 1.38629 1.38629 1.38629
|
|
675 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
|
|
676 13 3.05488 2.57367 3.10432 0.18421 13 - -
|
|
677 1.38629 1.38629 1.38629 1.38629
|
|
678 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
|
|
679 14 3.39443 0.13492 3.44551 2.80075 14 - -
|
|
680 1.38629 1.38629 1.38629 1.38629
|
|
681 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
|
|
682 15 2.92399 3.55362 0.12096 3.45477 15 - -
|
|
683 1.38629 1.38629 1.38629 1.38629
|
|
684 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
|
|
685 16 2.92399 3.55362 0.12096 3.45477 16 - -
|
|
686 1.38629 1.38629 1.38629 1.38629
|
|
687 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
|
|
688 17 3.39443 0.13492 3.44551 2.80075 17 - -
|
|
689 1.38629 1.38629 1.38629 1.38629
|
|
690 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
|
|
691 18 3.39443 0.13492 3.44551 2.80075 18 - -
|
|
692 1.38629 1.38629 1.38629 1.38629
|
|
693 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
|
|
694 19 0.52608 2.60866 1.38344 2.46821 19 - -
|
|
695 1.38629 1.38629 1.38629 1.38629
|
|
696 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
|
|
697 20 0.14640 3.34673 2.78009 3.24524 20 - -
|
|
698 1.38629 1.38629 1.38629 1.38629
|
|
699 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
|
|
700 21 2.92399 3.55362 0.12096 3.45477 21 - -
|
|
701 1.38629 1.38629 1.38629 1.38629
|
|
702 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
|
|
703 22 0.14640 3.34673 2.78009 3.24524 22 - -
|
|
704 1.38629 1.38629 1.38629 1.38629
|
|
705 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
|
|
706 23 3.39443 0.13492 3.44551 2.80075 23 - -
|
|
707 1.38629 1.38629 1.38629 1.38629
|
|
708 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
|
|
709 24 3.39443 0.13492 3.44551 2.80075 24 - -
|
|
710 1.38629 1.38629 1.38629 1.38629
|
|
711 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
|
|
712 25 0.14640 3.34673 2.78009 3.24524 25 - -
|
|
713 1.38629 1.38629 1.38629 1.38629
|
|
714 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
|
|
715 26 3.05488 2.57367 3.10432 0.18421 26 - -
|
|
716 1.38629 1.38629 1.38629 1.38629
|
|
717 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
|
|
718 27 2.92399 3.55362 0.12096 3.45477 27 - -
|
|
719 1.38629 1.38629 1.38629 1.38629
|
|
720 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
|
|
721 28 3.39443 0.13492 3.44551 2.80075 28 - -
|
|
722 1.38629 1.38629 1.38629 1.38629
|
|
723 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
|
|
724 29 3.39443 0.13492 3.44551 2.80075 29 - -
|
|
725 1.38629 1.38629 1.38629 1.38629
|
|
726 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
|
|
727 30 3.05488 2.57367 3.10432 0.18421 30 - -
|
|
728 1.38629 1.38629 1.38629 1.38629
|
|
729 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
|
|
730 31 2.92399 3.55362 0.12096 3.45477 31 - -
|
|
731 1.38629 1.38629 1.38629 1.38629
|
|
732 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
|
|
733 32 3.39443 0.13492 3.44551 2.80075 32 - -
|
|
734 1.38629 1.38629 1.38629 1.38629
|
|
735 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
|
|
736 33 3.39443 0.13492 3.44551 2.80075 33 - -
|
|
737 1.38629 1.38629 1.38629 1.38629
|
|
738 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
|
|
739 34 3.05488 2.57367 3.10432 0.18421 34 - -
|
|
740 1.38629 1.38629 1.38629 1.38629
|
|
741 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
|
|
742 35 3.39443 0.13492 3.44551 2.80075 35 - -
|
|
743 1.38629 1.38629 1.38629 1.38629
|
|
744 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
|
|
745 36 0.14640 3.34673 2.78009 3.24524 36 - -
|
|
746 1.38629 1.38629 1.38629 1.38629
|
|
747 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
|
|
748 37 2.92399 3.55362 0.12096 3.45477 37 - -
|
|
749 1.38629 1.38629 1.38629 1.38629
|
|
750 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
|
|
751 38 3.39443 0.13492 3.44551 2.80075 38 - -
|
|
752 1.38629 1.38629 1.38629 1.38629
|
|
753 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
|
|
754 39 2.92399 3.55362 0.12096 3.45477 39 - -
|
|
755 1.38629 1.38629 1.38629 1.38629
|
|
756 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
|
|
757 40 3.05488 2.57367 3.10432 0.18421 40 - -
|
|
758 1.38629 1.38629 1.38629 1.38629
|
|
759 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
|
|
760 41 3.39443 0.13492 3.44551 2.80075 41 - -
|
|
761 1.38629 1.38629 1.38629 1.38629
|
|
762 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
|
|
763 42 2.92399 3.55362 0.12096 3.45477 42 - -
|
|
764 1.38629 1.38629 1.38629 1.38629
|
|
765 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
|
|
766 43 3.05488 2.57367 3.10432 0.18421 43 - -
|
|
767 1.38629 1.38629 1.38629 1.38629
|
|
768 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
|
|
769 44 0.14640 3.34673 2.78009 3.24524 44 - -
|
|
770 1.38629 1.38629 1.38629 1.38629
|
|
771 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
|
|
772 45 0.14640 3.34673 2.78009 3.24524 45 - -
|
|
773 1.38629 1.38629 1.38629 1.38629
|
|
774 0.01898 3.97401 * 1.46634 0.26236 0.00000 *
|
|
775 //
|
|
776 HMMER3/b [3.0 | March 2010]
|
|
777 NAME 3_End_Chlorophyta_58S_end_foura_long
|
|
778 LENG 45
|
|
779 ALPH DNA
|
|
780 RF no
|
|
781 CS no
|
|
782 MAP yes
|
|
783 DATE Sat Jan 28 01:05:16 2012
|
|
784 NSEQ 52
|
|
785 EFFN 3.449951
|
|
786 CKSUM 881486621
|
|
787 STATS LOCAL MSV -7.1698 0.71931
|
|
788 STATS LOCAL VITERBI -7.5850 0.71931
|
|
789 STATS LOCAL FORWARD -3.9589 0.71931
|
|
790 HMM A C G T
|
|
791 m->m m->i m->d i->m i->i d->m d->d
|
|
792 COMPO 1.85538 1.20465 1.09209 1.56880
|
|
793 1.38629 1.38629 1.38629 1.38629
|
|
794 0.03604 4.03423 4.03423 1.46634 0.26236 0.00000 *
|
|
795 1 2.97515 3.62808 0.11284 3.53697 1 - -
|
|
796 1.38629 1.38629 1.38629 1.38629
|
|
797 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
|
|
798 2 3.47902 0.12486 3.52651 2.86230 2 - -
|
|
799 1.38629 1.38629 1.38629 1.38629
|
|
800 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
|
|
801 3 2.97515 3.62808 0.11284 3.53697 3 - -
|
|
802 1.38629 1.38629 1.38629 1.38629
|
|
803 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
|
|
804 4 3.25787 0.15953 3.10244 2.74811 4 - -
|
|
805 1.38629 1.38629 1.38629 1.38629
|
|
806 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
|
|
807 5 3.12906 2.62084 3.17566 0.17229 5 - -
|
|
808 1.38629 1.38629 1.38629 1.38629
|
|
809 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
|
|
810 6 3.30543 0.16321 3.35847 2.53684 6 - -
|
|
811 1.38629 1.38629 1.38629 1.38629
|
|
812 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
|
|
813 7 2.97515 3.62808 0.11284 3.53697 7 - -
|
|
814 1.38629 1.38629 1.38629 1.38629
|
|
815 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
|
|
816 8 0.26092 2.40692 2.57632 2.75649 8 - -
|
|
817 1.38629 1.38629 1.38629 1.38629
|
|
818 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
|
|
819 9 2.97515 3.62808 0.11284 3.53697 9 - -
|
|
820 1.38629 1.38629 1.38629 1.38629
|
|
821 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
|
|
822 10 2.97515 3.62808 0.11284 3.53697 10 - -
|
|
823 1.38629 1.38629 1.38629 1.38629
|
|
824 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
|
|
825 11 3.47902 0.12486 3.52651 2.86230 11 - -
|
|
826 1.38629 1.38629 1.38629 1.38629
|
|
827 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
|
|
828 12 2.96985 2.24779 3.02247 0.23020 12 - -
|
|
829 1.38629 1.38629 1.38629 1.38629
|
|
830 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
|
|
831 13 3.12906 2.62084 3.17566 0.17229 13 - -
|
|
832 1.38629 1.38629 1.38629 1.38629
|
|
833 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
|
|
834 14 3.47902 0.12486 3.52651 2.86230 14 - -
|
|
835 1.38629 1.38629 1.38629 1.38629
|
|
836 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
|
|
837 15 2.97515 3.62808 0.11284 3.53697 15 - -
|
|
838 1.38629 1.38629 1.38629 1.38629
|
|
839 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
|
|
840 16 2.97515 3.62808 0.11284 3.53697 16 - -
|
|
841 1.38629 1.38629 1.38629 1.38629
|
|
842 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
|
|
843 17 3.47902 0.12486 3.52651 2.86230 17 - -
|
|
844 1.38629 1.38629 1.38629 1.38629
|
|
845 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
|
|
846 18 3.26534 0.17321 3.31968 2.46875 18 - -
|
|
847 1.38629 1.38629 1.38629 1.38629
|
|
848 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
|
|
849 19 0.25046 3.05864 2.10513 2.94170 19 - -
|
|
850 1.38629 1.38629 1.38629 1.38629
|
|
851 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
|
|
852 20 0.13674 3.42016 2.82777 3.32563 20 - -
|
|
853 1.38629 1.38629 1.38629 1.38629
|
|
854 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
|
|
855 21 2.97515 3.62808 0.11284 3.53697 21 - -
|
|
856 1.38629 1.38629 1.38629 1.38629
|
|
857 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
|
|
858 22 0.17981 3.26289 2.47875 3.15944 22 - -
|
|
859 1.38629 1.38629 1.38629 1.38629
|
|
860 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
|
|
861 23 2.97515 3.62808 0.11284 3.53697 23 - -
|
|
862 1.38629 1.38629 1.38629 1.38629
|
|
863 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
|
|
864 24 3.47902 0.12486 3.52651 2.86230 24 - -
|
|
865 1.38629 1.38629 1.38629 1.38629
|
|
866 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
|
|
867 25 0.13674 3.42016 2.82777 3.32563 25 - -
|
|
868 1.38629 1.38629 1.38629 1.38629
|
|
869 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
|
|
870 26 3.12906 2.62084 3.17566 0.17229 26 - -
|
|
871 1.38629 1.38629 1.38629 1.38629
|
|
872 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
|
|
873 27 2.97515 3.62808 0.11284 3.53697 27 - -
|
|
874 1.38629 1.38629 1.38629 1.38629
|
|
875 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
|
|
876 28 3.12906 2.62084 3.17566 0.17229 28 - -
|
|
877 1.38629 1.38629 1.38629 1.38629
|
|
878 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
|
|
879 29 3.27834 0.16991 3.33226 2.49063 29 - -
|
|
880 1.38629 1.38629 1.38629 1.38629
|
|
881 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
|
|
882 30 3.12906 2.62084 3.17566 0.17229 30 - -
|
|
883 1.38629 1.38629 1.38629 1.38629
|
|
884 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
|
|
885 31 2.97515 3.62808 0.11284 3.53697 31 - -
|
|
886 1.38629 1.38629 1.38629 1.38629
|
|
887 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
|
|
888 32 3.47902 0.12486 3.52651 2.86230 32 - -
|
|
889 1.38629 1.38629 1.38629 1.38629
|
|
890 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
|
|
891 33 3.47902 0.12486 3.52651 2.86230 33 - -
|
|
892 1.38629 1.38629 1.38629 1.38629
|
|
893 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
|
|
894 34 3.12906 2.62084 3.17566 0.17229 34 - -
|
|
895 1.38629 1.38629 1.38629 1.38629
|
|
896 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
|
|
897 35 3.47902 0.12486 3.52651 2.86230 35 - -
|
|
898 1.38629 1.38629 1.38629 1.38629
|
|
899 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
|
|
900 36 0.13674 3.42016 2.82777 3.32563 36 - -
|
|
901 1.38629 1.38629 1.38629 1.38629
|
|
902 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
|
|
903 37 2.97515 3.62808 0.11284 3.53697 37 - -
|
|
904 1.38629 1.38629 1.38629 1.38629
|
|
905 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
|
|
906 38 3.47902 0.12486 3.52651 2.86230 38 - -
|
|
907 1.38629 1.38629 1.38629 1.38629
|
|
908 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
|
|
909 39 2.97515 3.62808 0.11284 3.53697 39 - -
|
|
910 1.38629 1.38629 1.38629 1.38629
|
|
911 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
|
|
912 40 3.12906 2.62084 3.17566 0.17229 40 - -
|
|
913 1.38629 1.38629 1.38629 1.38629
|
|
914 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
|
|
915 41 3.47902 0.12486 3.52651 2.86230 41 - -
|
|
916 1.38629 1.38629 1.38629 1.38629
|
|
917 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
|
|
918 42 2.97515 3.62808 0.11284 3.53697 42 - -
|
|
919 1.38629 1.38629 1.38629 1.38629
|
|
920 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
|
|
921 43 2.75118 2.78059 0.18930 3.06608 43 - -
|
|
922 1.38629 1.38629 1.38629 1.38629
|
|
923 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
|
|
924 44 2.57620 2.90019 0.27021 2.24711 44 - -
|
|
925 1.38629 1.38629 1.38629 1.38629
|
|
926 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
|
|
927 45 3.12906 2.62084 3.17566 0.17229 45 - -
|
|
928 1.38629 1.38629 1.38629 1.38629
|
|
929 0.01818 4.01637 * 1.46634 0.26236 0.00000 *
|
|
930 //
|
|
931 HMMER3/b [3.0 | March 2010]
|
|
932 NAME 3_End_Chlorophyta_58S_end_fourb_long
|
|
933 LENG 45
|
|
934 ALPH DNA
|
|
935 RF no
|
|
936 CS no
|
|
937 MAP yes
|
|
938 DATE Sat Jan 28 01:05:29 2012
|
|
939 NSEQ 17
|
|
940 EFFN 3.448975
|
|
941 CKSUM 2381245520
|
|
942 STATS LOCAL MSV -7.2708 0.71933
|
|
943 STATS LOCAL VITERBI -7.6530 0.71933
|
|
944 STATS LOCAL FORWARD -3.8073 0.71933
|
|
945 HMM A C G T
|
|
946 m->m m->i m->d i->m i->i d->m d->d
|
|
947 COMPO 2.03392 1.10636 1.05205 1.66496
|
|
948 1.38629 1.38629 1.38629 1.38629
|
|
949 0.03605 4.03406 4.03406 1.46634 0.26236 0.00000 *
|
|
950 1 2.97495 3.62778 0.11287 3.53664 1 - -
|
|
951 1.38629 1.38629 1.38629 1.38629
|
|
952 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
|
|
953 2 3.47868 0.12490 3.52618 2.86205 2 - -
|
|
954 1.38629 1.38629 1.38629 1.38629
|
|
955 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
|
|
956 3 2.97495 3.62778 0.11287 3.53664 3 - -
|
|
957 1.38629 1.38629 1.38629 1.38629
|
|
958 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
|
|
959 4 3.47868 0.12490 3.52618 2.86205 4 - -
|
|
960 1.38629 1.38629 1.38629 1.38629
|
|
961 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
|
|
962 5 3.47868 0.12490 3.52618 2.86205 5 - -
|
|
963 1.38629 1.38629 1.38629 1.38629
|
|
964 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
|
|
965 6 3.47868 0.12490 3.52618 2.86205 6 - -
|
|
966 1.38629 1.38629 1.38629 1.38629
|
|
967 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
|
|
968 7 1.76223 2.91429 0.33941 2.78215 7 - -
|
|
969 1.38629 1.38629 1.38629 1.38629
|
|
970 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
|
|
971 8 0.13678 3.41986 2.82758 3.32530 8 - -
|
|
972 1.38629 1.38629 1.38629 1.38629
|
|
973 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
|
|
974 9 2.97495 3.62778 0.11287 3.53664 9 - -
|
|
975 1.38629 1.38629 1.38629 1.38629
|
|
976 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
|
|
977 10 2.97495 3.62778 0.11287 3.53664 10 - -
|
|
978 1.38629 1.38629 1.38629 1.38629
|
|
979 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
|
|
980 11 3.47868 0.12490 3.52618 2.86205 11 - -
|
|
981 1.38629 1.38629 1.38629 1.38629
|
|
982 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
|
|
983 12 2.85079 2.00388 2.90799 0.28395 12 - -
|
|
984 1.38629 1.38629 1.38629 1.38629
|
|
985 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
|
|
986 13 2.83058 1.96405 2.88853 0.29427 13 - -
|
|
987 1.38629 1.38629 1.38629 1.38629
|
|
988 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
|
|
989 14 3.47868 0.12490 3.52618 2.86205 14 - -
|
|
990 1.38629 1.38629 1.38629 1.38629
|
|
991 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
|
|
992 15 2.97495 3.62778 0.11287 3.53664 15 - -
|
|
993 1.38629 1.38629 1.38629 1.38629
|
|
994 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
|
|
995 16 2.97495 3.62778 0.11287 3.53664 16 - -
|
|
996 1.38629 1.38629 1.38629 1.38629
|
|
997 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
|
|
998 17 3.47868 0.12490 3.52618 2.86205 17 - -
|
|
999 1.38629 1.38629 1.38629 1.38629
|
|
1000 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
|
|
1001 18 3.47868 0.12490 3.52618 2.86205 18 - -
|
|
1002 1.38629 1.38629 1.38629 1.38629
|
|
1003 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
|
|
1004 19 2.24921 3.23380 0.20964 3.11822 19 - -
|
|
1005 1.38629 1.38629 1.38629 1.38629
|
|
1006 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
|
|
1007 20 0.13678 3.41986 2.82758 3.32530 20 - -
|
|
1008 1.38629 1.38629 1.38629 1.38629
|
|
1009 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
|
|
1010 21 2.97495 3.62778 0.11287 3.53664 21 - -
|
|
1011 1.38629 1.38629 1.38629 1.38629
|
|
1012 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
|
|
1013 22 2.97495 3.62778 0.11287 3.53664 22 - -
|
|
1014 1.38629 1.38629 1.38629 1.38629
|
|
1015 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
|
|
1016 23 2.97495 3.62778 0.11287 3.53664 23 - -
|
|
1017 1.38629 1.38629 1.38629 1.38629
|
|
1018 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
|
|
1019 24 3.47868 0.12490 3.52618 2.86205 24 - -
|
|
1020 1.38629 1.38629 1.38629 1.38629
|
|
1021 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
|
|
1022 25 0.13678 3.41986 2.82758 3.32530 25 - -
|
|
1023 1.38629 1.38629 1.38629 1.38629
|
|
1024 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
|
|
1025 26 3.12876 2.62065 3.17537 0.17234 26 - -
|
|
1026 1.38629 1.38629 1.38629 1.38629
|
|
1027 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
|
|
1028 27 2.97495 3.62778 0.11287 3.53664 27 - -
|
|
1029 1.38629 1.38629 1.38629 1.38629
|
|
1030 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
|
|
1031 28 2.83058 1.96405 2.88853 0.29427 28 - -
|
|
1032 1.38629 1.38629 1.38629 1.38629
|
|
1033 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
|
|
1034 29 3.47868 0.12490 3.52618 2.86205 29 - -
|
|
1035 1.38629 1.38629 1.38629 1.38629
|
|
1036 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
|
|
1037 30 3.12876 2.62065 3.17537 0.17234 30 - -
|
|
1038 1.38629 1.38629 1.38629 1.38629
|
|
1039 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
|
|
1040 31 2.97495 3.62778 0.11287 3.53664 31 - -
|
|
1041 1.38629 1.38629 1.38629 1.38629
|
|
1042 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
|
|
1043 32 3.47868 0.12490 3.52618 2.86205 32 - -
|
|
1044 1.38629 1.38629 1.38629 1.38629
|
|
1045 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
|
|
1046 33 3.47868 0.12490 3.52618 2.86205 33 - -
|
|
1047 1.38629 1.38629 1.38629 1.38629
|
|
1048 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
|
|
1049 34 3.12876 2.62065 3.17537 0.17234 34 - -
|
|
1050 1.38629 1.38629 1.38629 1.38629
|
|
1051 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
|
|
1052 35 3.47868 0.12490 3.52618 2.86205 35 - -
|
|
1053 1.38629 1.38629 1.38629 1.38629
|
|
1054 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
|
|
1055 36 0.13678 3.41986 2.82758 3.32530 36 - -
|
|
1056 1.38629 1.38629 1.38629 1.38629
|
|
1057 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
|
|
1058 37 2.97495 3.62778 0.11287 3.53664 37 - -
|
|
1059 1.38629 1.38629 1.38629 1.38629
|
|
1060 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
|
|
1061 38 3.47868 0.12490 3.52618 2.86205 38 - -
|
|
1062 1.38629 1.38629 1.38629 1.38629
|
|
1063 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
|
|
1064 39 2.97495 3.62778 0.11287 3.53664 39 - -
|
|
1065 1.38629 1.38629 1.38629 1.38629
|
|
1066 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
|
|
1067 40 3.12876 2.62065 3.17537 0.17234 40 - -
|
|
1068 1.38629 1.38629 1.38629 1.38629
|
|
1069 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
|
|
1070 41 3.47868 0.12490 3.52618 2.86205 41 - -
|
|
1071 1.38629 1.38629 1.38629 1.38629
|
|
1072 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
|
|
1073 42 2.97495 3.62778 0.11287 3.53664 42 - -
|
|
1074 1.38629 1.38629 1.38629 1.38629
|
|
1075 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
|
|
1076 43 2.97495 3.62778 0.11287 3.53664 43 - -
|
|
1077 1.38629 1.38629 1.38629 1.38629
|
|
1078 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
|
|
1079 44 2.48929 0.64910 2.56125 1.14788 44 - -
|
|
1080 1.38629 1.38629 1.38629 1.38629
|
|
1081 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
|
|
1082 45 3.12876 2.62065 3.17537 0.17234 45 - -
|
|
1083 1.38629 1.38629 1.38629 1.38629
|
|
1084 0.01819 4.01620 * 1.46634 0.26236 0.00000 *
|
|
1085 //
|
|
1086 HMMER3/b [3.0 | March 2010]
|
|
1087 NAME 3_End_Chlorophyta_58S_end_fourc_long
|
|
1088 LENG 45
|
|
1089 ALPH DNA
|
|
1090 RF no
|
|
1091 CS no
|
|
1092 MAP yes
|
|
1093 DATE Sat Jan 28 01:05:38 2012
|
|
1094 NSEQ 2
|
|
1095 EFFN 2.000000
|
|
1096 CKSUM 4033476049
|
|
1097 STATS LOCAL MSV -7.5612 0.72774
|
|
1098 STATS LOCAL VITERBI -8.2475 0.72774
|
|
1099 STATS LOCAL FORWARD -3.2348 0.72774
|
|
1100 HMM A C G T
|
|
1101 m->m m->i m->d i->m i->i d->m d->d
|
|
1102 COMPO 1.92209 1.13184 1.12344 1.57940
|
|
1103 1.38629 1.38629 1.38629 1.38629
|
|
1104 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
1105 1 2.53331 3.02441 0.20344 2.88069 1 - -
|
|
1106 1.38629 1.38629 1.38629 1.38629
|
|
1107 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1108 2 2.81865 0.23582 2.88868 2.35662 2 - -
|
|
1109 1.38629 1.38629 1.38629 1.38629
|
|
1110 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1111 3 2.53331 3.02441 0.20344 2.88069 3 - -
|
|
1112 1.38629 1.38629 1.38629 1.38629
|
|
1113 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1114 4 2.81865 0.23582 2.88868 2.35662 4 - -
|
|
1115 1.38629 1.38629 1.38629 1.38629
|
|
1116 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1117 5 2.81865 0.23582 2.88868 2.35662 5 - -
|
|
1118 1.38629 1.38629 1.38629 1.38629
|
|
1119 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1120 6 2.81865 0.23582 2.88868 2.35662 6 - -
|
|
1121 1.38629 1.38629 1.38629 1.38629
|
|
1122 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1123 7 2.53331 3.02441 0.20344 2.88069 7 - -
|
|
1124 1.38629 1.38629 1.38629 1.38629
|
|
1125 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1126 8 2.81865 0.23582 2.88868 2.35662 8 - -
|
|
1127 1.38629 1.38629 1.38629 1.38629
|
|
1128 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1129 9 2.53331 3.02441 0.20344 2.88069 9 - -
|
|
1130 1.38629 1.38629 1.38629 1.38629
|
|
1131 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1132 10 2.53331 3.02441 0.20344 2.88069 10 - -
|
|
1133 1.38629 1.38629 1.38629 1.38629
|
|
1134 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1135 11 2.81865 0.23582 2.88868 2.35662 11 - -
|
|
1136 1.38629 1.38629 1.38629 1.38629
|
|
1137 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1138 12 2.57915 2.25909 2.64442 0.28946 12 - -
|
|
1139 1.38629 1.38629 1.38629 1.38629
|
|
1140 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1141 13 2.81865 0.23582 2.88868 2.35662 13 - -
|
|
1142 1.38629 1.38629 1.38629 1.38629
|
|
1143 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1144 14 2.81865 0.23582 2.88868 2.35662 14 - -
|
|
1145 1.38629 1.38629 1.38629 1.38629
|
|
1146 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1147 15 2.53331 3.02441 0.20344 2.88069 15 - -
|
|
1148 1.38629 1.38629 1.38629 1.38629
|
|
1149 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1150 16 2.53331 3.02441 0.20344 2.88069 16 - -
|
|
1151 1.38629 1.38629 1.38629 1.38629
|
|
1152 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1153 17 2.81865 0.23582 2.88868 2.35662 17 - -
|
|
1154 1.38629 1.38629 1.38629 1.38629
|
|
1155 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1156 18 2.57915 2.25909 2.64442 0.28946 18 - -
|
|
1157 1.38629 1.38629 1.38629 1.38629
|
|
1158 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1159 19 0.23862 2.84929 2.43386 2.70756 19 - -
|
|
1160 1.38629 1.38629 1.38629 1.38629
|
|
1161 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1162 20 0.23862 2.84929 2.43386 2.70756 20 - -
|
|
1163 1.38629 1.38629 1.38629 1.38629
|
|
1164 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1165 21 2.53331 3.02441 0.20344 2.88069 21 - -
|
|
1166 1.38629 1.38629 1.38629 1.38629
|
|
1167 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1168 22 2.53331 3.02441 0.20344 2.88069 22 - -
|
|
1169 1.38629 1.38629 1.38629 1.38629
|
|
1170 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1171 23 2.53331 3.02441 0.20344 2.88069 23 - -
|
|
1172 1.38629 1.38629 1.38629 1.38629
|
|
1173 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1174 24 2.81865 0.23582 2.88868 2.35662 24 - -
|
|
1175 1.38629 1.38629 1.38629 1.38629
|
|
1176 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1177 25 0.23862 2.84929 2.43386 2.70756 25 - -
|
|
1178 1.38629 1.38629 1.38629 1.38629
|
|
1179 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1180 26 2.57915 2.25909 2.64442 0.28946 26 - -
|
|
1181 1.38629 1.38629 1.38629 1.38629
|
|
1182 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1183 27 2.53331 3.02441 0.20344 2.88069 27 - -
|
|
1184 1.38629 1.38629 1.38629 1.38629
|
|
1185 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1186 28 2.57915 2.25909 2.64442 0.28946 28 - -
|
|
1187 1.38629 1.38629 1.38629 1.38629
|
|
1188 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1189 29 2.81865 0.23582 2.88868 2.35662 29 - -
|
|
1190 1.38629 1.38629 1.38629 1.38629
|
|
1191 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1192 30 2.57915 2.25909 2.64442 0.28946 30 - -
|
|
1193 1.38629 1.38629 1.38629 1.38629
|
|
1194 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1195 31 2.53331 3.02441 0.20344 2.88069 31 - -
|
|
1196 1.38629 1.38629 1.38629 1.38629
|
|
1197 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1198 32 2.81865 0.23582 2.88868 2.35662 32 - -
|
|
1199 1.38629 1.38629 1.38629 1.38629
|
|
1200 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1201 33 2.81865 0.23582 2.88868 2.35662 33 - -
|
|
1202 1.38629 1.38629 1.38629 1.38629
|
|
1203 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1204 34 2.57915 2.25909 2.64442 0.28946 34 - -
|
|
1205 1.38629 1.38629 1.38629 1.38629
|
|
1206 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1207 35 2.81865 0.23582 2.88868 2.35662 35 - -
|
|
1208 1.38629 1.38629 1.38629 1.38629
|
|
1209 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1210 36 0.23862 2.84929 2.43386 2.70756 36 - -
|
|
1211 1.38629 1.38629 1.38629 1.38629
|
|
1212 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1213 37 2.53331 3.02441 0.20344 2.88069 37 - -
|
|
1214 1.38629 1.38629 1.38629 1.38629
|
|
1215 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1216 38 2.81865 0.23582 2.88868 2.35662 38 - -
|
|
1217 1.38629 1.38629 1.38629 1.38629
|
|
1218 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1219 39 2.53331 3.02441 0.20344 2.88069 39 - -
|
|
1220 1.38629 1.38629 1.38629 1.38629
|
|
1221 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1222 40 2.57915 2.25909 2.64442 0.28946 40 - -
|
|
1223 1.38629 1.38629 1.38629 1.38629
|
|
1224 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1225 41 2.81865 0.23582 2.88868 2.35662 41 - -
|
|
1226 1.38629 1.38629 1.38629 1.38629
|
|
1227 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1228 42 2.53331 3.02441 0.20344 2.88069 42 - -
|
|
1229 1.38629 1.38629 1.38629 1.38629
|
|
1230 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1231 43 2.53331 3.02441 0.20344 2.88069 43 - -
|
|
1232 1.38629 1.38629 1.38629 1.38629
|
|
1233 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1234 44 2.15554 1.00938 2.23102 0.88601 44 - -
|
|
1235 1.38629 1.38629 1.38629 1.38629
|
|
1236 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1237 45 2.57915 2.25909 2.64442 0.28946 45 - -
|
|
1238 1.38629 1.38629 1.38629 1.38629
|
|
1239 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
1240 //
|
|
1241 HMMER3/b [3.0 | March 2010]
|
|
1242 NAME 3_End_Chlorophyta_58S_end_fourd_long
|
|
1243 LENG 45
|
|
1244 ALPH DNA
|
|
1245 RF no
|
|
1246 CS no
|
|
1247 MAP yes
|
|
1248 DATE Sat Jan 28 01:05:44 2012
|
|
1249 NSEQ 37
|
|
1250 EFFN 3.491333
|
|
1251 CKSUM 4193891022
|
|
1252 STATS LOCAL MSV -7.3473 0.71933
|
|
1253 STATS LOCAL VITERBI -7.6159 0.71933
|
|
1254 STATS LOCAL FORWARD -3.6748 0.71933
|
|
1255 HMM A C G T
|
|
1256 m->m m->i m->d i->m i->i d->m d->d
|
|
1257 COMPO 1.81457 1.15055 1.12962 1.62216
|
|
1258 1.38629 1.38629 1.38629 1.38629
|
|
1259 0.03577 4.04153 4.04153 1.46634 0.26236 0.00000 *
|
|
1260 1 2.98381 3.64076 0.11152 3.55100 1 - -
|
|
1261 1.38629 1.38629 1.38629 1.38629
|
|
1262 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
|
|
1263 2 3.49351 0.12323 3.54036 2.87276 2 - -
|
|
1264 1.38629 1.38629 1.38629 1.38629
|
|
1265 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
|
|
1266 3 2.98381 3.64076 0.11152 3.55100 3 - -
|
|
1267 1.38629 1.38629 1.38629 1.38629
|
|
1268 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
|
|
1269 4 3.49351 0.12323 3.54036 2.87276 4 - -
|
|
1270 1.38629 1.38629 1.38629 1.38629
|
|
1271 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
|
|
1272 5 3.14193 2.62901 3.18803 0.17032 5 - -
|
|
1273 1.38629 1.38629 1.38629 1.38629
|
|
1274 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
|
|
1275 6 3.06128 0.23563 3.12175 2.12847 6 - -
|
|
1276 1.38629 1.38629 1.38629 1.38629
|
|
1277 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
|
|
1278 7 2.98381 3.64076 0.11152 3.55100 7 - -
|
|
1279 1.38629 1.38629 1.38629 1.38629
|
|
1280 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
|
|
1281 8 0.13515 3.43277 2.83592 3.33945 8 - -
|
|
1282 1.38629 1.38629 1.38629 1.38629
|
|
1283 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
|
|
1284 9 2.98381 3.64076 0.11152 3.55100 9 - -
|
|
1285 1.38629 1.38629 1.38629 1.38629
|
|
1286 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
|
|
1287 10 2.36747 3.31821 0.18678 3.20795 10 - -
|
|
1288 1.38629 1.38629 1.38629 1.38629
|
|
1289 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
|
|
1290 11 3.49351 0.12323 3.54036 2.87276 11 - -
|
|
1291 1.38629 1.38629 1.38629 1.38629
|
|
1292 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
|
|
1293 12 2.58532 0.51894 2.65603 1.34996 12 - -
|
|
1294 1.38629 1.38629 1.38629 1.38629
|
|
1295 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
|
|
1296 13 3.14193 2.62901 3.18803 0.17032 13 - -
|
|
1297 1.38629 1.38629 1.38629 1.38629
|
|
1298 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
|
|
1299 14 3.35284 0.15345 3.40426 2.60314 14 - -
|
|
1300 1.38629 1.38629 1.38629 1.38629
|
|
1301 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
|
|
1302 15 2.98381 3.64076 0.11152 3.55100 15 - -
|
|
1303 1.38629 1.38629 1.38629 1.38629
|
|
1304 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
|
|
1305 16 2.98381 3.64076 0.11152 3.55100 16 - -
|
|
1306 1.38629 1.38629 1.38629 1.38629
|
|
1307 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
|
|
1308 17 3.12324 0.21522 3.18195 2.22456 17 - -
|
|
1309 1.38629 1.38629 1.38629 1.38629
|
|
1310 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
|
|
1311 18 3.49351 0.12323 3.54036 2.87276 18 - -
|
|
1312 1.38629 1.38629 1.38629 1.38629
|
|
1313 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
|
|
1314 19 0.13515 3.43277 2.83592 3.33945 19 - -
|
|
1315 1.38629 1.38629 1.38629 1.38629
|
|
1316 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
|
|
1317 20 0.13515 3.43277 2.83592 3.33945 20 - -
|
|
1318 1.38629 1.38629 1.38629 1.38629
|
|
1319 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
|
|
1320 21 2.98381 3.64076 0.11152 3.55100 21 - -
|
|
1321 1.38629 1.38629 1.38629 1.38629
|
|
1322 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
|
|
1323 22 0.13515 3.43277 2.83592 3.33945 22 - -
|
|
1324 1.38629 1.38629 1.38629 1.38629
|
|
1325 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
|
|
1326 23 2.98381 3.64076 0.11152 3.55100 23 - -
|
|
1327 1.38629 1.38629 1.38629 1.38629
|
|
1328 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
|
|
1329 24 3.49351 0.12323 3.54036 2.87276 24 - -
|
|
1330 1.38629 1.38629 1.38629 1.38629
|
|
1331 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
|
|
1332 25 0.13515 3.43277 2.83592 3.33945 25 - -
|
|
1333 1.38629 1.38629 1.38629 1.38629
|
|
1334 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
|
|
1335 26 3.14193 2.62901 3.18803 0.17032 26 - -
|
|
1336 1.38629 1.38629 1.38629 1.38629
|
|
1337 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
|
|
1338 27 2.98381 3.64076 0.11152 3.55100 27 - -
|
|
1339 1.38629 1.38629 1.38629 1.38629
|
|
1340 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
|
|
1341 28 3.14193 2.62901 3.18803 0.17032 28 - -
|
|
1342 1.38629 1.38629 1.38629 1.38629
|
|
1343 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
|
|
1344 29 3.49351 0.12323 3.54036 2.87276 29 - -
|
|
1345 1.38629 1.38629 1.38629 1.38629
|
|
1346 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
|
|
1347 30 3.14193 2.62901 3.18803 0.17032 30 - -
|
|
1348 1.38629 1.38629 1.38629 1.38629
|
|
1349 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
|
|
1350 31 2.98381 3.64076 0.11152 3.55100 31 - -
|
|
1351 1.38629 1.38629 1.38629 1.38629
|
|
1352 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
|
|
1353 32 2.20534 0.64774 1.42928 2.06296 32 - -
|
|
1354 1.38629 1.38629 1.38629 1.38629
|
|
1355 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
|
|
1356 33 3.49351 0.12323 3.54036 2.87276 33 - -
|
|
1357 1.38629 1.38629 1.38629 1.38629
|
|
1358 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
|
|
1359 34 3.14193 2.62901 3.18803 0.17032 34 - -
|
|
1360 1.38629 1.38629 1.38629 1.38629
|
|
1361 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
|
|
1362 35 3.49351 0.12323 3.54036 2.87276 35 - -
|
|
1363 1.38629 1.38629 1.38629 1.38629
|
|
1364 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
|
|
1365 36 0.13515 3.43277 2.83592 3.33945 36 - -
|
|
1366 1.38629 1.38629 1.38629 1.38629
|
|
1367 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
|
|
1368 37 2.98381 3.64076 0.11152 3.55100 37 - -
|
|
1369 1.38629 1.38629 1.38629 1.38629
|
|
1370 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
|
|
1371 38 3.49351 0.12323 3.54036 2.87276 38 - -
|
|
1372 1.38629 1.38629 1.38629 1.38629
|
|
1373 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
|
|
1374 39 2.98381 3.64076 0.11152 3.55100 39 - -
|
|
1375 1.38629 1.38629 1.38629 1.38629
|
|
1376 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
|
|
1377 40 3.14193 2.62901 3.18803 0.17032 40 - -
|
|
1378 1.38629 1.38629 1.38629 1.38629
|
|
1379 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
|
|
1380 41 3.49351 0.12323 3.54036 2.87276 41 - -
|
|
1381 1.38629 1.38629 1.38629 1.38629
|
|
1382 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
|
|
1383 42 2.98381 3.64076 0.11152 3.55100 42 - -
|
|
1384 1.38629 1.38629 1.38629 1.38629
|
|
1385 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
|
|
1386 43 2.98381 3.64076 0.11152 3.55100 43 - -
|
|
1387 1.38629 1.38629 1.38629 1.38629
|
|
1388 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
|
|
1389 44 3.49351 0.12323 3.54036 2.87276 44 - -
|
|
1390 1.38629 1.38629 1.38629 1.38629
|
|
1391 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
|
|
1392 45 3.14193 2.62901 3.18803 0.17032 45 - -
|
|
1393 1.38629 1.38629 1.38629 1.38629
|
|
1394 0.01805 4.02380 * 1.46634 0.26236 0.00000 *
|
|
1395 //
|
|
1396 HMMER3/b [3.0 | March 2010]
|
|
1397 NAME 3_End_Chlorophyta_58S_end_foure_long
|
|
1398 LENG 45
|
|
1399 ALPH DNA
|
|
1400 RF no
|
|
1401 CS no
|
|
1402 MAP yes
|
|
1403 DATE Sat Jan 28 01:05:49 2012
|
|
1404 NSEQ 2
|
|
1405 EFFN 2.000000
|
|
1406 CKSUM 3417266488
|
|
1407 STATS LOCAL MSV -7.7330 0.72754
|
|
1408 STATS LOCAL VITERBI -8.2607 0.72754
|
|
1409 STATS LOCAL FORWARD -3.0985 0.72754
|
|
1410 HMM A C G T
|
|
1411 m->m m->i m->d i->m i->i d->m d->d
|
|
1412 COMPO 1.59465 1.19407 1.26934 1.54638
|
|
1413 1.38629 1.38629 1.38629 1.38629
|
|
1414 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
1415 1 2.53331 3.02441 0.20344 2.88069 1 - -
|
|
1416 1.38629 1.38629 1.38629 1.38629
|
|
1417 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1418 2 2.81865 0.23582 2.88868 2.35662 2 - -
|
|
1419 1.38629 1.38629 1.38629 1.38629
|
|
1420 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1421 3 0.23862 2.84929 2.43386 2.70756 3 - -
|
|
1422 1.38629 1.38629 1.38629 1.38629
|
|
1423 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1424 4 2.81865 0.23582 2.88868 2.35662 4 - -
|
|
1425 1.38629 1.38629 1.38629 1.38629
|
|
1426 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1427 5 2.57915 2.25909 2.64442 0.28946 5 - -
|
|
1428 1.38629 1.38629 1.38629 1.38629
|
|
1429 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1430 6 2.81865 0.23582 2.88868 2.35662 6 - -
|
|
1431 1.38629 1.38629 1.38629 1.38629
|
|
1432 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1433 7 2.53331 3.02441 0.20344 2.88069 7 - -
|
|
1434 1.38629 1.38629 1.38629 1.38629
|
|
1435 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1436 8 0.23862 2.84929 2.43386 2.70756 8 - -
|
|
1437 1.38629 1.38629 1.38629 1.38629
|
|
1438 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1439 9 2.53331 3.02441 0.20344 2.88069 9 - -
|
|
1440 1.38629 1.38629 1.38629 1.38629
|
|
1441 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1442 10 2.53331 3.02441 0.20344 2.88069 10 - -
|
|
1443 1.38629 1.38629 1.38629 1.38629
|
|
1444 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1445 11 2.81865 0.23582 2.88868 2.35662 11 - -
|
|
1446 1.38629 1.38629 1.38629 1.38629
|
|
1447 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1448 12 2.81865 0.23582 2.88868 2.35662 12 - -
|
|
1449 1.38629 1.38629 1.38629 1.38629
|
|
1450 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1451 13 2.57915 2.25909 2.64442 0.28946 13 - -
|
|
1452 1.38629 1.38629 1.38629 1.38629
|
|
1453 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1454 14 2.81865 0.23582 2.88868 2.35662 14 - -
|
|
1455 1.38629 1.38629 1.38629 1.38629
|
|
1456 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1457 15 2.53331 3.02441 0.20344 2.88069 15 - -
|
|
1458 1.38629 1.38629 1.38629 1.38629
|
|
1459 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1460 16 2.53331 3.02441 0.20344 2.88069 16 - -
|
|
1461 1.38629 1.38629 1.38629 1.38629
|
|
1462 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1463 17 2.81865 0.23582 2.88868 2.35662 17 - -
|
|
1464 1.38629 1.38629 1.38629 1.38629
|
|
1465 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1466 18 2.81865 0.23582 2.88868 2.35662 18 - -
|
|
1467 1.38629 1.38629 1.38629 1.38629
|
|
1468 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1469 19 0.23862 2.84929 2.43386 2.70756 19 - -
|
|
1470 1.38629 1.38629 1.38629 1.38629
|
|
1471 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1472 20 0.23862 2.84929 2.43386 2.70756 20 - -
|
|
1473 1.38629 1.38629 1.38629 1.38629
|
|
1474 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1475 21 2.53331 3.02441 0.20344 2.88069 21 - -
|
|
1476 1.38629 1.38629 1.38629 1.38629
|
|
1477 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1478 22 0.23862 2.84929 2.43386 2.70756 22 - -
|
|
1479 1.38629 1.38629 1.38629 1.38629
|
|
1480 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1481 23 2.53331 3.02441 0.20344 2.88069 23 - -
|
|
1482 1.38629 1.38629 1.38629 1.38629
|
|
1483 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1484 24 2.57915 2.25909 2.64442 0.28946 24 - -
|
|
1485 1.38629 1.38629 1.38629 1.38629
|
|
1486 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1487 25 0.23862 2.84929 2.43386 2.70756 25 - -
|
|
1488 1.38629 1.38629 1.38629 1.38629
|
|
1489 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1490 26 2.57915 2.25909 2.64442 0.28946 26 - -
|
|
1491 1.38629 1.38629 1.38629 1.38629
|
|
1492 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1493 27 2.53331 3.02441 0.20344 2.88069 27 - -
|
|
1494 1.38629 1.38629 1.38629 1.38629
|
|
1495 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1496 28 2.81865 0.23582 2.88868 2.35662 28 - -
|
|
1497 1.38629 1.38629 1.38629 1.38629
|
|
1498 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1499 29 2.81865 0.23582 2.88868 2.35662 29 - -
|
|
1500 1.38629 1.38629 1.38629 1.38629
|
|
1501 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1502 30 2.57915 2.25909 2.64442 0.28946 30 - -
|
|
1503 1.38629 1.38629 1.38629 1.38629
|
|
1504 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1505 31 2.53331 3.02441 0.20344 2.88069 31 - -
|
|
1506 1.38629 1.38629 1.38629 1.38629
|
|
1507 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1508 32 2.57915 2.25909 2.64442 0.28946 32 - -
|
|
1509 1.38629 1.38629 1.38629 1.38629
|
|
1510 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1511 33 2.81865 0.23582 2.88868 2.35662 33 - -
|
|
1512 1.38629 1.38629 1.38629 1.38629
|
|
1513 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1514 34 2.57915 2.25909 2.64442 0.28946 34 - -
|
|
1515 1.38629 1.38629 1.38629 1.38629
|
|
1516 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1517 35 2.81865 0.23582 2.88868 2.35662 35 - -
|
|
1518 1.38629 1.38629 1.38629 1.38629
|
|
1519 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1520 36 0.23862 2.84929 2.43386 2.70756 36 - -
|
|
1521 1.38629 1.38629 1.38629 1.38629
|
|
1522 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1523 37 2.53331 3.02441 0.20344 2.88069 37 - -
|
|
1524 1.38629 1.38629 1.38629 1.38629
|
|
1525 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1526 38 2.81865 0.23582 2.88868 2.35662 38 - -
|
|
1527 1.38629 1.38629 1.38629 1.38629
|
|
1528 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1529 39 2.53331 3.02441 0.20344 2.88069 39 - -
|
|
1530 1.38629 1.38629 1.38629 1.38629
|
|
1531 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1532 40 2.57915 2.25909 2.64442 0.28946 40 - -
|
|
1533 1.38629 1.38629 1.38629 1.38629
|
|
1534 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1535 41 2.81865 0.23582 2.88868 2.35662 41 - -
|
|
1536 1.38629 1.38629 1.38629 1.38629
|
|
1537 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1538 42 0.23862 2.84929 2.43386 2.70756 42 - -
|
|
1539 1.38629 1.38629 1.38629 1.38629
|
|
1540 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1541 43 2.53331 3.02441 0.20344 2.88069 43 - -
|
|
1542 1.38629 1.38629 1.38629 1.38629
|
|
1543 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1544 44 2.81865 0.23582 2.88868 2.35662 44 - -
|
|
1545 1.38629 1.38629 1.38629 1.38629
|
|
1546 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1547 45 2.57915 2.25909 2.64442 0.28946 45 - -
|
|
1548 1.38629 1.38629 1.38629 1.38629
|
|
1549 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
1550 //
|
|
1551 HMMER3/b [3.0 | March 2010]
|
|
1552 NAME 3_End_Chlorophyta_58S_end_fourf_long
|
|
1553 LENG 45
|
|
1554 ALPH DNA
|
|
1555 RF no
|
|
1556 CS no
|
|
1557 MAP yes
|
|
1558 DATE Sat Jan 28 01:06:00 2012
|
|
1559 NSEQ 8
|
|
1560 EFFN 3.167969
|
|
1561 CKSUM 3434890060
|
|
1562 STATS LOCAL MSV -8.1024 0.71933
|
|
1563 STATS LOCAL VITERBI -7.7981 0.71933
|
|
1564 STATS LOCAL FORWARD -4.1734 0.71933
|
|
1565 HMM A C G T
|
|
1566 m->m m->i m->d i->m i->i d->m d->d
|
|
1567 COMPO 1.92630 1.26262 1.04226 1.51985
|
|
1568 1.38629 1.38629 1.38629 1.38629
|
|
1569 0.03797 3.98303 3.98303 1.46634 0.26236 0.00000 *
|
|
1570 1 2.91173 3.53592 0.12299 3.43528 1 - -
|
|
1571 1.38629 1.38629 1.38629 1.38629
|
|
1572 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
1573 2 3.37444 0.13743 3.42635 2.78609 2 - -
|
|
1574 1.38629 1.38629 1.38629 1.38629
|
|
1575 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
1576 3 2.91173 3.53592 0.12299 3.43528 3 - -
|
|
1577 1.38629 1.38629 1.38629 1.38629
|
|
1578 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
1579 4 3.37444 0.13743 3.42635 2.78609 4 - -
|
|
1580 1.38629 1.38629 1.38629 1.38629
|
|
1581 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
1582 5 3.37444 0.13743 3.42635 2.78609 5 - -
|
|
1583 1.38629 1.38629 1.38629 1.38629
|
|
1584 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
1585 6 3.37444 0.13743 3.42635 2.78609 6 - -
|
|
1586 1.38629 1.38629 1.38629 1.38629
|
|
1587 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
1588 7 0.14880 3.32943 2.76878 3.22633 7 - -
|
|
1589 1.38629 1.38629 1.38629 1.38629
|
|
1590 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
1591 8 0.14880 3.32943 2.76878 3.22633 8 - -
|
|
1592 1.38629 1.38629 1.38629 1.38629
|
|
1593 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
1594 9 2.91173 3.53592 0.12299 3.43528 9 - -
|
|
1595 1.38629 1.38629 1.38629 1.38629
|
|
1596 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
1597 10 2.91173 3.53592 0.12299 3.43528 10 - -
|
|
1598 1.38629 1.38629 1.38629 1.38629
|
|
1599 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
1600 11 3.37444 0.13743 3.42635 2.78609 11 - -
|
|
1601 1.38629 1.38629 1.38629 1.38629
|
|
1602 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
1603 12 3.03758 2.56263 3.08768 0.18713 12 - -
|
|
1604 1.38629 1.38629 1.38629 1.38629
|
|
1605 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
1606 13 3.03758 2.56263 3.08768 0.18713 13 - -
|
|
1607 1.38629 1.38629 1.38629 1.38629
|
|
1608 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
1609 14 3.37444 0.13743 3.42635 2.78609 14 - -
|
|
1610 1.38629 1.38629 1.38629 1.38629
|
|
1611 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
1612 15 2.91173 3.53592 0.12299 3.43528 15 - -
|
|
1613 1.38629 1.38629 1.38629 1.38629
|
|
1614 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
1615 16 2.91173 3.53592 0.12299 3.43528 16 - -
|
|
1616 1.38629 1.38629 1.38629 1.38629
|
|
1617 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
1618 17 3.37444 0.13743 3.42635 2.78609 17 - -
|
|
1619 1.38629 1.38629 1.38629 1.38629
|
|
1620 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
1621 18 3.03758 2.56263 3.08768 0.18713 18 - -
|
|
1622 1.38629 1.38629 1.38629 1.38629
|
|
1623 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
1624 19 2.91173 3.53592 0.12299 3.43528 19 - -
|
|
1625 1.38629 1.38629 1.38629 1.38629
|
|
1626 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
1627 20 0.14880 3.32943 2.76878 3.22633 20 - -
|
|
1628 1.38629 1.38629 1.38629 1.38629
|
|
1629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
1630 21 2.91173 3.53592 0.12299 3.43528 21 - -
|
|
1631 1.38629 1.38629 1.38629 1.38629
|
|
1632 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
1633 22 2.91173 3.53592 0.12299 3.43528 22 - -
|
|
1634 1.38629 1.38629 1.38629 1.38629
|
|
1635 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
1636 23 2.91173 3.53592 0.12299 3.43528 23 - -
|
|
1637 1.38629 1.38629 1.38629 1.38629
|
|
1638 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
1639 24 3.37444 0.13743 3.42635 2.78609 24 - -
|
|
1640 1.38629 1.38629 1.38629 1.38629
|
|
1641 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
1642 25 0.14880 3.32943 2.76878 3.22633 25 - -
|
|
1643 1.38629 1.38629 1.38629 1.38629
|
|
1644 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
1645 26 3.03758 2.56263 3.08768 0.18713 26 - -
|
|
1646 1.38629 1.38629 1.38629 1.38629
|
|
1647 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
1648 27 2.91173 3.53592 0.12299 3.43528 27 - -
|
|
1649 1.38629 1.38629 1.38629 1.38629
|
|
1650 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
1651 28 3.03758 2.56263 3.08768 0.18713 28 - -
|
|
1652 1.38629 1.38629 1.38629 1.38629
|
|
1653 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
1654 29 3.03758 2.56263 3.08768 0.18713 29 - -
|
|
1655 1.38629 1.38629 1.38629 1.38629
|
|
1656 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
1657 30 3.03758 2.56263 3.08768 0.18713 30 - -
|
|
1658 1.38629 1.38629 1.38629 1.38629
|
|
1659 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
1660 31 2.91173 3.53592 0.12299 3.43528 31 - -
|
|
1661 1.38629 1.38629 1.38629 1.38629
|
|
1662 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
1663 32 3.37444 0.13743 3.42635 2.78609 32 - -
|
|
1664 1.38629 1.38629 1.38629 1.38629
|
|
1665 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
1666 33 3.37444 0.13743 3.42635 2.78609 33 - -
|
|
1667 1.38629 1.38629 1.38629 1.38629
|
|
1668 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
1669 34 3.03758 2.56263 3.08768 0.18713 34 - -
|
|
1670 1.38629 1.38629 1.38629 1.38629
|
|
1671 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
1672 35 3.37444 0.13743 3.42635 2.78609 35 - -
|
|
1673 1.38629 1.38629 1.38629 1.38629
|
|
1674 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
1675 36 0.14880 3.32943 2.76878 3.22633 36 - -
|
|
1676 1.38629 1.38629 1.38629 1.38629
|
|
1677 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
1678 37 2.91173 3.53592 0.12299 3.43528 37 - -
|
|
1679 1.38629 1.38629 1.38629 1.38629
|
|
1680 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
1681 38 3.37444 0.13743 3.42635 2.78609 38 - -
|
|
1682 1.38629 1.38629 1.38629 1.38629
|
|
1683 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
1684 39 2.91173 3.53592 0.12299 3.43528 39 - -
|
|
1685 1.38629 1.38629 1.38629 1.38629
|
|
1686 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
1687 40 3.03758 2.56263 3.08768 0.18713 40 - -
|
|
1688 1.38629 1.38629 1.38629 1.38629
|
|
1689 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
1690 41 3.37444 0.13743 3.42635 2.78609 41 - -
|
|
1691 1.38629 1.38629 1.38629 1.38629
|
|
1692 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
1693 42 2.91173 3.53592 0.12299 3.43528 42 - -
|
|
1694 1.38629 1.38629 1.38629 1.38629
|
|
1695 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
1696 43 2.91173 3.53592 0.12299 3.43528 43 - -
|
|
1697 1.38629 1.38629 1.38629 1.38629
|
|
1698 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
1699 44 2.91173 3.53592 0.12299 3.43528 44 - -
|
|
1700 1.38629 1.38629 1.38629 1.38629
|
|
1701 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
1702 45 2.75074 1.94228 2.81080 0.31118 45 - -
|
|
1703 1.38629 1.38629 1.38629 1.38629
|
|
1704 0.01917 3.96423 * 1.46634 0.26236 0.00000 *
|
|
1705 //
|
|
1706 HMMER3/b [3.0 | March 2010]
|
|
1707 NAME 3_End_Chlorophyta_58S_end_fourg_long
|
|
1708 LENG 45
|
|
1709 ALPH DNA
|
|
1710 RF no
|
|
1711 CS no
|
|
1712 MAP yes
|
|
1713 DATE Sat Jan 28 01:06:07 2012
|
|
1714 NSEQ 2
|
|
1715 EFFN 2.000000
|
|
1716 CKSUM 2243792262
|
|
1717 STATS LOCAL MSV -7.3533 0.72732
|
|
1718 STATS LOCAL VITERBI -8.2770 0.72732
|
|
1719 STATS LOCAL FORWARD -3.2502 0.72732
|
|
1720 HMM A C G T
|
|
1721 m->m m->i m->d i->m i->i d->m d->d
|
|
1722 COMPO 1.92263 1.24319 1.07887 1.49018
|
|
1723 1.38629 1.38629 1.38629 1.38629
|
|
1724 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
1725 1 2.53331 3.02441 0.20344 2.88069 1 - -
|
|
1726 1.38629 1.38629 1.38629 1.38629
|
|
1727 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1728 2 2.81865 0.23582 2.88868 2.35662 2 - -
|
|
1729 1.38629 1.38629 1.38629 1.38629
|
|
1730 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1731 3 2.53331 3.02441 0.20344 2.88069 3 - -
|
|
1732 1.38629 1.38629 1.38629 1.38629
|
|
1733 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1734 4 2.57915 2.25909 2.64442 0.28946 4 - -
|
|
1735 1.38629 1.38629 1.38629 1.38629
|
|
1736 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1737 5 2.81865 0.23582 2.88868 2.35662 5 - -
|
|
1738 1.38629 1.38629 1.38629 1.38629
|
|
1739 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1740 6 2.81865 0.23582 2.88868 2.35662 6 - -
|
|
1741 1.38629 1.38629 1.38629 1.38629
|
|
1742 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1743 7 2.53331 3.02441 0.20344 2.88069 7 - -
|
|
1744 1.38629 1.38629 1.38629 1.38629
|
|
1745 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1746 8 2.81865 0.23582 2.88868 2.35662 8 - -
|
|
1747 1.38629 1.38629 1.38629 1.38629
|
|
1748 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1749 9 2.53331 3.02441 0.20344 2.88069 9 - -
|
|
1750 1.38629 1.38629 1.38629 1.38629
|
|
1751 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1752 10 2.53331 3.02441 0.20344 2.88069 10 - -
|
|
1753 1.38629 1.38629 1.38629 1.38629
|
|
1754 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1755 11 2.81865 0.23582 2.88868 2.35662 11 - -
|
|
1756 1.38629 1.38629 1.38629 1.38629
|
|
1757 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1758 12 2.57915 2.25909 2.64442 0.28946 12 - -
|
|
1759 1.38629 1.38629 1.38629 1.38629
|
|
1760 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1761 13 2.57915 2.25909 2.64442 0.28946 13 - -
|
|
1762 1.38629 1.38629 1.38629 1.38629
|
|
1763 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1764 14 2.81865 0.23582 2.88868 2.35662 14 - -
|
|
1765 1.38629 1.38629 1.38629 1.38629
|
|
1766 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1767 15 2.53331 3.02441 0.20344 2.88069 15 - -
|
|
1768 1.38629 1.38629 1.38629 1.38629
|
|
1769 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1770 16 2.53331 3.02441 0.20344 2.88069 16 - -
|
|
1771 1.38629 1.38629 1.38629 1.38629
|
|
1772 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1773 17 2.81865 0.23582 2.88868 2.35662 17 - -
|
|
1774 1.38629 1.38629 1.38629 1.38629
|
|
1775 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1776 18 2.81865 0.23582 2.88868 2.35662 18 - -
|
|
1777 1.38629 1.38629 1.38629 1.38629
|
|
1778 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1779 19 0.23862 2.84929 2.43386 2.70756 19 - -
|
|
1780 1.38629 1.38629 1.38629 1.38629
|
|
1781 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1782 20 0.23862 2.84929 2.43386 2.70756 20 - -
|
|
1783 1.38629 1.38629 1.38629 1.38629
|
|
1784 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1785 21 2.53331 3.02441 0.20344 2.88069 21 - -
|
|
1786 1.38629 1.38629 1.38629 1.38629
|
|
1787 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1788 22 2.53331 3.02441 0.20344 2.88069 22 - -
|
|
1789 1.38629 1.38629 1.38629 1.38629
|
|
1790 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1791 23 2.53331 3.02441 0.20344 2.88069 23 - -
|
|
1792 1.38629 1.38629 1.38629 1.38629
|
|
1793 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1794 24 2.81865 0.23582 2.88868 2.35662 24 - -
|
|
1795 1.38629 1.38629 1.38629 1.38629
|
|
1796 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1797 25 0.23862 2.84929 2.43386 2.70756 25 - -
|
|
1798 1.38629 1.38629 1.38629 1.38629
|
|
1799 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1800 26 2.57915 2.25909 2.64442 0.28946 26 - -
|
|
1801 1.38629 1.38629 1.38629 1.38629
|
|
1802 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1803 27 2.53331 3.02441 0.20344 2.88069 27 - -
|
|
1804 1.38629 1.38629 1.38629 1.38629
|
|
1805 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1806 28 2.57915 2.25909 2.64442 0.28946 28 - -
|
|
1807 1.38629 1.38629 1.38629 1.38629
|
|
1808 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1809 29 2.57915 2.25909 2.64442 0.28946 29 - -
|
|
1810 1.38629 1.38629 1.38629 1.38629
|
|
1811 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1812 30 2.57915 2.25909 2.64442 0.28946 30 - -
|
|
1813 1.38629 1.38629 1.38629 1.38629
|
|
1814 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1815 31 2.53331 3.02441 0.20344 2.88069 31 - -
|
|
1816 1.38629 1.38629 1.38629 1.38629
|
|
1817 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1818 32 2.81865 0.23582 2.88868 2.35662 32 - -
|
|
1819 1.38629 1.38629 1.38629 1.38629
|
|
1820 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1821 33 2.81865 0.23582 2.88868 2.35662 33 - -
|
|
1822 1.38629 1.38629 1.38629 1.38629
|
|
1823 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1824 34 2.57915 2.25909 2.64442 0.28946 34 - -
|
|
1825 1.38629 1.38629 1.38629 1.38629
|
|
1826 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1827 35 2.81865 0.23582 2.88868 2.35662 35 - -
|
|
1828 1.38629 1.38629 1.38629 1.38629
|
|
1829 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1830 36 0.23862 2.84929 2.43386 2.70756 36 - -
|
|
1831 1.38629 1.38629 1.38629 1.38629
|
|
1832 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1833 37 2.53331 3.02441 0.20344 2.88069 37 - -
|
|
1834 1.38629 1.38629 1.38629 1.38629
|
|
1835 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1836 38 2.81865 0.23582 2.88868 2.35662 38 - -
|
|
1837 1.38629 1.38629 1.38629 1.38629
|
|
1838 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1839 39 2.53331 3.02441 0.20344 2.88069 39 - -
|
|
1840 1.38629 1.38629 1.38629 1.38629
|
|
1841 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1842 40 2.57915 2.25909 2.64442 0.28946 40 - -
|
|
1843 1.38629 1.38629 1.38629 1.38629
|
|
1844 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1845 41 2.81865 0.23582 2.88868 2.35662 41 - -
|
|
1846 1.38629 1.38629 1.38629 1.38629
|
|
1847 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1848 42 2.53331 3.02441 0.20344 2.88069 42 - -
|
|
1849 1.38629 1.38629 1.38629 1.38629
|
|
1850 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1851 43 2.53331 3.02441 0.20344 2.88069 43 - -
|
|
1852 1.38629 1.38629 1.38629 1.38629
|
|
1853 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1854 44 2.53331 3.02441 0.20344 2.88069 44 - -
|
|
1855 1.38629 1.38629 1.38629 1.38629
|
|
1856 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1857 45 2.57915 2.25909 2.64442 0.28946 45 - -
|
|
1858 1.38629 1.38629 1.38629 1.38629
|
|
1859 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
1860 //
|
|
1861 HMMER3/b [3.0 | March 2010]
|
|
1862 NAME 3_End_Chlorophyta_58S_end_fourteen_long
|
|
1863 LENG 45
|
|
1864 ALPH DNA
|
|
1865 RF no
|
|
1866 CS no
|
|
1867 MAP yes
|
|
1868 DATE Sat Jan 28 01:09:05 2012
|
|
1869 NSEQ 2
|
|
1870 EFFN 2.000000
|
|
1871 CKSUM 3072563933
|
|
1872 STATS LOCAL MSV -7.4500 0.72782
|
|
1873 STATS LOCAL VITERBI -8.2633 0.72782
|
|
1874 STATS LOCAL FORWARD -3.4545 0.72782
|
|
1875 HMM A C G T
|
|
1876 m->m m->i m->d i->m i->i d->m d->d
|
|
1877 COMPO 1.92135 1.28482 1.17173 1.32028
|
|
1878 1.38629 1.38629 1.38629 1.38629
|
|
1879 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
1880 1 2.57915 2.25909 2.64442 0.28946 1 - -
|
|
1881 1.38629 1.38629 1.38629 1.38629
|
|
1882 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1883 2 2.57915 2.25909 2.64442 0.28946 2 - -
|
|
1884 1.38629 1.38629 1.38629 1.38629
|
|
1885 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1886 3 2.53331 3.02441 0.20344 2.88069 3 - -
|
|
1887 1.38629 1.38629 1.38629 1.38629
|
|
1888 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1889 4 2.81865 0.23582 2.88868 2.35662 4 - -
|
|
1890 1.38629 1.38629 1.38629 1.38629
|
|
1891 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1892 5 2.53331 3.02441 0.20344 2.88069 5 - -
|
|
1893 1.38629 1.38629 1.38629 1.38629
|
|
1894 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1895 6 2.81865 0.23582 2.88868 2.35662 6 - -
|
|
1896 1.38629 1.38629 1.38629 1.38629
|
|
1897 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1898 7 2.81865 0.23582 2.88868 2.35662 7 - -
|
|
1899 1.38629 1.38629 1.38629 1.38629
|
|
1900 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1901 8 2.81865 0.23582 2.88868 2.35662 8 - -
|
|
1902 1.38629 1.38629 1.38629 1.38629
|
|
1903 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1904 9 2.53331 3.02441 0.20344 2.88069 9 - -
|
|
1905 1.38629 1.38629 1.38629 1.38629
|
|
1906 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1907 10 2.53331 3.02441 0.20344 2.88069 10 - -
|
|
1908 1.38629 1.38629 1.38629 1.38629
|
|
1909 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1910 11 2.53331 3.02441 0.20344 2.88069 11 - -
|
|
1911 1.38629 1.38629 1.38629 1.38629
|
|
1912 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1913 12 2.57915 2.25909 2.64442 0.28946 12 - -
|
|
1914 1.38629 1.38629 1.38629 1.38629
|
|
1915 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1916 13 2.57915 2.25909 2.64442 0.28946 13 - -
|
|
1917 1.38629 1.38629 1.38629 1.38629
|
|
1918 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1919 14 2.57915 2.25909 2.64442 0.28946 14 - -
|
|
1920 1.38629 1.38629 1.38629 1.38629
|
|
1921 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1922 15 2.53331 3.02441 0.20344 2.88069 15 - -
|
|
1923 1.38629 1.38629 1.38629 1.38629
|
|
1924 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1925 16 0.23862 2.84929 2.43386 2.70756 16 - -
|
|
1926 1.38629 1.38629 1.38629 1.38629
|
|
1927 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1928 17 2.53331 3.02441 0.20344 2.88069 17 - -
|
|
1929 1.38629 1.38629 1.38629 1.38629
|
|
1930 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1931 18 2.81865 0.23582 2.88868 2.35662 18 - -
|
|
1932 1.38629 1.38629 1.38629 1.38629
|
|
1933 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1934 19 2.81865 0.23582 2.88868 2.35662 19 - -
|
|
1935 1.38629 1.38629 1.38629 1.38629
|
|
1936 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1937 20 2.57915 2.25909 2.64442 0.28946 20 - -
|
|
1938 1.38629 1.38629 1.38629 1.38629
|
|
1939 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1940 21 2.53331 3.02441 0.20344 2.88069 21 - -
|
|
1941 1.38629 1.38629 1.38629 1.38629
|
|
1942 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1943 22 2.53331 3.02441 0.20344 2.88069 22 - -
|
|
1944 1.38629 1.38629 1.38629 1.38629
|
|
1945 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1946 23 2.53331 3.02441 0.20344 2.88069 23 - -
|
|
1947 1.38629 1.38629 1.38629 1.38629
|
|
1948 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1949 24 2.81865 0.23582 2.88868 2.35662 24 - -
|
|
1950 1.38629 1.38629 1.38629 1.38629
|
|
1951 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1952 25 0.23862 2.84929 2.43386 2.70756 25 - -
|
|
1953 1.38629 1.38629 1.38629 1.38629
|
|
1954 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1955 26 2.57915 2.25909 2.64442 0.28946 26 - -
|
|
1956 1.38629 1.38629 1.38629 1.38629
|
|
1957 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1958 27 2.53331 3.02441 0.20344 2.88069 27 - -
|
|
1959 1.38629 1.38629 1.38629 1.38629
|
|
1960 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1961 28 2.57915 2.25909 2.64442 0.28946 28 - -
|
|
1962 1.38629 1.38629 1.38629 1.38629
|
|
1963 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1964 29 2.81865 0.23582 2.88868 2.35662 29 - -
|
|
1965 1.38629 1.38629 1.38629 1.38629
|
|
1966 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1967 30 2.57915 2.25909 2.64442 0.28946 30 - -
|
|
1968 1.38629 1.38629 1.38629 1.38629
|
|
1969 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1970 31 2.53331 3.02441 0.20344 2.88069 31 - -
|
|
1971 1.38629 1.38629 1.38629 1.38629
|
|
1972 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1973 32 2.81865 0.23582 2.88868 2.35662 32 - -
|
|
1974 1.38629 1.38629 1.38629 1.38629
|
|
1975 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1976 33 2.81865 0.23582 2.88868 2.35662 33 - -
|
|
1977 1.38629 1.38629 1.38629 1.38629
|
|
1978 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1979 34 2.57915 2.25909 2.64442 0.28946 34 - -
|
|
1980 1.38629 1.38629 1.38629 1.38629
|
|
1981 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1982 35 2.81865 0.23582 2.88868 2.35662 35 - -
|
|
1983 1.38629 1.38629 1.38629 1.38629
|
|
1984 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1985 36 0.23862 2.84929 2.43386 2.70756 36 - -
|
|
1986 1.38629 1.38629 1.38629 1.38629
|
|
1987 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1988 37 2.53331 3.02441 0.20344 2.88069 37 - -
|
|
1989 1.38629 1.38629 1.38629 1.38629
|
|
1990 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1991 38 2.81865 0.23582 2.88868 2.35662 38 - -
|
|
1992 1.38629 1.38629 1.38629 1.38629
|
|
1993 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1994 39 2.53331 3.02441 0.20344 2.88069 39 - -
|
|
1995 1.38629 1.38629 1.38629 1.38629
|
|
1996 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
1997 40 2.57915 2.25909 2.64442 0.28946 40 - -
|
|
1998 1.38629 1.38629 1.38629 1.38629
|
|
1999 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2000 41 2.81865 0.23582 2.88868 2.35662 41 - -
|
|
2001 1.38629 1.38629 1.38629 1.38629
|
|
2002 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2003 42 2.53331 3.02441 0.20344 2.88069 42 - -
|
|
2004 1.38629 1.38629 1.38629 1.38629
|
|
2005 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2006 43 0.23862 2.84929 2.43386 2.70756 43 - -
|
|
2007 1.38629 1.38629 1.38629 1.38629
|
|
2008 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2009 44 2.57915 2.25909 2.64442 0.28946 44 - -
|
|
2010 1.38629 1.38629 1.38629 1.38629
|
|
2011 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2012 45 2.57915 2.25909 2.64442 0.28946 45 - -
|
|
2013 1.38629 1.38629 1.38629 1.38629
|
|
2014 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
2015 //
|
|
2016 HMMER3/b [3.0 | March 2010]
|
|
2017 NAME 3_End_Chlorophyta_58S_end_nine_long
|
|
2018 LENG 45
|
|
2019 ALPH DNA
|
|
2020 RF no
|
|
2021 CS no
|
|
2022 MAP yes
|
|
2023 DATE Sat Jan 28 01:07:08 2012
|
|
2024 NSEQ 8
|
|
2025 EFFN 3.128906
|
|
2026 CKSUM 2240641702
|
|
2027 STATS LOCAL MSV -8.0911 0.71933
|
|
2028 STATS LOCAL VITERBI -7.7425 0.71933
|
|
2029 STATS LOCAL FORWARD -4.1987 0.71933
|
|
2030 HMM A C G T
|
|
2031 m->m m->i m->d i->m i->i d->m d->d
|
|
2032 COMPO 1.82201 1.15564 1.14738 1.58000
|
|
2033 1.38629 1.38629 1.38629 1.38629
|
|
2034 0.03825 3.97573 3.97573 1.46634 0.26236 0.00000 *
|
|
2035 1 2.90228 3.52232 0.12458 3.42031 1 - -
|
|
2036 1.38629 1.38629 1.38629 1.38629
|
|
2037 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
2038 2 3.35912 0.13939 3.41165 2.77481 2 - -
|
|
2039 1.38629 1.38629 1.38629 1.38629
|
|
2040 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
2041 3 0.15066 3.31617 2.76009 3.21184 3 - -
|
|
2042 1.38629 1.38629 1.38629 1.38629
|
|
2043 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
2044 4 3.35912 0.13939 3.41165 2.77481 4 - -
|
|
2045 1.38629 1.38629 1.38629 1.38629
|
|
2046 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
2047 5 3.02437 2.55419 3.07496 0.18939 5 - -
|
|
2048 1.38629 1.38629 1.38629 1.38629
|
|
2049 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
2050 6 3.35912 0.13939 3.41165 2.77481 6 - -
|
|
2051 1.38629 1.38629 1.38629 1.38629
|
|
2052 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
2053 7 2.90228 3.52232 0.12458 3.42031 7 - -
|
|
2054 1.38629 1.38629 1.38629 1.38629
|
|
2055 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
2056 8 0.15066 3.31617 2.76009 3.21184 8 - -
|
|
2057 1.38629 1.38629 1.38629 1.38629
|
|
2058 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
2059 9 2.90228 3.52232 0.12458 3.42031 9 - -
|
|
2060 1.38629 1.38629 1.38629 1.38629
|
|
2061 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
2062 10 2.90228 3.52232 0.12458 3.42031 10 - -
|
|
2063 1.38629 1.38629 1.38629 1.38629
|
|
2064 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
2065 11 3.35912 0.13939 3.41165 2.77481 11 - -
|
|
2066 1.38629 1.38629 1.38629 1.38629
|
|
2067 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
2068 12 3.02437 2.55419 3.07496 0.18939 12 - -
|
|
2069 1.38629 1.38629 1.38629 1.38629
|
|
2070 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
2071 13 3.35912 0.13939 3.41165 2.77481 13 - -
|
|
2072 1.38629 1.38629 1.38629 1.38629
|
|
2073 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
2074 14 3.35912 0.13939 3.41165 2.77481 14 - -
|
|
2075 1.38629 1.38629 1.38629 1.38629
|
|
2076 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
2077 15 2.90228 3.52232 0.12458 3.42031 15 - -
|
|
2078 1.38629 1.38629 1.38629 1.38629
|
|
2079 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
2080 16 2.90228 3.52232 0.12458 3.42031 16 - -
|
|
2081 1.38629 1.38629 1.38629 1.38629
|
|
2082 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
2083 17 3.35912 0.13939 3.41165 2.77481 17 - -
|
|
2084 1.38629 1.38629 1.38629 1.38629
|
|
2085 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
2086 18 3.35912 0.13939 3.41165 2.77481 18 - -
|
|
2087 1.38629 1.38629 1.38629 1.38629
|
|
2088 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
2089 19 2.90228 3.52232 0.12458 3.42031 19 - -
|
|
2090 1.38629 1.38629 1.38629 1.38629
|
|
2091 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
2092 20 0.15066 3.31617 2.76009 3.21184 20 - -
|
|
2093 1.38629 1.38629 1.38629 1.38629
|
|
2094 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
2095 21 2.90228 3.52232 0.12458 3.42031 21 - -
|
|
2096 1.38629 1.38629 1.38629 1.38629
|
|
2097 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
2098 22 0.15066 3.31617 2.76009 3.21184 22 - -
|
|
2099 1.38629 1.38629 1.38629 1.38629
|
|
2100 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
2101 23 2.90228 3.52232 0.12458 3.42031 23 - -
|
|
2102 1.38629 1.38629 1.38629 1.38629
|
|
2103 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
2104 24 3.02437 2.55419 3.07496 0.18939 24 - -
|
|
2105 1.38629 1.38629 1.38629 1.38629
|
|
2106 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
2107 25 0.15066 3.31617 2.76009 3.21184 25 - -
|
|
2108 1.38629 1.38629 1.38629 1.38629
|
|
2109 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
2110 26 3.02437 2.55419 3.07496 0.18939 26 - -
|
|
2111 1.38629 1.38629 1.38629 1.38629
|
|
2112 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
2113 27 2.90228 3.52232 0.12458 3.42031 27 - -
|
|
2114 1.38629 1.38629 1.38629 1.38629
|
|
2115 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
2116 28 3.02437 2.55419 3.07496 0.18939 28 - -
|
|
2117 1.38629 1.38629 1.38629 1.38629
|
|
2118 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
2119 29 3.35912 0.13939 3.41165 2.77481 29 - -
|
|
2120 1.38629 1.38629 1.38629 1.38629
|
|
2121 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
2122 30 3.02437 2.55419 3.07496 0.18939 30 - -
|
|
2123 1.38629 1.38629 1.38629 1.38629
|
|
2124 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
2125 31 2.90228 3.52232 0.12458 3.42031 31 - -
|
|
2126 1.38629 1.38629 1.38629 1.38629
|
|
2127 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
2128 32 3.35912 0.13939 3.41165 2.77481 32 - -
|
|
2129 1.38629 1.38629 1.38629 1.38629
|
|
2130 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
2131 33 3.35912 0.13939 3.41165 2.77481 33 - -
|
|
2132 1.38629 1.38629 1.38629 1.38629
|
|
2133 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
2134 34 3.02437 2.55419 3.07496 0.18939 34 - -
|
|
2135 1.38629 1.38629 1.38629 1.38629
|
|
2136 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
2137 35 3.35912 0.13939 3.41165 2.77481 35 - -
|
|
2138 1.38629 1.38629 1.38629 1.38629
|
|
2139 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
2140 36 0.15066 3.31617 2.76009 3.21184 36 - -
|
|
2141 1.38629 1.38629 1.38629 1.38629
|
|
2142 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
2143 37 2.90228 3.52232 0.12458 3.42031 37 - -
|
|
2144 1.38629 1.38629 1.38629 1.38629
|
|
2145 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
2146 38 3.35912 0.13939 3.41165 2.77481 38 - -
|
|
2147 1.38629 1.38629 1.38629 1.38629
|
|
2148 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
2149 39 2.90228 3.52232 0.12458 3.42031 39 - -
|
|
2150 1.38629 1.38629 1.38629 1.38629
|
|
2151 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
2152 40 3.02437 2.55419 3.07496 0.18939 40 - -
|
|
2153 1.38629 1.38629 1.38629 1.38629
|
|
2154 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
2155 41 3.35912 0.13939 3.41165 2.77481 41 - -
|
|
2156 1.38629 1.38629 1.38629 1.38629
|
|
2157 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
2158 42 2.90228 3.52232 0.12458 3.42031 42 - -
|
|
2159 1.38629 1.38629 1.38629 1.38629
|
|
2160 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
2161 43 2.90228 3.52232 0.12458 3.42031 43 - -
|
|
2162 1.38629 1.38629 1.38629 1.38629
|
|
2163 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
2164 44 3.35912 0.13939 3.41165 2.77481 44 - -
|
|
2165 1.38629 1.38629 1.38629 1.38629
|
|
2166 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
2167 45 3.02437 2.55419 3.07496 0.18939 45 - -
|
|
2168 1.38629 1.38629 1.38629 1.38629
|
|
2169 0.01931 3.95679 * 1.46634 0.26236 0.00000 *
|
|
2170 //
|
|
2171 HMMER3/b [3.0 | March 2010]
|
|
2172 NAME 3_End_Chlorophyta_58S_end_onea_long
|
|
2173 LENG 45
|
|
2174 ALPH DNA
|
|
2175 RF no
|
|
2176 CS no
|
|
2177 MAP yes
|
|
2178 DATE Sat Jan 28 01:03:35 2012
|
|
2179 NSEQ 2
|
|
2180 EFFN 2.000000
|
|
2181 CKSUM 2817009518
|
|
2182 STATS LOCAL MSV -7.3765 0.72757
|
|
2183 STATS LOCAL VITERBI -8.2230 0.72757
|
|
2184 STATS LOCAL FORWARD -3.3891 0.72757
|
|
2185 HMM A C G T
|
|
2186 m->m m->i m->d i->m i->i d->m d->d
|
|
2187 COMPO 1.66659 1.24202 1.21600 1.48769
|
|
2188 1.38629 1.38629 1.38629 1.38629
|
|
2189 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
2190 1 2.53331 3.02441 0.20344 2.88069 1 - -
|
|
2191 1.38629 1.38629 1.38629 1.38629
|
|
2192 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2193 2 2.81865 0.23582 2.88868 2.35662 2 - -
|
|
2194 1.38629 1.38629 1.38629 1.38629
|
|
2195 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2196 3 2.53331 3.02441 0.20344 2.88069 3 - -
|
|
2197 1.38629 1.38629 1.38629 1.38629
|
|
2198 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2199 4 2.53331 3.02441 0.20344 2.88069 4 - -
|
|
2200 1.38629 1.38629 1.38629 1.38629
|
|
2201 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2202 5 2.57915 2.25909 2.64442 0.28946 5 - -
|
|
2203 1.38629 1.38629 1.38629 1.38629
|
|
2204 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2205 6 2.53331 3.02441 0.20344 2.88069 6 - -
|
|
2206 1.38629 1.38629 1.38629 1.38629
|
|
2207 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2208 7 0.23862 2.84929 2.43386 2.70756 7 - -
|
|
2209 1.38629 1.38629 1.38629 1.38629
|
|
2210 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2211 8 0.23862 2.84929 2.43386 2.70756 8 - -
|
|
2212 1.38629 1.38629 1.38629 1.38629
|
|
2213 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2214 9 2.53331 3.02441 0.20344 2.88069 9 - -
|
|
2215 1.38629 1.38629 1.38629 1.38629
|
|
2216 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2217 10 2.53331 3.02441 0.20344 2.88069 10 - -
|
|
2218 1.38629 1.38629 1.38629 1.38629
|
|
2219 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2220 11 2.81865 0.23582 2.88868 2.35662 11 - -
|
|
2221 1.38629 1.38629 1.38629 1.38629
|
|
2222 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2223 12 2.81865 0.23582 2.88868 2.35662 12 - -
|
|
2224 1.38629 1.38629 1.38629 1.38629
|
|
2225 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2226 13 2.57915 2.25909 2.64442 0.28946 13 - -
|
|
2227 1.38629 1.38629 1.38629 1.38629
|
|
2228 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2229 14 2.81865 0.23582 2.88868 2.35662 14 - -
|
|
2230 1.38629 1.38629 1.38629 1.38629
|
|
2231 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2232 15 2.53331 3.02441 0.20344 2.88069 15 - -
|
|
2233 1.38629 1.38629 1.38629 1.38629
|
|
2234 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2235 16 2.53331 3.02441 0.20344 2.88069 16 - -
|
|
2236 1.38629 1.38629 1.38629 1.38629
|
|
2237 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2238 17 2.81865 0.23582 2.88868 2.35662 17 - -
|
|
2239 1.38629 1.38629 1.38629 1.38629
|
|
2240 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2241 18 2.57915 2.25909 2.64442 0.28946 18 - -
|
|
2242 1.38629 1.38629 1.38629 1.38629
|
|
2243 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2244 19 0.23862 2.84929 2.43386 2.70756 19 - -
|
|
2245 1.38629 1.38629 1.38629 1.38629
|
|
2246 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2247 20 2.81865 0.23582 2.88868 2.35662 20 - -
|
|
2248 1.38629 1.38629 1.38629 1.38629
|
|
2249 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2250 21 2.81865 0.23582 2.88868 2.35662 21 - -
|
|
2251 1.38629 1.38629 1.38629 1.38629
|
|
2252 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2253 22 0.23862 2.84929 2.43386 2.70756 22 - -
|
|
2254 1.38629 1.38629 1.38629 1.38629
|
|
2255 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2256 23 2.81865 0.23582 2.88868 2.35662 23 - -
|
|
2257 1.38629 1.38629 1.38629 1.38629
|
|
2258 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2259 24 2.81865 0.23582 2.88868 2.35662 24 - -
|
|
2260 1.38629 1.38629 1.38629 1.38629
|
|
2261 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2262 25 0.23862 2.84929 2.43386 2.70756 25 - -
|
|
2263 1.38629 1.38629 1.38629 1.38629
|
|
2264 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2265 26 2.57915 2.25909 2.64442 0.28946 26 - -
|
|
2266 1.38629 1.38629 1.38629 1.38629
|
|
2267 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2268 27 2.81865 0.23582 2.88868 2.35662 27 - -
|
|
2269 1.38629 1.38629 1.38629 1.38629
|
|
2270 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2271 28 2.57915 2.25909 2.64442 0.28946 28 - -
|
|
2272 1.38629 1.38629 1.38629 1.38629
|
|
2273 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2274 29 2.81865 0.23582 2.88868 2.35662 29 - -
|
|
2275 1.38629 1.38629 1.38629 1.38629
|
|
2276 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2277 30 2.57915 2.25909 2.64442 0.28946 30 - -
|
|
2278 1.38629 1.38629 1.38629 1.38629
|
|
2279 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2280 31 2.53331 3.02441 0.20344 2.88069 31 - -
|
|
2281 1.38629 1.38629 1.38629 1.38629
|
|
2282 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2283 32 2.53331 3.02441 0.20344 2.88069 32 - -
|
|
2284 1.38629 1.38629 1.38629 1.38629
|
|
2285 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2286 33 2.57915 2.25909 2.64442 0.28946 33 - -
|
|
2287 1.38629 1.38629 1.38629 1.38629
|
|
2288 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2289 34 2.57915 2.25909 2.64442 0.28946 34 - -
|
|
2290 1.38629 1.38629 1.38629 1.38629
|
|
2291 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2292 35 2.81865 0.23582 2.88868 2.35662 35 - -
|
|
2293 1.38629 1.38629 1.38629 1.38629
|
|
2294 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2295 36 0.23862 2.84929 2.43386 2.70756 36 - -
|
|
2296 1.38629 1.38629 1.38629 1.38629
|
|
2297 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2298 37 2.53331 3.02441 0.20344 2.88069 37 - -
|
|
2299 1.38629 1.38629 1.38629 1.38629
|
|
2300 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2301 38 2.81865 0.23582 2.88868 2.35662 38 - -
|
|
2302 1.38629 1.38629 1.38629 1.38629
|
|
2303 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2304 39 2.53331 3.02441 0.20344 2.88069 39 - -
|
|
2305 1.38629 1.38629 1.38629 1.38629
|
|
2306 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2307 40 2.57915 2.25909 2.64442 0.28946 40 - -
|
|
2308 1.38629 1.38629 1.38629 1.38629
|
|
2309 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2310 41 2.81865 0.23582 2.88868 2.35662 41 - -
|
|
2311 1.38629 1.38629 1.38629 1.38629
|
|
2312 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2313 42 2.53331 3.02441 0.20344 2.88069 42 - -
|
|
2314 1.38629 1.38629 1.38629 1.38629
|
|
2315 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2316 43 0.23862 2.84929 2.43386 2.70756 43 - -
|
|
2317 1.38629 1.38629 1.38629 1.38629
|
|
2318 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2319 44 2.57915 2.25909 2.64442 0.28946 44 - -
|
|
2320 1.38629 1.38629 1.38629 1.38629
|
|
2321 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2322 45 2.53331 3.02441 0.20344 2.88069 45 - -
|
|
2323 1.38629 1.38629 1.38629 1.38629
|
|
2324 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
2325 //
|
|
2326 HMMER3/b [3.0 | March 2010]
|
|
2327 NAME 3_End_Chlorophyta_58S_end_onec_long
|
|
2328 LENG 45
|
|
2329 ALPH DNA
|
|
2330 RF no
|
|
2331 CS no
|
|
2332 MAP yes
|
|
2333 DATE Sat Jan 28 01:03:55 2012
|
|
2334 NSEQ 3
|
|
2335 EFFN 3.000000
|
|
2336 CKSUM 1434293828
|
|
2337 STATS LOCAL MSV -8.0810 0.72041
|
|
2338 STATS LOCAL VITERBI -7.9114 0.72041
|
|
2339 STATS LOCAL FORWARD -4.0225 0.72041
|
|
2340 HMM A C G T
|
|
2341 m->m m->i m->d i->m i->i d->m d->d
|
|
2342 COMPO 1.62529 1.31451 1.19507 1.46163
|
|
2343 1.38629 1.38629 1.38629 1.38629
|
|
2344 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
|
|
2345 1 2.86982 3.47591 0.13017 3.36931 1 - -
|
|
2346 1.38629 1.38629 1.38629 1.38629
|
|
2347 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
2348 2 3.30705 0.14631 3.36166 2.73626 2 - -
|
|
2349 1.38629 1.38629 1.38629 1.38629
|
|
2350 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
2351 3 2.86982 3.47591 0.13017 3.36931 3 - -
|
|
2352 1.38629 1.38629 1.38629 1.38629
|
|
2353 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
2354 4 2.86982 3.47591 0.13017 3.36931 4 - -
|
|
2355 1.38629 1.38629 1.38629 1.38629
|
|
2356 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
2357 5 2.97980 2.52563 3.03204 0.19727 5 - -
|
|
2358 1.38629 1.38629 1.38629 1.38629
|
|
2359 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
2360 6 2.86982 3.47591 0.13017 3.36931 6 - -
|
|
2361 1.38629 1.38629 1.38629 1.38629
|
|
2362 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
2363 7 0.15719 3.27118 2.73043 3.16274 7 - -
|
|
2364 1.38629 1.38629 1.38629 1.38629
|
|
2365 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
2366 8 0.15719 3.27118 2.73043 3.16274 8 - -
|
|
2367 1.38629 1.38629 1.38629 1.38629
|
|
2368 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
2369 9 2.86982 3.47591 0.13017 3.36931 9 - -
|
|
2370 1.38629 1.38629 1.38629 1.38629
|
|
2371 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
2372 10 2.86982 3.47591 0.13017 3.36931 10 - -
|
|
2373 1.38629 1.38629 1.38629 1.38629
|
|
2374 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
2375 11 3.30705 0.14631 3.36166 2.73626 11 - -
|
|
2376 1.38629 1.38629 1.38629 1.38629
|
|
2377 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
2378 12 2.97980 2.52563 3.03204 0.19727 12 - -
|
|
2379 1.38629 1.38629 1.38629 1.38629
|
|
2380 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
2381 13 2.97980 2.52563 3.03204 0.19727 13 - -
|
|
2382 1.38629 1.38629 1.38629 1.38629
|
|
2383 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
2384 14 3.30705 0.14631 3.36166 2.73626 14 - -
|
|
2385 1.38629 1.38629 1.38629 1.38629
|
|
2386 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
2387 15 2.86982 3.47591 0.13017 3.36931 15 - -
|
|
2388 1.38629 1.38629 1.38629 1.38629
|
|
2389 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
2390 16 2.86982 3.47591 0.13017 3.36931 16 - -
|
|
2391 1.38629 1.38629 1.38629 1.38629
|
|
2392 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
2393 17 3.30705 0.14631 3.36166 2.73626 17 - -
|
|
2394 1.38629 1.38629 1.38629 1.38629
|
|
2395 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
2396 18 2.43088 1.34923 2.50068 0.56112 18 - -
|
|
2397 1.38629 1.38629 1.38629 1.38629
|
|
2398 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
2399 19 0.15719 3.27118 2.73043 3.16274 19 - -
|
|
2400 1.38629 1.38629 1.38629 1.38629
|
|
2401 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
2402 20 0.15719 3.27118 2.73043 3.16274 20 - -
|
|
2403 1.38629 1.38629 1.38629 1.38629
|
|
2404 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
2405 21 3.30705 0.14631 3.36166 2.73626 21 - -
|
|
2406 1.38629 1.38629 1.38629 1.38629
|
|
2407 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
2408 22 0.15719 3.27118 2.73043 3.16274 22 - -
|
|
2409 1.38629 1.38629 1.38629 1.38629
|
|
2410 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
2411 23 3.30705 0.14631 3.36166 2.73626 23 - -
|
|
2412 1.38629 1.38629 1.38629 1.38629
|
|
2413 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
2414 24 3.30705 0.14631 3.36166 2.73626 24 - -
|
|
2415 1.38629 1.38629 1.38629 1.38629
|
|
2416 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
2417 25 0.15719 3.27118 2.73043 3.16274 25 - -
|
|
2418 1.38629 1.38629 1.38629 1.38629
|
|
2419 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
2420 26 2.97980 2.52563 3.03204 0.19727 26 - -
|
|
2421 1.38629 1.38629 1.38629 1.38629
|
|
2422 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
2423 27 3.30705 0.14631 3.36166 2.73626 27 - -
|
|
2424 1.38629 1.38629 1.38629 1.38629
|
|
2425 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
2426 28 2.97980 2.52563 3.03204 0.19727 28 - -
|
|
2427 1.38629 1.38629 1.38629 1.38629
|
|
2428 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
2429 29 3.30705 0.14631 3.36166 2.73626 29 - -
|
|
2430 1.38629 1.38629 1.38629 1.38629
|
|
2431 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
2432 30 2.97980 2.52563 3.03204 0.19727 30 - -
|
|
2433 1.38629 1.38629 1.38629 1.38629
|
|
2434 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
2435 31 2.86982 3.47591 0.13017 3.36931 31 - -
|
|
2436 1.38629 1.38629 1.38629 1.38629
|
|
2437 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
2438 32 2.86982 3.47591 0.13017 3.36931 32 - -
|
|
2439 1.38629 1.38629 1.38629 1.38629
|
|
2440 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
2441 33 2.97980 2.52563 3.03204 0.19727 33 - -
|
|
2442 1.38629 1.38629 1.38629 1.38629
|
|
2443 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
2444 34 2.97980 2.52563 3.03204 0.19727 34 - -
|
|
2445 1.38629 1.38629 1.38629 1.38629
|
|
2446 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
2447 35 3.30705 0.14631 3.36166 2.73626 35 - -
|
|
2448 1.38629 1.38629 1.38629 1.38629
|
|
2449 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
2450 36 0.15719 3.27118 2.73043 3.16274 36 - -
|
|
2451 1.38629 1.38629 1.38629 1.38629
|
|
2452 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
2453 37 2.86982 3.47591 0.13017 3.36931 37 - -
|
|
2454 1.38629 1.38629 1.38629 1.38629
|
|
2455 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
2456 38 3.30705 0.14631 3.36166 2.73626 38 - -
|
|
2457 1.38629 1.38629 1.38629 1.38629
|
|
2458 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
2459 39 2.86982 3.47591 0.13017 3.36931 39 - -
|
|
2460 1.38629 1.38629 1.38629 1.38629
|
|
2461 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
2462 40 2.97980 2.52563 3.03204 0.19727 40 - -
|
|
2463 1.38629 1.38629 1.38629 1.38629
|
|
2464 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
2465 41 3.30705 0.14631 3.36166 2.73626 41 - -
|
|
2466 1.38629 1.38629 1.38629 1.38629
|
|
2467 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
2468 42 2.86982 3.47591 0.13017 3.36931 42 - -
|
|
2469 1.38629 1.38629 1.38629 1.38629
|
|
2470 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
2471 43 0.15719 3.27118 2.73043 3.16274 43 - -
|
|
2472 1.38629 1.38629 1.38629 1.38629
|
|
2473 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
2474 44 2.97980 2.52563 3.03204 0.19727 44 - -
|
|
2475 1.38629 1.38629 1.38629 1.38629
|
|
2476 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
2477 45 2.86982 3.47591 0.13017 3.36931 45 - -
|
|
2478 1.38629 1.38629 1.38629 1.38629
|
|
2479 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
|
|
2480 //
|
|
2481 HMMER3/b [3.0 | March 2010]
|
|
2482 NAME 3_End_Chlorophyta_58S_end_oned_long
|
|
2483 LENG 45
|
|
2484 ALPH DNA
|
|
2485 RF no
|
|
2486 CS no
|
|
2487 MAP yes
|
|
2488 DATE Sat Jan 28 01:04:07 2012
|
|
2489 NSEQ 2
|
|
2490 EFFN 2.000000
|
|
2491 CKSUM 468697630
|
|
2492 STATS LOCAL MSV -7.3499 0.72735
|
|
2493 STATS LOCAL VITERBI -8.3054 0.72735
|
|
2494 STATS LOCAL FORWARD -3.4738 0.72735
|
|
2495 HMM A C G T
|
|
2496 m->m m->i m->d i->m i->i d->m d->d
|
|
2497 COMPO 1.66060 1.40893 1.07299 1.49796
|
|
2498 1.38629 1.38629 1.38629 1.38629
|
|
2499 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
2500 1 2.53331 3.02441 0.20344 2.88069 1 - -
|
|
2501 1.38629 1.38629 1.38629 1.38629
|
|
2502 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2503 2 2.81865 0.23582 2.88868 2.35662 2 - -
|
|
2504 1.38629 1.38629 1.38629 1.38629
|
|
2505 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2506 3 2.53331 3.02441 0.20344 2.88069 3 - -
|
|
2507 1.38629 1.38629 1.38629 1.38629
|
|
2508 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2509 4 2.81865 0.23582 2.88868 2.35662 4 - -
|
|
2510 1.38629 1.38629 1.38629 1.38629
|
|
2511 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2512 5 2.57915 2.25909 2.64442 0.28946 5 - -
|
|
2513 1.38629 1.38629 1.38629 1.38629
|
|
2514 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2515 6 2.53331 3.02441 0.20344 2.88069 6 - -
|
|
2516 1.38629 1.38629 1.38629 1.38629
|
|
2517 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2518 7 2.53331 3.02441 0.20344 2.88069 7 - -
|
|
2519 1.38629 1.38629 1.38629 1.38629
|
|
2520 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2521 8 0.23862 2.84929 2.43386 2.70756 8 - -
|
|
2522 1.38629 1.38629 1.38629 1.38629
|
|
2523 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2524 9 2.53331 3.02441 0.20344 2.88069 9 - -
|
|
2525 1.38629 1.38629 1.38629 1.38629
|
|
2526 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2527 10 2.53331 3.02441 0.20344 2.88069 10 - -
|
|
2528 1.38629 1.38629 1.38629 1.38629
|
|
2529 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2530 11 2.81865 0.23582 2.88868 2.35662 11 - -
|
|
2531 1.38629 1.38629 1.38629 1.38629
|
|
2532 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2533 12 2.57915 2.25909 2.64442 0.28946 12 - -
|
|
2534 1.38629 1.38629 1.38629 1.38629
|
|
2535 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2536 13 2.57915 2.25909 2.64442 0.28946 13 - -
|
|
2537 1.38629 1.38629 1.38629 1.38629
|
|
2538 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2539 14 2.81865 0.23582 2.88868 2.35662 14 - -
|
|
2540 1.38629 1.38629 1.38629 1.38629
|
|
2541 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2542 15 2.53331 3.02441 0.20344 2.88069 15 - -
|
|
2543 1.38629 1.38629 1.38629 1.38629
|
|
2544 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2545 16 2.53331 3.02441 0.20344 2.88069 16 - -
|
|
2546 1.38629 1.38629 1.38629 1.38629
|
|
2547 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2548 17 2.81865 0.23582 2.88868 2.35662 17 - -
|
|
2549 1.38629 1.38629 1.38629 1.38629
|
|
2550 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2551 18 2.57915 2.25909 2.64442 0.28946 18 - -
|
|
2552 1.38629 1.38629 1.38629 1.38629
|
|
2553 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2554 19 2.53331 3.02441 0.20344 2.88069 19 - -
|
|
2555 1.38629 1.38629 1.38629 1.38629
|
|
2556 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2557 20 0.23862 2.84929 2.43386 2.70756 20 - -
|
|
2558 1.38629 1.38629 1.38629 1.38629
|
|
2559 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2560 21 2.81865 0.23582 2.88868 2.35662 21 - -
|
|
2561 1.38629 1.38629 1.38629 1.38629
|
|
2562 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2563 22 0.23862 2.84929 2.43386 2.70756 22 - -
|
|
2564 1.38629 1.38629 1.38629 1.38629
|
|
2565 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2566 23 2.53331 3.02441 0.20344 2.88069 23 - -
|
|
2567 1.38629 1.38629 1.38629 1.38629
|
|
2568 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2569 24 2.81865 0.23582 2.88868 2.35662 24 - -
|
|
2570 1.38629 1.38629 1.38629 1.38629
|
|
2571 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2572 25 0.23862 2.84929 2.43386 2.70756 25 - -
|
|
2573 1.38629 1.38629 1.38629 1.38629
|
|
2574 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2575 26 2.57915 2.25909 2.64442 0.28946 26 - -
|
|
2576 1.38629 1.38629 1.38629 1.38629
|
|
2577 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2578 27 2.53331 3.02441 0.20344 2.88069 27 - -
|
|
2579 1.38629 1.38629 1.38629 1.38629
|
|
2580 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2581 28 2.57915 2.25909 2.64442 0.28946 28 - -
|
|
2582 1.38629 1.38629 1.38629 1.38629
|
|
2583 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2584 29 2.81865 0.23582 2.88868 2.35662 29 - -
|
|
2585 1.38629 1.38629 1.38629 1.38629
|
|
2586 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2587 30 2.57915 2.25909 2.64442 0.28946 30 - -
|
|
2588 1.38629 1.38629 1.38629 1.38629
|
|
2589 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2590 31 2.53331 3.02441 0.20344 2.88069 31 - -
|
|
2591 1.38629 1.38629 1.38629 1.38629
|
|
2592 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2593 32 2.53331 3.02441 0.20344 2.88069 32 - -
|
|
2594 1.38629 1.38629 1.38629 1.38629
|
|
2595 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2596 33 0.23862 2.84929 2.43386 2.70756 33 - -
|
|
2597 1.38629 1.38629 1.38629 1.38629
|
|
2598 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2599 34 2.57915 2.25909 2.64442 0.28946 34 - -
|
|
2600 1.38629 1.38629 1.38629 1.38629
|
|
2601 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2602 35 2.81865 0.23582 2.88868 2.35662 35 - -
|
|
2603 1.38629 1.38629 1.38629 1.38629
|
|
2604 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2605 36 0.23862 2.84929 2.43386 2.70756 36 - -
|
|
2606 1.38629 1.38629 1.38629 1.38629
|
|
2607 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2608 37 2.53331 3.02441 0.20344 2.88069 37 - -
|
|
2609 1.38629 1.38629 1.38629 1.38629
|
|
2610 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2611 38 2.81865 0.23582 2.88868 2.35662 38 - -
|
|
2612 1.38629 1.38629 1.38629 1.38629
|
|
2613 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2614 39 2.53331 3.02441 0.20344 2.88069 39 - -
|
|
2615 1.38629 1.38629 1.38629 1.38629
|
|
2616 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2617 40 2.57915 2.25909 2.64442 0.28946 40 - -
|
|
2618 1.38629 1.38629 1.38629 1.38629
|
|
2619 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2620 41 2.81865 0.23582 2.88868 2.35662 41 - -
|
|
2621 1.38629 1.38629 1.38629 1.38629
|
|
2622 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2623 42 2.53331 3.02441 0.20344 2.88069 42 - -
|
|
2624 1.38629 1.38629 1.38629 1.38629
|
|
2625 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2626 43 0.23862 2.84929 2.43386 2.70756 43 - -
|
|
2627 1.38629 1.38629 1.38629 1.38629
|
|
2628 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2629 44 2.57915 2.25909 2.64442 0.28946 44 - -
|
|
2630 1.38629 1.38629 1.38629 1.38629
|
|
2631 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2632 45 2.53331 3.02441 0.20344 2.88069 45 - -
|
|
2633 1.38629 1.38629 1.38629 1.38629
|
|
2634 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
2635 //
|
|
2636 HMMER3/b [3.0 | March 2010]
|
|
2637 NAME 3_End_Chlorophyta_58S_end_onee_long
|
|
2638 LENG 45
|
|
2639 ALPH DNA
|
|
2640 RF no
|
|
2641 CS no
|
|
2642 MAP yes
|
|
2643 DATE Sat Jan 28 01:04:21 2012
|
|
2644 NSEQ 2
|
|
2645 EFFN 2.000000
|
|
2646 CKSUM 2249999661
|
|
2647 STATS LOCAL MSV -7.5609 0.72738
|
|
2648 STATS LOCAL VITERBI -8.2838 0.72738
|
|
2649 STATS LOCAL FORWARD -3.3217 0.72738
|
|
2650 HMM A C G T
|
|
2651 m->m m->i m->d i->m i->i d->m d->d
|
|
2652 COMPO 1.66646 1.24503 1.16756 1.55104
|
|
2653 1.38629 1.38629 1.38629 1.38629
|
|
2654 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
2655 1 2.53331 3.02441 0.20344 2.88069 1 - -
|
|
2656 1.38629 1.38629 1.38629 1.38629
|
|
2657 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2658 2 2.81865 0.23582 2.88868 2.35662 2 - -
|
|
2659 1.38629 1.38629 1.38629 1.38629
|
|
2660 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2661 3 2.53331 3.02441 0.20344 2.88069 3 - -
|
|
2662 1.38629 1.38629 1.38629 1.38629
|
|
2663 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2664 4 2.81865 0.23582 2.88868 2.35662 4 - -
|
|
2665 1.38629 1.38629 1.38629 1.38629
|
|
2666 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2667 5 2.57915 2.25909 2.64442 0.28946 5 - -
|
|
2668 1.38629 1.38629 1.38629 1.38629
|
|
2669 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2670 6 2.81865 0.23582 2.88868 2.35662 6 - -
|
|
2671 1.38629 1.38629 1.38629 1.38629
|
|
2672 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2673 7 2.53331 3.02441 0.20344 2.88069 7 - -
|
|
2674 1.38629 1.38629 1.38629 1.38629
|
|
2675 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2676 8 0.23862 2.84929 2.43386 2.70756 8 - -
|
|
2677 1.38629 1.38629 1.38629 1.38629
|
|
2678 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2679 9 2.53331 3.02441 0.20344 2.88069 9 - -
|
|
2680 1.38629 1.38629 1.38629 1.38629
|
|
2681 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2682 10 2.53331 3.02441 0.20344 2.88069 10 - -
|
|
2683 1.38629 1.38629 1.38629 1.38629
|
|
2684 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2685 11 2.81865 0.23582 2.88868 2.35662 11 - -
|
|
2686 1.38629 1.38629 1.38629 1.38629
|
|
2687 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2688 12 0.23862 2.84929 2.43386 2.70756 12 - -
|
|
2689 1.38629 1.38629 1.38629 1.38629
|
|
2690 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2691 13 2.57915 2.25909 2.64442 0.28946 13 - -
|
|
2692 1.38629 1.38629 1.38629 1.38629
|
|
2693 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2694 14 2.81865 0.23582 2.88868 2.35662 14 - -
|
|
2695 1.38629 1.38629 1.38629 1.38629
|
|
2696 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2697 15 2.57915 2.25909 2.64442 0.28946 15 - -
|
|
2698 1.38629 1.38629 1.38629 1.38629
|
|
2699 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2700 16 2.53331 3.02441 0.20344 2.88069 16 - -
|
|
2701 1.38629 1.38629 1.38629 1.38629
|
|
2702 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2703 17 2.81865 0.23582 2.88868 2.35662 17 - -
|
|
2704 1.38629 1.38629 1.38629 1.38629
|
|
2705 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2706 18 2.81865 0.23582 2.88868 2.35662 18 - -
|
|
2707 1.38629 1.38629 1.38629 1.38629
|
|
2708 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2709 19 2.53331 3.02441 0.20344 2.88069 19 - -
|
|
2710 1.38629 1.38629 1.38629 1.38629
|
|
2711 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2712 20 0.23862 2.84929 2.43386 2.70756 20 - -
|
|
2713 1.38629 1.38629 1.38629 1.38629
|
|
2714 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2715 21 2.53331 3.02441 0.20344 2.88069 21 - -
|
|
2716 1.38629 1.38629 1.38629 1.38629
|
|
2717 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2718 22 0.23862 2.84929 2.43386 2.70756 22 - -
|
|
2719 1.38629 1.38629 1.38629 1.38629
|
|
2720 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2721 23 2.53331 3.02441 0.20344 2.88069 23 - -
|
|
2722 1.38629 1.38629 1.38629 1.38629
|
|
2723 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2724 24 2.81865 0.23582 2.88868 2.35662 24 - -
|
|
2725 1.38629 1.38629 1.38629 1.38629
|
|
2726 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2727 25 0.23862 2.84929 2.43386 2.70756 25 - -
|
|
2728 1.38629 1.38629 1.38629 1.38629
|
|
2729 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2730 26 2.57915 2.25909 2.64442 0.28946 26 - -
|
|
2731 1.38629 1.38629 1.38629 1.38629
|
|
2732 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2733 27 2.53331 3.02441 0.20344 2.88069 27 - -
|
|
2734 1.38629 1.38629 1.38629 1.38629
|
|
2735 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2736 28 2.57915 2.25909 2.64442 0.28946 28 - -
|
|
2737 1.38629 1.38629 1.38629 1.38629
|
|
2738 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2739 29 2.81865 0.23582 2.88868 2.35662 29 - -
|
|
2740 1.38629 1.38629 1.38629 1.38629
|
|
2741 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2742 30 2.57915 2.25909 2.64442 0.28946 30 - -
|
|
2743 1.38629 1.38629 1.38629 1.38629
|
|
2744 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2745 31 2.53331 3.02441 0.20344 2.88069 31 - -
|
|
2746 1.38629 1.38629 1.38629 1.38629
|
|
2747 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2748 32 2.81865 0.23582 2.88868 2.35662 32 - -
|
|
2749 1.38629 1.38629 1.38629 1.38629
|
|
2750 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2751 33 2.81865 0.23582 2.88868 2.35662 33 - -
|
|
2752 1.38629 1.38629 1.38629 1.38629
|
|
2753 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2754 34 2.57915 2.25909 2.64442 0.28946 34 - -
|
|
2755 1.38629 1.38629 1.38629 1.38629
|
|
2756 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2757 35 2.81865 0.23582 2.88868 2.35662 35 - -
|
|
2758 1.38629 1.38629 1.38629 1.38629
|
|
2759 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2760 36 0.23862 2.84929 2.43386 2.70756 36 - -
|
|
2761 1.38629 1.38629 1.38629 1.38629
|
|
2762 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2763 37 2.53331 3.02441 0.20344 2.88069 37 - -
|
|
2764 1.38629 1.38629 1.38629 1.38629
|
|
2765 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2766 38 2.81865 0.23582 2.88868 2.35662 38 - -
|
|
2767 1.38629 1.38629 1.38629 1.38629
|
|
2768 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2769 39 2.53331 3.02441 0.20344 2.88069 39 - -
|
|
2770 1.38629 1.38629 1.38629 1.38629
|
|
2771 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2772 40 2.57915 2.25909 2.64442 0.28946 40 - -
|
|
2773 1.38629 1.38629 1.38629 1.38629
|
|
2774 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2775 41 2.81865 0.23582 2.88868 2.35662 41 - -
|
|
2776 1.38629 1.38629 1.38629 1.38629
|
|
2777 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2778 42 2.53331 3.02441 0.20344 2.88069 42 - -
|
|
2779 1.38629 1.38629 1.38629 1.38629
|
|
2780 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2781 43 0.23862 2.84929 2.43386 2.70756 43 - -
|
|
2782 1.38629 1.38629 1.38629 1.38629
|
|
2783 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2784 44 2.57915 2.25909 2.64442 0.28946 44 - -
|
|
2785 1.38629 1.38629 1.38629 1.38629
|
|
2786 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
2787 45 2.53331 3.02441 0.20344 2.88069 45 - -
|
|
2788 1.38629 1.38629 1.38629 1.38629
|
|
2789 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
2790 //
|
|
2791 HMMER3/b [3.0 | March 2010]
|
|
2792 NAME 3_End_Chlorophyta_58S_end_seven_long
|
|
2793 LENG 45
|
|
2794 ALPH DNA
|
|
2795 RF no
|
|
2796 CS no
|
|
2797 MAP yes
|
|
2798 DATE Sat Jan 28 01:06:49 2012
|
|
2799 NSEQ 50
|
|
2800 EFFN 3.720093
|
|
2801 CKSUM 357463622
|
|
2802 STATS LOCAL MSV -6.8679 0.71933
|
|
2803 STATS LOCAL VITERBI -7.7200 0.71933
|
|
2804 STATS LOCAL FORWARD -4.4179 0.71933
|
|
2805 HMM A C G T
|
|
2806 m->m m->i m->d i->m i->i d->m d->d
|
|
2807 COMPO 1.55975 1.15919 1.26176 1.64550
|
|
2808 1.38629 1.38629 1.38629 1.38629
|
|
2809 0.03437 4.08094 4.08094 1.46634 0.26236 0.00000 *
|
|
2810 1 3.56985 0.11502 3.61331 2.92754 1 - -
|
|
2811 1.38629 1.38629 1.38629 1.38629
|
|
2812 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
|
|
2813 2 3.56985 0.11502 3.61331 2.92754 2 - -
|
|
2814 1.38629 1.38629 1.38629 1.38629
|
|
2815 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
|
|
2816 3 3.02897 3.70726 0.10488 3.62466 3 - -
|
|
2817 1.38629 1.38629 1.38629 1.38629
|
|
2818 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
|
|
2819 4 3.02897 3.70726 0.10488 3.62466 4 - -
|
|
2820 1.38629 1.38629 1.38629 1.38629
|
|
2821 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
|
|
2822 5 3.21060 2.67254 3.25402 0.16020 5 - -
|
|
2823 1.38629 1.38629 1.38629 1.38629
|
|
2824 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
|
|
2825 6 3.56985 0.11502 3.61331 2.92754 6 - -
|
|
2826 1.38629 1.38629 1.38629 1.38629
|
|
2827 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
|
|
2828 7 3.02897 3.70726 0.10488 3.62466 7 - -
|
|
2829 1.38629 1.38629 1.38629 1.38629
|
|
2830 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
|
|
2831 8 0.12711 3.49946 2.87886 3.41264 8 - -
|
|
2832 1.38629 1.38629 1.38629 1.38629
|
|
2833 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
|
|
2834 9 1.93380 0.79778 1.32089 1.97922 9 - -
|
|
2835 1.38629 1.38629 1.38629 1.38629
|
|
2836 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
|
|
2837 10 2.13834 2.44062 2.72922 0.31502 10 - -
|
|
2838 1.38629 1.38629 1.38629 1.38629
|
|
2839 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
|
|
2840 11 3.56985 0.11502 3.61331 2.92754 11 - -
|
|
2841 1.38629 1.38629 1.38629 1.38629
|
|
2842 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
|
|
2843 12 3.21060 2.67254 3.25402 0.16020 12 - -
|
|
2844 1.38629 1.38629 1.38629 1.38629
|
|
2845 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
|
|
2846 13 3.08820 2.36855 3.13664 0.20166 13 - -
|
|
2847 1.38629 1.38629 1.38629 1.38629
|
|
2848 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
|
|
2849 14 3.56985 0.11502 3.61331 2.92754 14 - -
|
|
2850 1.38629 1.38629 1.38629 1.38629
|
|
2851 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
|
|
2852 15 3.02897 3.70726 0.10488 3.62466 15 - -
|
|
2853 1.38629 1.38629 1.38629 1.38629
|
|
2854 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
|
|
2855 16 3.02897 3.70726 0.10488 3.62466 16 - -
|
|
2856 1.38629 1.38629 1.38629 1.38629
|
|
2857 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
|
|
2858 17 0.27334 2.87968 2.58561 2.22878 17 - -
|
|
2859 1.38629 1.38629 1.38629 1.38629
|
|
2860 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
|
|
2861 18 2.03406 1.52747 0.81004 1.57372 18 - -
|
|
2862 1.38629 1.38629 1.38629 1.38629
|
|
2863 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
|
|
2864 19 3.02897 3.70726 0.10488 3.62466 19 - -
|
|
2865 1.38629 1.38629 1.38629 1.38629
|
|
2866 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
|
|
2867 20 0.12711 3.49946 2.87886 3.41264 20 - -
|
|
2868 1.38629 1.38629 1.38629 1.38629
|
|
2869 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
|
|
2870 21 3.02897 3.70726 0.10488 3.62466 21 - -
|
|
2871 1.38629 1.38629 1.38629 1.38629
|
|
2872 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
|
|
2873 22 0.12711 3.49946 2.87886 3.41264 22 - -
|
|
2874 1.38629 1.38629 1.38629 1.38629
|
|
2875 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
|
|
2876 23 3.56985 0.11502 3.61331 2.92754 23 - -
|
|
2877 1.38629 1.38629 1.38629 1.38629
|
|
2878 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
|
|
2879 24 3.56985 0.11502 3.61331 2.92754 24 - -
|
|
2880 1.38629 1.38629 1.38629 1.38629
|
|
2881 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
|
|
2882 25 0.12711 3.49946 2.87886 3.41264 25 - -
|
|
2883 1.38629 1.38629 1.38629 1.38629
|
|
2884 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
|
|
2885 26 3.56985 0.11502 3.61331 2.92754 26 - -
|
|
2886 1.38629 1.38629 1.38629 1.38629
|
|
2887 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
|
|
2888 27 0.12711 3.49946 2.87886 3.41264 27 - -
|
|
2889 1.38629 1.38629 1.38629 1.38629
|
|
2890 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
|
|
2891 28 3.21060 2.67254 3.25402 0.16020 28 - -
|
|
2892 1.38629 1.38629 1.38629 1.38629
|
|
2893 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
|
|
2894 29 3.56985 0.11502 3.61331 2.92754 29 - -
|
|
2895 1.38629 1.38629 1.38629 1.38629
|
|
2896 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
|
|
2897 30 3.21060 2.67254 3.25402 0.16020 30 - -
|
|
2898 1.38629 1.38629 1.38629 1.38629
|
|
2899 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
|
|
2900 31 3.02897 3.70726 0.10488 3.62466 31 - -
|
|
2901 1.38629 1.38629 1.38629 1.38629
|
|
2902 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
|
|
2903 32 3.33940 0.16483 3.39119 2.49090 32 - -
|
|
2904 1.38629 1.38629 1.38629 1.38629
|
|
2905 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
|
|
2906 33 3.56985 0.11502 3.61331 2.92754 33 - -
|
|
2907 1.38629 1.38629 1.38629 1.38629
|
|
2908 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
|
|
2909 34 3.21060 2.67254 3.25402 0.16020 34 - -
|
|
2910 1.38629 1.38629 1.38629 1.38629
|
|
2911 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
|
|
2912 35 3.56985 0.11502 3.61331 2.92754 35 - -
|
|
2913 1.38629 1.38629 1.38629 1.38629
|
|
2914 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
|
|
2915 36 0.12711 3.49946 2.87886 3.41264 36 - -
|
|
2916 1.38629 1.38629 1.38629 1.38629
|
|
2917 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
|
|
2918 37 3.02897 3.70726 0.10488 3.62466 37 - -
|
|
2919 1.38629 1.38629 1.38629 1.38629
|
|
2920 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
|
|
2921 38 3.56985 0.11502 3.61331 2.92754 38 - -
|
|
2922 1.38629 1.38629 1.38629 1.38629
|
|
2923 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
|
|
2924 39 3.02897 3.70726 0.10488 3.62466 39 - -
|
|
2925 1.38629 1.38629 1.38629 1.38629
|
|
2926 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
|
|
2927 40 3.21060 2.67254 3.25402 0.16020 40 - -
|
|
2928 1.38629 1.38629 1.38629 1.38629
|
|
2929 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
|
|
2930 41 3.56985 0.11502 3.61331 2.92754 41 - -
|
|
2931 1.38629 1.38629 1.38629 1.38629
|
|
2932 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
|
|
2933 42 3.02897 3.70726 0.10488 3.62466 42 - -
|
|
2934 1.38629 1.38629 1.38629 1.38629
|
|
2935 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
|
|
2936 43 3.02897 3.70726 0.10488 3.62466 43 - -
|
|
2937 1.38629 1.38629 1.38629 1.38629
|
|
2938 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
|
|
2939 44 0.28650 3.01784 1.93054 2.89794 44 - -
|
|
2940 1.38629 1.38629 1.38629 1.38629
|
|
2941 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
|
|
2942 45 0.12711 3.49946 2.87886 3.41264 45 - -
|
|
2943 1.38629 1.38629 1.38629 1.38629
|
|
2944 0.01733 4.06390 * 1.46634 0.26236 0.00000 *
|
|
2945 //
|
|
2946 HMMER3/b [3.0 | March 2010]
|
|
2947 NAME 3_End_Chlorophyta_58S_end_seventeena_long
|
|
2948 LENG 45
|
|
2949 ALPH DNA
|
|
2950 RF no
|
|
2951 CS no
|
|
2952 MAP yes
|
|
2953 DATE Sat Jan 28 01:10:11 2012
|
|
2954 NSEQ 29
|
|
2955 EFFN 3.451538
|
|
2956 CKSUM 3894991408
|
|
2957 STATS LOCAL MSV -7.0988 0.71933
|
|
2958 STATS LOCAL VITERBI -7.8238 0.71933
|
|
2959 STATS LOCAL FORWARD -3.7643 0.71933
|
|
2960 HMM A C G T
|
|
2961 m->m m->i m->d i->m i->i d->m d->d
|
|
2962 COMPO 1.92953 1.07117 1.03558 1.85051
|
|
2963 1.38629 1.38629 1.38629 1.38629
|
|
2964 0.03603 4.03451 4.03451 1.46634 0.26236 0.00000 *
|
|
2965 1 3.47958 0.12480 3.52704 2.86271 1 - -
|
|
2966 1.38629 1.38629 1.38629 1.38629
|
|
2967 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
|
|
2968 2 3.47958 0.12480 3.52704 2.86271 2 - -
|
|
2969 1.38629 1.38629 1.38629 1.38629
|
|
2970 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
|
|
2971 3 3.12956 2.62116 3.17614 0.17222 3 - -
|
|
2972 1.38629 1.38629 1.38629 1.38629
|
|
2973 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
|
|
2974 4 3.06193 0.23335 3.12238 2.14323 4 - -
|
|
2975 1.38629 1.38629 1.38629 1.38629
|
|
2976 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
|
|
2977 5 2.97217 0.26645 3.03499 2.00519 5 - -
|
|
2978 1.38629 1.38629 1.38629 1.38629
|
|
2979 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
|
|
2980 6 3.31033 0.16208 3.36320 2.54466 6 - -
|
|
2981 1.38629 1.38629 1.38629 1.38629
|
|
2982 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
|
|
2983 7 2.57191 0.52728 2.64282 1.33850 7 - -
|
|
2984 1.38629 1.38629 1.38629 1.38629
|
|
2985 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
|
|
2986 8 3.12956 2.62116 3.17614 0.17222 8 - -
|
|
2987 1.38629 1.38629 1.38629 1.38629
|
|
2988 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
|
|
2989 9 3.04620 0.23880 3.10708 2.11894 9 - -
|
|
2990 1.38629 1.38629 1.38629 1.38629
|
|
2991 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
|
|
2992 10 2.97549 3.62857 0.11279 3.53751 10 - -
|
|
2993 1.38629 1.38629 1.38629 1.38629
|
|
2994 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
|
|
2995 11 3.47958 0.12480 3.52704 2.86271 11 - -
|
|
2996 1.38629 1.38629 1.38629 1.38629
|
|
2997 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
|
|
2998 12 3.47958 0.12480 3.52704 2.86271 12 - -
|
|
2999 1.38629 1.38629 1.38629 1.38629
|
|
3000 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
|
|
3001 13 2.50245 1.28434 2.57140 0.57119 13 - -
|
|
3002 1.38629 1.38629 1.38629 1.38629
|
|
3003 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
|
|
3004 14 2.80379 1.91051 2.86272 0.30884 14 - -
|
|
3005 1.38629 1.38629 1.38629 1.38629
|
|
3006 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
|
|
3007 15 3.47958 0.12480 3.52704 2.86271 15 - -
|
|
3008 1.38629 1.38629 1.38629 1.38629
|
|
3009 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
|
|
3010 16 2.97549 3.62857 0.11279 3.53751 16 - -
|
|
3011 1.38629 1.38629 1.38629 1.38629
|
|
3012 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
|
|
3013 17 2.97549 3.62857 0.11279 3.53751 17 - -
|
|
3014 1.38629 1.38629 1.38629 1.38629
|
|
3015 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
|
|
3016 18 2.97549 3.62857 0.11279 3.53751 18 - -
|
|
3017 1.38629 1.38629 1.38629 1.38629
|
|
3018 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
|
|
3019 19 3.47958 0.12480 3.52704 2.86271 19 - -
|
|
3020 1.38629 1.38629 1.38629 1.38629
|
|
3021 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
|
|
3022 20 2.97549 3.62857 0.11279 3.53751 20 - -
|
|
3023 1.38629 1.38629 1.38629 1.38629
|
|
3024 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
|
|
3025 21 2.97549 3.62857 0.11279 3.53751 21 - -
|
|
3026 1.38629 1.38629 1.38629 1.38629
|
|
3027 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
|
|
3028 22 0.13668 3.42064 2.82809 3.32616 22 - -
|
|
3029 1.38629 1.38629 1.38629 1.38629
|
|
3030 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
|
|
3031 23 2.97549 3.62857 0.11279 3.53751 23 - -
|
|
3032 1.38629 1.38629 1.38629 1.38629
|
|
3033 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
|
|
3034 24 2.97549 3.62857 0.11279 3.53751 24 - -
|
|
3035 1.38629 1.38629 1.38629 1.38629
|
|
3036 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
|
|
3037 25 2.97549 3.62857 0.11279 3.53751 25 - -
|
|
3038 1.38629 1.38629 1.38629 1.38629
|
|
3039 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
|
|
3040 26 0.13668 3.42064 2.82809 3.32616 26 - -
|
|
3041 1.38629 1.38629 1.38629 1.38629
|
|
3042 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
|
|
3043 27 2.97549 3.62857 0.11279 3.53751 27 - -
|
|
3044 1.38629 1.38629 1.38629 1.38629
|
|
3045 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
|
|
3046 28 2.97549 3.62857 0.11279 3.53751 28 - -
|
|
3047 1.38629 1.38629 1.38629 1.38629
|
|
3048 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
|
|
3049 29 0.13668 3.42064 2.82809 3.32616 29 - -
|
|
3050 1.38629 1.38629 1.38629 1.38629
|
|
3051 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
|
|
3052 30 3.47958 0.12480 3.52704 2.86271 30 - -
|
|
3053 1.38629 1.38629 1.38629 1.38629
|
|
3054 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
|
|
3055 31 2.97549 3.62857 0.11279 3.53751 31 - -
|
|
3056 1.38629 1.38629 1.38629 1.38629
|
|
3057 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
|
|
3058 32 3.47958 0.12480 3.52704 2.86271 32 - -
|
|
3059 1.38629 1.38629 1.38629 1.38629
|
|
3060 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
|
|
3061 33 2.97549 3.62857 0.11279 3.53751 33 - -
|
|
3062 1.38629 1.38629 1.38629 1.38629
|
|
3063 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
|
|
3064 34 3.12956 2.62116 3.17614 0.17222 34 - -
|
|
3065 1.38629 1.38629 1.38629 1.38629
|
|
3066 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
|
|
3067 35 3.47958 0.12480 3.52704 2.86271 35 - -
|
|
3068 1.38629 1.38629 1.38629 1.38629
|
|
3069 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
|
|
3070 36 2.97549 3.62857 0.11279 3.53751 36 - -
|
|
3071 1.38629 1.38629 1.38629 1.38629
|
|
3072 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
|
|
3073 37 2.97549 3.62857 0.11279 3.53751 37 - -
|
|
3074 1.38629 1.38629 1.38629 1.38629
|
|
3075 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
|
|
3076 38 3.47958 0.12480 3.52704 2.86271 38 - -
|
|
3077 1.38629 1.38629 1.38629 1.38629
|
|
3078 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
|
|
3079 39 2.97549 3.62857 0.11279 3.53751 39 - -
|
|
3080 1.38629 1.38629 1.38629 1.38629
|
|
3081 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
|
|
3082 40 0.13668 3.42064 2.82809 3.32616 40 - -
|
|
3083 1.38629 1.38629 1.38629 1.38629
|
|
3084 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
|
|
3085 41 3.47958 0.12480 3.52704 2.86271 41 - -
|
|
3086 1.38629 1.38629 1.38629 1.38629
|
|
3087 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
|
|
3088 42 0.13668 3.42064 2.82809 3.32616 42 - -
|
|
3089 1.38629 1.38629 1.38629 1.38629
|
|
3090 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
|
|
3091 43 3.12956 2.62116 3.17614 0.17222 43 - -
|
|
3092 1.38629 1.38629 1.38629 1.38629
|
|
3093 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
|
|
3094 44 3.47958 0.12480 3.52704 2.86271 44 - -
|
|
3095 1.38629 1.38629 1.38629 1.38629
|
|
3096 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
|
|
3097 45 2.97549 3.62857 0.11279 3.53751 45 - -
|
|
3098 1.38629 1.38629 1.38629 1.38629
|
|
3099 0.01818 4.01666 * 1.46634 0.26236 0.00000 *
|
|
3100 //
|
|
3101 HMMER3/b [3.0 | March 2010]
|
|
3102 NAME 3_End_Chlorophyta_58S_end_seventeenb_long
|
|
3103 LENG 45
|
|
3104 ALPH DNA
|
|
3105 RF no
|
|
3106 CS no
|
|
3107 MAP yes
|
|
3108 DATE Sat Jan 28 01:10:17 2012
|
|
3109 NSEQ 2
|
|
3110 EFFN 2.000000
|
|
3111 CKSUM 249208300
|
|
3112 STATS LOCAL MSV -7.6792 0.72790
|
|
3113 STATS LOCAL VITERBI -8.3766 0.72790
|
|
3114 STATS LOCAL FORWARD -3.4913 0.72790
|
|
3115 HMM A C G T
|
|
3116 m->m m->i m->d i->m i->i d->m d->d
|
|
3117 COMPO 1.81799 1.27937 1.06160 1.54396
|
|
3118 1.38629 1.38629 1.38629 1.38629
|
|
3119 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
3120 1 2.53331 3.02441 0.20344 2.88069 1 - -
|
|
3121 1.38629 1.38629 1.38629 1.38629
|
|
3122 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3123 2 2.57915 2.25909 2.64442 0.28946 2 - -
|
|
3124 1.38629 1.38629 1.38629 1.38629
|
|
3125 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3126 3 2.81865 0.23582 2.88868 2.35662 3 - -
|
|
3127 1.38629 1.38629 1.38629 1.38629
|
|
3128 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3129 4 2.81865 0.23582 2.88868 2.35662 4 - -
|
|
3130 1.38629 1.38629 1.38629 1.38629
|
|
3131 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3132 5 2.57915 2.25909 2.64442 0.28946 5 - -
|
|
3133 1.38629 1.38629 1.38629 1.38629
|
|
3134 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3135 6 2.57915 2.25909 2.64442 0.28946 6 - -
|
|
3136 1.38629 1.38629 1.38629 1.38629
|
|
3137 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3138 7 1.88179 1.10717 1.04597 1.79675 7 - -
|
|
3139 1.38629 1.38629 1.38629 1.38629
|
|
3140 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3141 8 2.81865 0.23582 2.88868 2.35662 8 - -
|
|
3142 1.38629 1.38629 1.38629 1.38629
|
|
3143 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3144 9 2.57915 2.25909 2.64442 0.28946 9 - -
|
|
3145 1.38629 1.38629 1.38629 1.38629
|
|
3146 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3147 10 2.57915 2.25909 2.64442 0.28946 10 - -
|
|
3148 1.38629 1.38629 1.38629 1.38629
|
|
3149 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3150 11 2.81865 0.23582 2.88868 2.35662 11 - -
|
|
3151 1.38629 1.38629 1.38629 1.38629
|
|
3152 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3153 12 2.53331 3.02441 0.20344 2.88069 12 - -
|
|
3154 1.38629 1.38629 1.38629 1.38629
|
|
3155 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3156 13 2.81865 0.23582 2.88868 2.35662 13 - -
|
|
3157 1.38629 1.38629 1.38629 1.38629
|
|
3158 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3159 14 2.57915 2.25909 2.64442 0.28946 14 - -
|
|
3160 1.38629 1.38629 1.38629 1.38629
|
|
3161 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3162 15 2.57915 2.25909 2.64442 0.28946 15 - -
|
|
3163 1.38629 1.38629 1.38629 1.38629
|
|
3164 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3165 16 2.81865 0.23582 2.88868 2.35662 16 - -
|
|
3166 1.38629 1.38629 1.38629 1.38629
|
|
3167 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3168 17 2.53331 3.02441 0.20344 2.88069 17 - -
|
|
3169 1.38629 1.38629 1.38629 1.38629
|
|
3170 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3171 18 2.53331 3.02441 0.20344 2.88069 18 - -
|
|
3172 1.38629 1.38629 1.38629 1.38629
|
|
3173 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3174 19 2.81865 0.23582 2.88868 2.35662 19 - -
|
|
3175 1.38629 1.38629 1.38629 1.38629
|
|
3176 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3177 20 2.53331 3.02441 0.20344 2.88069 20 - -
|
|
3178 1.38629 1.38629 1.38629 1.38629
|
|
3179 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3180 21 2.53331 3.02441 0.20344 2.88069 21 - -
|
|
3181 1.38629 1.38629 1.38629 1.38629
|
|
3182 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3183 22 0.23862 2.84929 2.43386 2.70756 22 - -
|
|
3184 1.38629 1.38629 1.38629 1.38629
|
|
3185 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3186 23 2.53331 3.02441 0.20344 2.88069 23 - -
|
|
3187 1.38629 1.38629 1.38629 1.38629
|
|
3188 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3189 24 2.53331 3.02441 0.20344 2.88069 24 - -
|
|
3190 1.38629 1.38629 1.38629 1.38629
|
|
3191 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3192 25 2.53331 3.02441 0.20344 2.88069 25 - -
|
|
3193 1.38629 1.38629 1.38629 1.38629
|
|
3194 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3195 26 0.23862 2.84929 2.43386 2.70756 26 - -
|
|
3196 1.38629 1.38629 1.38629 1.38629
|
|
3197 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3198 27 2.53331 3.02441 0.20344 2.88069 27 - -
|
|
3199 1.38629 1.38629 1.38629 1.38629
|
|
3200 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3201 28 2.53331 3.02441 0.20344 2.88069 28 - -
|
|
3202 1.38629 1.38629 1.38629 1.38629
|
|
3203 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3204 29 0.23862 2.84929 2.43386 2.70756 29 - -
|
|
3205 1.38629 1.38629 1.38629 1.38629
|
|
3206 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3207 30 2.81865 0.23582 2.88868 2.35662 30 - -
|
|
3208 1.38629 1.38629 1.38629 1.38629
|
|
3209 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3210 31 2.53331 3.02441 0.20344 2.88069 31 - -
|
|
3211 1.38629 1.38629 1.38629 1.38629
|
|
3212 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3213 32 2.81865 0.23582 2.88868 2.35662 32 - -
|
|
3214 1.38629 1.38629 1.38629 1.38629
|
|
3215 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3216 33 2.53331 3.02441 0.20344 2.88069 33 - -
|
|
3217 1.38629 1.38629 1.38629 1.38629
|
|
3218 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3219 34 2.57915 2.25909 2.64442 0.28946 34 - -
|
|
3220 1.38629 1.38629 1.38629 1.38629
|
|
3221 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3222 35 2.81865 0.23582 2.88868 2.35662 35 - -
|
|
3223 1.38629 1.38629 1.38629 1.38629
|
|
3224 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3225 36 2.53331 3.02441 0.20344 2.88069 36 - -
|
|
3226 1.38629 1.38629 1.38629 1.38629
|
|
3227 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3228 37 2.53331 3.02441 0.20344 2.88069 37 - -
|
|
3229 1.38629 1.38629 1.38629 1.38629
|
|
3230 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3231 38 2.81865 0.23582 2.88868 2.35662 38 - -
|
|
3232 1.38629 1.38629 1.38629 1.38629
|
|
3233 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3234 39 2.53331 3.02441 0.20344 2.88069 39 - -
|
|
3235 1.38629 1.38629 1.38629 1.38629
|
|
3236 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3237 40 0.23862 2.84929 2.43386 2.70756 40 - -
|
|
3238 1.38629 1.38629 1.38629 1.38629
|
|
3239 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3240 41 2.81865 0.23582 2.88868 2.35662 41 - -
|
|
3241 1.38629 1.38629 1.38629 1.38629
|
|
3242 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3243 42 0.23862 2.84929 2.43386 2.70756 42 - -
|
|
3244 1.38629 1.38629 1.38629 1.38629
|
|
3245 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3246 43 2.57915 2.25909 2.64442 0.28946 43 - -
|
|
3247 1.38629 1.38629 1.38629 1.38629
|
|
3248 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3249 44 2.81865 0.23582 2.88868 2.35662 44 - -
|
|
3250 1.38629 1.38629 1.38629 1.38629
|
|
3251 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3252 45 2.53331 3.02441 0.20344 2.88069 45 - -
|
|
3253 1.38629 1.38629 1.38629 1.38629
|
|
3254 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
3255 //
|
|
3256 HMMER3/b [3.0 | March 2010]
|
|
3257 NAME 3_End_Chlorophyta_58S_end_six_long
|
|
3258 LENG 45
|
|
3259 ALPH DNA
|
|
3260 RF no
|
|
3261 CS no
|
|
3262 MAP yes
|
|
3263 DATE Sat Jan 28 01:06:39 2012
|
|
3264 NSEQ 17
|
|
3265 EFFN 3.980225
|
|
3266 CKSUM 2906984672
|
|
3267 STATS LOCAL MSV -6.7869 0.71932
|
|
3268 STATS LOCAL VITERBI -7.5454 0.71932
|
|
3269 STATS LOCAL FORWARD -4.0611 0.71932
|
|
3270 HMM A C G T
|
|
3271 m->m m->i m->d i->m i->i d->m d->d
|
|
3272 COMPO 1.85715 1.19405 1.09141 1.58401
|
|
3273 1.38629 1.38629 1.38629 1.38629
|
|
3274 0.03290 4.12394 4.12394 1.46634 0.26236 0.00000 *
|
|
3275 1 3.07541 3.77607 0.09847 3.70103 1 - -
|
|
3276 1.38629 1.38629 1.38629 1.38629
|
|
3277 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
|
|
3278 2 3.64943 0.10712 3.68925 2.98409 2 - -
|
|
3279 1.38629 1.38629 1.38629 1.38629
|
|
3280 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
|
|
3281 3 3.07541 3.77607 0.09847 3.70103 3 - -
|
|
3282 1.38629 1.38629 1.38629 1.38629
|
|
3283 0.12050 4.12394 2.32951 1.46634 0.26236 1.09861 0.40547
|
|
3284 4 2.22469 1.56800 0.55225 2.22762 4 - -
|
|
3285 1.38629 1.38629 1.38629 1.38629
|
|
3286 0.03586 4.03929 4.03929 1.46634 0.26236 0.28702 1.38830
|
|
3287 5 3.28389 2.71903 3.32443 0.15014 5 - -
|
|
3288 1.38629 1.38629 1.38629 1.38629
|
|
3289 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
|
|
3290 6 3.64943 0.10712 3.68925 2.98409 6 - -
|
|
3291 1.38629 1.38629 1.38629 1.38629
|
|
3292 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
|
|
3293 7 3.07541 3.77607 0.09847 3.70103 7 - -
|
|
3294 1.38629 1.38629 1.38629 1.38629
|
|
3295 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
|
|
3296 8 0.28744 2.20718 2.59167 2.73466 8 - -
|
|
3297 1.38629 1.38629 1.38629 1.38629
|
|
3298 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
|
|
3299 9 3.07541 3.77607 0.09847 3.70103 9 - -
|
|
3300 1.38629 1.38629 1.38629 1.38629
|
|
3301 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
|
|
3302 10 3.07541 3.77607 0.09847 3.70103 10 - -
|
|
3303 1.38629 1.38629 1.38629 1.38629
|
|
3304 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
|
|
3305 11 3.64943 0.10712 3.68925 2.98409 11 - -
|
|
3306 1.38629 1.38629 1.38629 1.38629
|
|
3307 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
|
|
3308 12 3.28389 2.71903 3.32443 0.15014 12 - -
|
|
3309 1.38629 1.38629 1.38629 1.38629
|
|
3310 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
|
|
3311 13 2.86749 1.79659 2.92573 0.32342 13 - -
|
|
3312 1.38629 1.38629 1.38629 1.38629
|
|
3313 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
|
|
3314 14 3.64943 0.10712 3.68925 2.98409 14 - -
|
|
3315 1.38629 1.38629 1.38629 1.38629
|
|
3316 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
|
|
3317 15 3.07541 3.77607 0.09847 3.70103 15 - -
|
|
3318 1.38629 1.38629 1.38629 1.38629
|
|
3319 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
|
|
3320 16 3.07541 3.77607 0.09847 3.70103 16 - -
|
|
3321 1.38629 1.38629 1.38629 1.38629
|
|
3322 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
|
|
3323 17 3.64943 0.10712 3.68925 2.98409 17 - -
|
|
3324 1.38629 1.38629 1.38629 1.38629
|
|
3325 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
|
|
3326 18 3.64943 0.10712 3.68925 2.98409 18 - -
|
|
3327 1.38629 1.38629 1.38629 1.38629
|
|
3328 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
|
|
3329 19 0.33002 2.97170 1.76064 2.84832 19 - -
|
|
3330 1.38629 1.38629 1.38629 1.38629
|
|
3331 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
|
|
3332 20 0.11925 3.56948 2.92381 3.48959 20 - -
|
|
3333 1.38629 1.38629 1.38629 1.38629
|
|
3334 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
|
|
3335 21 3.07541 3.77607 0.09847 3.70103 21 - -
|
|
3336 1.38629 1.38629 1.38629 1.38629
|
|
3337 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
|
|
3338 22 0.11925 3.56948 2.92381 3.48959 22 - -
|
|
3339 1.38629 1.38629 1.38629 1.38629
|
|
3340 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
|
|
3341 23 2.40105 0.49799 1.64417 2.22143 23 - -
|
|
3342 1.38629 1.38629 1.38629 1.38629
|
|
3343 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
|
|
3344 24 3.64943 0.10712 3.68925 2.98409 24 - -
|
|
3345 1.38629 1.38629 1.38629 1.38629
|
|
3346 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
|
|
3347 25 0.11925 3.56948 2.92381 3.48959 25 - -
|
|
3348 1.38629 1.38629 1.38629 1.38629
|
|
3349 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
|
|
3350 26 3.28389 2.71903 3.32443 0.15014 26 - -
|
|
3351 1.38629 1.38629 1.38629 1.38629
|
|
3352 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
|
|
3353 27 3.07541 3.77607 0.09847 3.70103 27 - -
|
|
3354 1.38629 1.38629 1.38629 1.38629
|
|
3355 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
|
|
3356 28 3.28389 2.71903 3.32443 0.15014 28 - -
|
|
3357 1.38629 1.38629 1.38629 1.38629
|
|
3358 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
|
|
3359 29 3.17166 0.22292 3.22923 2.13454 29 - -
|
|
3360 1.38629 1.38629 1.38629 1.38629
|
|
3361 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
|
|
3362 30 3.28389 2.71903 3.32443 0.15014 30 - -
|
|
3363 1.38629 1.38629 1.38629 1.38629
|
|
3364 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
|
|
3365 31 3.07541 3.77607 0.09847 3.70103 31 - -
|
|
3366 1.38629 1.38629 1.38629 1.38629
|
|
3367 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
|
|
3368 32 3.64943 0.10712 3.68925 2.98409 32 - -
|
|
3369 1.38629 1.38629 1.38629 1.38629
|
|
3370 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
|
|
3371 33 3.64943 0.10712 3.68925 2.98409 33 - -
|
|
3372 1.38629 1.38629 1.38629 1.38629
|
|
3373 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
|
|
3374 34 3.28389 2.71903 3.32443 0.15014 34 - -
|
|
3375 1.38629 1.38629 1.38629 1.38629
|
|
3376 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
|
|
3377 35 3.64943 0.10712 3.68925 2.98409 35 - -
|
|
3378 1.38629 1.38629 1.38629 1.38629
|
|
3379 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
|
|
3380 36 0.11925 3.56948 2.92381 3.48959 36 - -
|
|
3381 1.38629 1.38629 1.38629 1.38629
|
|
3382 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
|
|
3383 37 3.07541 3.77607 0.09847 3.70103 37 - -
|
|
3384 1.38629 1.38629 1.38629 1.38629
|
|
3385 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
|
|
3386 38 3.64943 0.10712 3.68925 2.98409 38 - -
|
|
3387 1.38629 1.38629 1.38629 1.38629
|
|
3388 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
|
|
3389 39 3.07541 3.77607 0.09847 3.70103 39 - -
|
|
3390 1.38629 1.38629 1.38629 1.38629
|
|
3391 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
|
|
3392 40 3.28389 2.71903 3.32443 0.15014 40 - -
|
|
3393 1.38629 1.38629 1.38629 1.38629
|
|
3394 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
|
|
3395 41 3.64943 0.10712 3.68925 2.98409 41 - -
|
|
3396 1.38629 1.38629 1.38629 1.38629
|
|
3397 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
|
|
3398 42 3.07541 3.77607 0.09847 3.70103 42 - -
|
|
3399 1.38629 1.38629 1.38629 1.38629
|
|
3400 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
|
|
3401 43 3.07541 3.77607 0.09847 3.70103 43 - -
|
|
3402 1.38629 1.38629 1.38629 1.38629
|
|
3403 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
|
|
3404 44 2.38060 2.30790 1.57434 0.50934 44 - -
|
|
3405 1.38629 1.38629 1.38629 1.38629
|
|
3406 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
|
|
3407 45 2.34746 2.51922 0.48655 1.56482 45 - -
|
|
3408 1.38629 1.38629 1.38629 1.38629
|
|
3409 0.01658 4.10763 * 1.46634 0.26236 0.00000 *
|
|
3410 //
|
|
3411 HMMER3/b [3.0 | March 2010]
|
|
3412 NAME 3_End_Chlorophyta_58S_end_sixteena_long
|
|
3413 LENG 45
|
|
3414 ALPH DNA
|
|
3415 RF no
|
|
3416 CS no
|
|
3417 MAP yes
|
|
3418 DATE Sat Jan 28 01:09:41 2012
|
|
3419 NSEQ 6
|
|
3420 EFFN 3.260742
|
|
3421 CKSUM 3078536325
|
|
3422 STATS LOCAL MSV -8.1805 0.71933
|
|
3423 STATS LOCAL VITERBI -7.9042 0.71933
|
|
3424 STATS LOCAL FORWARD -3.9223 0.71933
|
|
3425 HMM A C G T
|
|
3426 m->m m->i m->d i->m i->i d->m d->d
|
|
3427 COMPO 1.82150 1.14689 1.17178 1.55695
|
|
3428 1.38629 1.38629 1.38629 1.38629
|
|
3429 0.03731 4.00017 4.00017 1.46634 0.26236 0.00000 *
|
|
3430 1 3.41001 0.13300 3.46044 2.81215 1 - -
|
|
3431 1.38629 1.38629 1.38629 1.38629
|
|
3432 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
|
|
3433 2 2.93350 3.56738 0.11941 3.46995 2 - -
|
|
3434 1.38629 1.38629 1.38629 1.38629
|
|
3435 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
|
|
3436 3 3.06843 2.58230 3.11735 0.18196 3 - -
|
|
3437 1.38629 1.38629 1.38629 1.38629
|
|
3438 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
|
|
3439 4 3.41001 0.13300 3.46044 2.81215 4 - -
|
|
3440 1.38629 1.38629 1.38629 1.38629
|
|
3441 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
|
|
3442 5 3.41001 0.13300 3.46044 2.81215 5 - -
|
|
3443 1.38629 1.38629 1.38629 1.38629
|
|
3444 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
|
|
3445 6 3.41001 0.13300 3.46044 2.81215 6 - -
|
|
3446 1.38629 1.38629 1.38629 1.38629
|
|
3447 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
|
|
3448 7 3.06843 2.58230 3.11735 0.18196 7 - -
|
|
3449 1.38629 1.38629 1.38629 1.38629
|
|
3450 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
|
|
3451 8 3.06843 2.58230 3.11735 0.18196 8 - -
|
|
3452 1.38629 1.38629 1.38629 1.38629
|
|
3453 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
|
|
3454 9 3.41001 0.13300 3.46044 2.81215 9 - -
|
|
3455 1.38629 1.38629 1.38629 1.38629
|
|
3456 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
|
|
3457 10 2.93350 3.56738 0.11941 3.46995 10 - -
|
|
3458 1.38629 1.38629 1.38629 1.38629
|
|
3459 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
|
|
3460 11 3.41001 0.13300 3.46044 2.81215 11 - -
|
|
3461 1.38629 1.38629 1.38629 1.38629
|
|
3462 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
|
|
3463 12 0.14457 3.36023 2.78889 3.26000 12 - -
|
|
3464 1.38629 1.38629 1.38629 1.38629
|
|
3465 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
|
|
3466 13 2.93350 3.56738 0.11941 3.46995 13 - -
|
|
3467 1.38629 1.38629 1.38629 1.38629
|
|
3468 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
|
|
3469 14 3.41001 0.13300 3.46044 2.81215 14 - -
|
|
3470 1.38629 1.38629 1.38629 1.38629
|
|
3471 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
|
|
3472 15 3.06843 2.58230 3.11735 0.18196 15 - -
|
|
3473 1.38629 1.38629 1.38629 1.38629
|
|
3474 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
|
|
3475 16 3.06843 2.58230 3.11735 0.18196 16 - -
|
|
3476 1.38629 1.38629 1.38629 1.38629
|
|
3477 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
|
|
3478 17 3.41001 0.13300 3.46044 2.81215 17 - -
|
|
3479 1.38629 1.38629 1.38629 1.38629
|
|
3480 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
|
|
3481 18 2.13978 2.25773 0.68256 1.30045 18 - -
|
|
3482 1.38629 1.38629 1.38629 1.38629
|
|
3483 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
|
|
3484 19 2.93350 3.56738 0.11941 3.46995 19 - -
|
|
3485 1.38629 1.38629 1.38629 1.38629
|
|
3486 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
|
|
3487 20 3.06843 2.58230 3.11735 0.18196 20 - -
|
|
3488 1.38629 1.38629 1.38629 1.38629
|
|
3489 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
|
|
3490 21 3.06843 2.58230 3.11735 0.18196 21 - -
|
|
3491 1.38629 1.38629 1.38629 1.38629
|
|
3492 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
|
|
3493 22 2.93350 3.56738 0.11941 3.46995 22 - -
|
|
3494 1.38629 1.38629 1.38629 1.38629
|
|
3495 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
|
|
3496 23 3.41001 0.13300 3.46044 2.81215 23 - -
|
|
3497 1.38629 1.38629 1.38629 1.38629
|
|
3498 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
|
|
3499 24 0.14457 3.36023 2.78889 3.26000 24 - -
|
|
3500 1.38629 1.38629 1.38629 1.38629
|
|
3501 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
|
|
3502 25 0.14457 3.36023 2.78889 3.26000 25 - -
|
|
3503 1.38629 1.38629 1.38629 1.38629
|
|
3504 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
|
|
3505 26 2.93350 3.56738 0.11941 3.46995 26 - -
|
|
3506 1.38629 1.38629 1.38629 1.38629
|
|
3507 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
|
|
3508 27 2.93350 3.56738 0.11941 3.46995 27 - -
|
|
3509 1.38629 1.38629 1.38629 1.38629
|
|
3510 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
|
|
3511 28 2.93350 3.56738 0.11941 3.46995 28 - -
|
|
3512 1.38629 1.38629 1.38629 1.38629
|
|
3513 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
|
|
3514 29 2.93350 3.56738 0.11941 3.46995 29 - -
|
|
3515 1.38629 1.38629 1.38629 1.38629
|
|
3516 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
|
|
3517 30 3.41001 0.13300 3.46044 2.81215 30 - -
|
|
3518 1.38629 1.38629 1.38629 1.38629
|
|
3519 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
|
|
3520 31 2.93350 3.56738 0.11941 3.46995 31 - -
|
|
3521 1.38629 1.38629 1.38629 1.38629
|
|
3522 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
|
|
3523 32 3.41001 0.13300 3.46044 2.81215 32 - -
|
|
3524 1.38629 1.38629 1.38629 1.38629
|
|
3525 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
|
|
3526 33 2.93350 3.56738 0.11941 3.46995 33 - -
|
|
3527 1.38629 1.38629 1.38629 1.38629
|
|
3528 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
|
|
3529 34 3.06843 2.58230 3.11735 0.18196 34 - -
|
|
3530 1.38629 1.38629 1.38629 1.38629
|
|
3531 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
|
|
3532 35 3.41001 0.13300 3.46044 2.81215 35 - -
|
|
3533 1.38629 1.38629 1.38629 1.38629
|
|
3534 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
|
|
3535 36 2.93350 3.56738 0.11941 3.46995 36 - -
|
|
3536 1.38629 1.38629 1.38629 1.38629
|
|
3537 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
|
|
3538 37 2.93350 3.56738 0.11941 3.46995 37 - -
|
|
3539 1.38629 1.38629 1.38629 1.38629
|
|
3540 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
|
|
3541 38 3.41001 0.13300 3.46044 2.81215 38 - -
|
|
3542 1.38629 1.38629 1.38629 1.38629
|
|
3543 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
|
|
3544 39 0.14457 3.36023 2.78889 3.26000 39 - -
|
|
3545 1.38629 1.38629 1.38629 1.38629
|
|
3546 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
|
|
3547 40 0.14457 3.36023 2.78889 3.26000 40 - -
|
|
3548 1.38629 1.38629 1.38629 1.38629
|
|
3549 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
|
|
3550 41 3.41001 0.13300 3.46044 2.81215 41 - -
|
|
3551 1.38629 1.38629 1.38629 1.38629
|
|
3552 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
|
|
3553 42 0.14457 3.36023 2.78889 3.26000 42 - -
|
|
3554 1.38629 1.38629 1.38629 1.38629
|
|
3555 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
|
|
3556 43 3.06843 2.58230 3.11735 0.18196 43 - -
|
|
3557 1.38629 1.38629 1.38629 1.38629
|
|
3558 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
|
|
3559 44 3.41001 0.13300 3.46044 2.81215 44 - -
|
|
3560 1.38629 1.38629 1.38629 1.38629
|
|
3561 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
|
|
3562 45 2.93350 3.56738 0.11941 3.46995 45 - -
|
|
3563 1.38629 1.38629 1.38629 1.38629
|
|
3564 0.01883 3.98169 * 1.46634 0.26236 0.00000 *
|
|
3565 //
|
|
3566 HMMER3/b [3.0 | March 2010]
|
|
3567 NAME 3_End_Chlorophyta_58S_end_sixteenb_long
|
|
3568 LENG 45
|
|
3569 ALPH DNA
|
|
3570 RF no
|
|
3571 CS no
|
|
3572 MAP yes
|
|
3573 DATE Sat Jan 28 01:09:50 2012
|
|
3574 NSEQ 3
|
|
3575 EFFN 3.000000
|
|
3576 CKSUM 3471750801
|
|
3577 STATS LOCAL MSV -8.0728 0.71994
|
|
3578 STATS LOCAL VITERBI -7.9293 0.71994
|
|
3579 STATS LOCAL FORWARD -3.8206 0.71994
|
|
3580 HMM A C G T
|
|
3581 m->m m->i m->d i->m i->i d->m d->d
|
|
3582 COMPO 1.81571 1.20993 1.15028 1.50278
|
|
3583 1.38629 1.38629 1.38629 1.38629
|
|
3584 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
|
|
3585 1 2.97980 2.52563 3.03204 0.19727 1 - -
|
|
3586 1.38629 1.38629 1.38629 1.38629
|
|
3587 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
3588 2 3.30705 0.14631 3.36166 2.73626 2 - -
|
|
3589 1.38629 1.38629 1.38629 1.38629
|
|
3590 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
3591 3 3.30705 0.14631 3.36166 2.73626 3 - -
|
|
3592 1.38629 1.38629 1.38629 1.38629
|
|
3593 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
3594 4 3.30705 0.14631 3.36166 2.73626 4 - -
|
|
3595 1.38629 1.38629 1.38629 1.38629
|
|
3596 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
3597 5 2.97980 2.52563 3.03204 0.19727 5 - -
|
|
3598 1.38629 1.38629 1.38629 1.38629
|
|
3599 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
3600 6 2.97980 2.52563 3.03204 0.19727 6 - -
|
|
3601 1.38629 1.38629 1.38629 1.38629
|
|
3602 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
3603 7 3.30705 0.14631 3.36166 2.73626 7 - -
|
|
3604 1.38629 1.38629 1.38629 1.38629
|
|
3605 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
3606 8 2.86982 3.47591 0.13017 3.36931 8 - -
|
|
3607 1.38629 1.38629 1.38629 1.38629
|
|
3608 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
3609 9 3.30705 0.14631 3.36166 2.73626 9 - -
|
|
3610 1.38629 1.38629 1.38629 1.38629
|
|
3611 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
3612 10 0.15719 3.27118 2.73043 3.16274 10 - -
|
|
3613 1.38629 1.38629 1.38629 1.38629
|
|
3614 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
3615 11 2.86982 3.47591 0.13017 3.36931 11 - -
|
|
3616 1.38629 1.38629 1.38629 1.38629
|
|
3617 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
3618 12 2.97980 2.52563 3.03204 0.19727 12 - -
|
|
3619 1.38629 1.38629 1.38629 1.38629
|
|
3620 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
3621 13 3.30705 0.14631 3.36166 2.73626 13 - -
|
|
3622 1.38629 1.38629 1.38629 1.38629
|
|
3623 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
3624 14 2.97980 2.52563 3.03204 0.19727 14 - -
|
|
3625 1.38629 1.38629 1.38629 1.38629
|
|
3626 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
3627 15 2.97980 2.52563 3.03204 0.19727 15 - -
|
|
3628 1.38629 1.38629 1.38629 1.38629
|
|
3629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
3630 16 3.30705 0.14631 3.36166 2.73626 16 - -
|
|
3631 1.38629 1.38629 1.38629 1.38629
|
|
3632 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
3633 17 2.86982 3.47591 0.13017 3.36931 17 - -
|
|
3634 1.38629 1.38629 1.38629 1.38629
|
|
3635 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
3636 18 2.86982 3.47591 0.13017 3.36931 18 - -
|
|
3637 1.38629 1.38629 1.38629 1.38629
|
|
3638 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
3639 19 2.86982 3.47591 0.13017 3.36931 19 - -
|
|
3640 1.38629 1.38629 1.38629 1.38629
|
|
3641 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
3642 20 2.97980 2.52563 3.03204 0.19727 20 - -
|
|
3643 1.38629 1.38629 1.38629 1.38629
|
|
3644 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
3645 21 2.97980 2.52563 3.03204 0.19727 21 - -
|
|
3646 1.38629 1.38629 1.38629 1.38629
|
|
3647 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
3648 22 2.86982 3.47591 0.13017 3.36931 22 - -
|
|
3649 1.38629 1.38629 1.38629 1.38629
|
|
3650 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
3651 23 3.30705 0.14631 3.36166 2.73626 23 - -
|
|
3652 1.38629 1.38629 1.38629 1.38629
|
|
3653 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
3654 24 0.15719 3.27118 2.73043 3.16274 24 - -
|
|
3655 1.38629 1.38629 1.38629 1.38629
|
|
3656 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
3657 25 0.15719 3.27118 2.73043 3.16274 25 - -
|
|
3658 1.38629 1.38629 1.38629 1.38629
|
|
3659 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
3660 26 2.86982 3.47591 0.13017 3.36931 26 - -
|
|
3661 1.38629 1.38629 1.38629 1.38629
|
|
3662 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
3663 27 2.86982 3.47591 0.13017 3.36931 27 - -
|
|
3664 1.38629 1.38629 1.38629 1.38629
|
|
3665 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
3666 28 2.86982 3.47591 0.13017 3.36931 28 - -
|
|
3667 1.38629 1.38629 1.38629 1.38629
|
|
3668 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
3669 29 2.86982 3.47591 0.13017 3.36931 29 - -
|
|
3670 1.38629 1.38629 1.38629 1.38629
|
|
3671 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
3672 30 3.30705 0.14631 3.36166 2.73626 30 - -
|
|
3673 1.38629 1.38629 1.38629 1.38629
|
|
3674 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
3675 31 2.86982 3.47591 0.13017 3.36931 31 - -
|
|
3676 1.38629 1.38629 1.38629 1.38629
|
|
3677 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
3678 32 3.30705 0.14631 3.36166 2.73626 32 - -
|
|
3679 1.38629 1.38629 1.38629 1.38629
|
|
3680 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
3681 33 2.86982 3.47591 0.13017 3.36931 33 - -
|
|
3682 1.38629 1.38629 1.38629 1.38629
|
|
3683 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
3684 34 2.97980 2.52563 3.03204 0.19727 34 - -
|
|
3685 1.38629 1.38629 1.38629 1.38629
|
|
3686 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
3687 35 3.30705 0.14631 3.36166 2.73626 35 - -
|
|
3688 1.38629 1.38629 1.38629 1.38629
|
|
3689 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
3690 36 2.86982 3.47591 0.13017 3.36931 36 - -
|
|
3691 1.38629 1.38629 1.38629 1.38629
|
|
3692 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
3693 37 2.86982 3.47591 0.13017 3.36931 37 - -
|
|
3694 1.38629 1.38629 1.38629 1.38629
|
|
3695 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
3696 38 3.30705 0.14631 3.36166 2.73626 38 - -
|
|
3697 1.38629 1.38629 1.38629 1.38629
|
|
3698 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
3699 39 0.15719 3.27118 2.73043 3.16274 39 - -
|
|
3700 1.38629 1.38629 1.38629 1.38629
|
|
3701 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
3702 40 0.15719 3.27118 2.73043 3.16274 40 - -
|
|
3703 1.38629 1.38629 1.38629 1.38629
|
|
3704 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
3705 41 3.30705 0.14631 3.36166 2.73626 41 - -
|
|
3706 1.38629 1.38629 1.38629 1.38629
|
|
3707 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
3708 42 0.15719 3.27118 2.73043 3.16274 42 - -
|
|
3709 1.38629 1.38629 1.38629 1.38629
|
|
3710 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
3711 43 2.97980 2.52563 3.03204 0.19727 43 - -
|
|
3712 1.38629 1.38629 1.38629 1.38629
|
|
3713 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
3714 44 3.30705 0.14631 3.36166 2.73626 44 - -
|
|
3715 1.38629 1.38629 1.38629 1.38629
|
|
3716 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
3717 45 2.86982 3.47591 0.13017 3.36931 45 - -
|
|
3718 1.38629 1.38629 1.38629 1.38629
|
|
3719 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
|
|
3720 //
|
|
3721 HMMER3/b [3.0 | March 2010]
|
|
3722 NAME 3_End_Chlorophyta_58S_end_sixteenc_long
|
|
3723 LENG 45
|
|
3724 ALPH DNA
|
|
3725 RF no
|
|
3726 CS no
|
|
3727 MAP yes
|
|
3728 DATE Sat Jan 28 01:09:56 2012
|
|
3729 NSEQ 2
|
|
3730 EFFN 2.000000
|
|
3731 CKSUM 4112059469
|
|
3732 STATS LOCAL MSV -7.5858 0.72737
|
|
3733 STATS LOCAL VITERBI -8.4289 0.72737
|
|
3734 STATS LOCAL FORWARD -3.3634 0.72737
|
|
3735 HMM A C G T
|
|
3736 m->m m->i m->d i->m i->i d->m d->d
|
|
3737 COMPO 1.74703 1.19425 1.17291 1.54500
|
|
3738 1.38629 1.38629 1.38629 1.38629
|
|
3739 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
3740 1 2.57915 2.25909 2.64442 0.28946 1 - -
|
|
3741 1.38629 1.38629 1.38629 1.38629
|
|
3742 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3743 2 2.81865 0.23582 2.88868 2.35662 2 - -
|
|
3744 1.38629 1.38629 1.38629 1.38629
|
|
3745 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3746 3 2.81865 0.23582 2.88868 2.35662 3 - -
|
|
3747 1.38629 1.38629 1.38629 1.38629
|
|
3748 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3749 4 2.81865 0.23582 2.88868 2.35662 4 - -
|
|
3750 1.38629 1.38629 1.38629 1.38629
|
|
3751 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3752 5 2.57915 2.25909 2.64442 0.28946 5 - -
|
|
3753 1.38629 1.38629 1.38629 1.38629
|
|
3754 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3755 6 2.57915 2.25909 2.64442 0.28946 6 - -
|
|
3756 1.38629 1.38629 1.38629 1.38629
|
|
3757 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3758 7 2.81865 0.23582 2.88868 2.35662 7 - -
|
|
3759 1.38629 1.38629 1.38629 1.38629
|
|
3760 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3761 8 2.53331 3.02441 0.20344 2.88069 8 - -
|
|
3762 1.38629 1.38629 1.38629 1.38629
|
|
3763 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3764 9 2.81865 0.23582 2.88868 2.35662 9 - -
|
|
3765 1.38629 1.38629 1.38629 1.38629
|
|
3766 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3767 10 0.23862 2.84929 2.43386 2.70756 10 - -
|
|
3768 1.38629 1.38629 1.38629 1.38629
|
|
3769 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3770 11 2.53331 3.02441 0.20344 2.88069 11 - -
|
|
3771 1.38629 1.38629 1.38629 1.38629
|
|
3772 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3773 12 2.81865 0.23582 2.88868 2.35662 12 - -
|
|
3774 1.38629 1.38629 1.38629 1.38629
|
|
3775 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3776 13 2.57915 2.25909 2.64442 0.28946 13 - -
|
|
3777 1.38629 1.38629 1.38629 1.38629
|
|
3778 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3779 14 2.57915 2.25909 2.64442 0.28946 14 - -
|
|
3780 1.38629 1.38629 1.38629 1.38629
|
|
3781 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3782 15 2.81865 0.23582 2.88868 2.35662 15 - -
|
|
3783 1.38629 1.38629 1.38629 1.38629
|
|
3784 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3785 16 2.81865 0.23582 2.88868 2.35662 16 - -
|
|
3786 1.38629 1.38629 1.38629 1.38629
|
|
3787 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3788 17 2.53331 3.02441 0.20344 2.88069 17 - -
|
|
3789 1.38629 1.38629 1.38629 1.38629
|
|
3790 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3791 18 2.53331 3.02441 0.20344 2.88069 18 - -
|
|
3792 1.38629 1.38629 1.38629 1.38629
|
|
3793 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3794 19 2.53331 3.02441 0.20344 2.88069 19 - -
|
|
3795 1.38629 1.38629 1.38629 1.38629
|
|
3796 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3797 20 2.57915 2.25909 2.64442 0.28946 20 - -
|
|
3798 1.38629 1.38629 1.38629 1.38629
|
|
3799 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3800 21 2.57915 2.25909 2.64442 0.28946 21 - -
|
|
3801 1.38629 1.38629 1.38629 1.38629
|
|
3802 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3803 22 2.53331 3.02441 0.20344 2.88069 22 - -
|
|
3804 1.38629 1.38629 1.38629 1.38629
|
|
3805 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3806 23 2.81865 0.23582 2.88868 2.35662 23 - -
|
|
3807 1.38629 1.38629 1.38629 1.38629
|
|
3808 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3809 24 0.23862 2.84929 2.43386 2.70756 24 - -
|
|
3810 1.38629 1.38629 1.38629 1.38629
|
|
3811 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3812 25 0.23862 2.84929 2.43386 2.70756 25 - -
|
|
3813 1.38629 1.38629 1.38629 1.38629
|
|
3814 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3815 26 2.53331 3.02441 0.20344 2.88069 26 - -
|
|
3816 1.38629 1.38629 1.38629 1.38629
|
|
3817 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3818 27 2.53331 3.02441 0.20344 2.88069 27 - -
|
|
3819 1.38629 1.38629 1.38629 1.38629
|
|
3820 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3821 28 2.53331 3.02441 0.20344 2.88069 28 - -
|
|
3822 1.38629 1.38629 1.38629 1.38629
|
|
3823 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3824 29 2.53331 3.02441 0.20344 2.88069 29 - -
|
|
3825 1.38629 1.38629 1.38629 1.38629
|
|
3826 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3827 30 2.81865 0.23582 2.88868 2.35662 30 - -
|
|
3828 1.38629 1.38629 1.38629 1.38629
|
|
3829 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3830 31 2.53331 3.02441 0.20344 2.88069 31 - -
|
|
3831 1.38629 1.38629 1.38629 1.38629
|
|
3832 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3833 32 2.81865 0.23582 2.88868 2.35662 32 - -
|
|
3834 1.38629 1.38629 1.38629 1.38629
|
|
3835 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3836 33 2.53331 3.02441 0.20344 2.88069 33 - -
|
|
3837 1.38629 1.38629 1.38629 1.38629
|
|
3838 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3839 34 2.57915 2.25909 2.64442 0.28946 34 - -
|
|
3840 1.38629 1.38629 1.38629 1.38629
|
|
3841 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3842 35 2.81865 0.23582 2.88868 2.35662 35 - -
|
|
3843 1.38629 1.38629 1.38629 1.38629
|
|
3844 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3845 36 2.53331 3.02441 0.20344 2.88069 36 - -
|
|
3846 1.38629 1.38629 1.38629 1.38629
|
|
3847 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3848 37 2.53331 3.02441 0.20344 2.88069 37 - -
|
|
3849 1.38629 1.38629 1.38629 1.38629
|
|
3850 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3851 38 2.81865 0.23582 2.88868 2.35662 38 - -
|
|
3852 1.38629 1.38629 1.38629 1.38629
|
|
3853 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3854 39 0.23862 2.84929 2.43386 2.70756 39 - -
|
|
3855 1.38629 1.38629 1.38629 1.38629
|
|
3856 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3857 40 0.23862 2.84929 2.43386 2.70756 40 - -
|
|
3858 1.38629 1.38629 1.38629 1.38629
|
|
3859 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3860 41 2.81865 0.23582 2.88868 2.35662 41 - -
|
|
3861 1.38629 1.38629 1.38629 1.38629
|
|
3862 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3863 42 0.23862 2.84929 2.43386 2.70756 42 - -
|
|
3864 1.38629 1.38629 1.38629 1.38629
|
|
3865 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3866 43 2.57915 2.25909 2.64442 0.28946 43 - -
|
|
3867 1.38629 1.38629 1.38629 1.38629
|
|
3868 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3869 44 2.81865 0.23582 2.88868 2.35662 44 - -
|
|
3870 1.38629 1.38629 1.38629 1.38629
|
|
3871 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3872 45 2.53331 3.02441 0.20344 2.88069 45 - -
|
|
3873 1.38629 1.38629 1.38629 1.38629
|
|
3874 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
3875 //
|
|
3876 HMMER3/b [3.0 | March 2010]
|
|
3877 NAME 3_End_Chlorophyta_58S_end_tena_long
|
|
3878 LENG 45
|
|
3879 ALPH DNA
|
|
3880 RF no
|
|
3881 CS no
|
|
3882 MAP yes
|
|
3883 DATE Sat Jan 28 01:07:19 2012
|
|
3884 NSEQ 2
|
|
3885 EFFN 2.000000
|
|
3886 CKSUM 591123521
|
|
3887 STATS LOCAL MSV -7.5741 0.72700
|
|
3888 STATS LOCAL VITERBI -8.3318 0.72700
|
|
3889 STATS LOCAL FORWARD -3.2610 0.72700
|
|
3890 HMM A C G T
|
|
3891 m->m m->i m->d i->m i->i d->m d->d
|
|
3892 COMPO 1.74607 1.20240 1.07782 1.68885
|
|
3893 1.38629 1.38629 1.38629 1.38629
|
|
3894 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
3895 1 2.53331 3.02441 0.20344 2.88069 1 - -
|
|
3896 1.38629 1.38629 1.38629 1.38629
|
|
3897 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3898 2 2.81865 0.23582 2.88868 2.35662 2 - -
|
|
3899 1.38629 1.38629 1.38629 1.38629
|
|
3900 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3901 3 2.53331 3.02441 0.20344 2.88069 3 - -
|
|
3902 1.38629 1.38629 1.38629 1.38629
|
|
3903 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3904 4 2.81865 0.23582 2.88868 2.35662 4 - -
|
|
3905 1.38629 1.38629 1.38629 1.38629
|
|
3906 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3907 5 2.81865 0.23582 2.88868 2.35662 5 - -
|
|
3908 1.38629 1.38629 1.38629 1.38629
|
|
3909 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3910 6 2.81865 0.23582 2.88868 2.35662 6 - -
|
|
3911 1.38629 1.38629 1.38629 1.38629
|
|
3912 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3913 7 2.53331 3.02441 0.20344 2.88069 7 - -
|
|
3914 1.38629 1.38629 1.38629 1.38629
|
|
3915 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3916 8 0.23862 2.84929 2.43386 2.70756 8 - -
|
|
3917 1.38629 1.38629 1.38629 1.38629
|
|
3918 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3919 9 2.53331 3.02441 0.20344 2.88069 9 - -
|
|
3920 1.38629 1.38629 1.38629 1.38629
|
|
3921 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3922 10 2.53331 3.02441 0.20344 2.88069 10 - -
|
|
3923 1.38629 1.38629 1.38629 1.38629
|
|
3924 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3925 11 2.81865 0.23582 2.88868 2.35662 11 - -
|
|
3926 1.38629 1.38629 1.38629 1.38629
|
|
3927 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3928 12 2.57915 2.25909 2.64442 0.28946 12 - -
|
|
3929 1.38629 1.38629 1.38629 1.38629
|
|
3930 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3931 13 2.57915 2.25909 2.64442 0.28946 13 - -
|
|
3932 1.38629 1.38629 1.38629 1.38629
|
|
3933 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3934 14 2.81865 0.23582 2.88868 2.35662 14 - -
|
|
3935 1.38629 1.38629 1.38629 1.38629
|
|
3936 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3937 15 2.53331 3.02441 0.20344 2.88069 15 - -
|
|
3938 1.38629 1.38629 1.38629 1.38629
|
|
3939 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3940 16 2.53331 3.02441 0.20344 2.88069 16 - -
|
|
3941 1.38629 1.38629 1.38629 1.38629
|
|
3942 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3943 17 2.81865 0.23582 2.88868 2.35662 17 - -
|
|
3944 1.38629 1.38629 1.38629 1.38629
|
|
3945 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3946 18 2.81865 0.23582 2.88868 2.35662 18 - -
|
|
3947 1.38629 1.38629 1.38629 1.38629
|
|
3948 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3949 19 2.53331 3.02441 0.20344 2.88069 19 - -
|
|
3950 1.38629 1.38629 1.38629 1.38629
|
|
3951 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3952 20 0.23862 2.84929 2.43386 2.70756 20 - -
|
|
3953 1.38629 1.38629 1.38629 1.38629
|
|
3954 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3955 21 2.53331 3.02441 0.20344 2.88069 21 - -
|
|
3956 1.38629 1.38629 1.38629 1.38629
|
|
3957 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3958 22 2.53331 3.02441 0.20344 2.88069 22 - -
|
|
3959 1.38629 1.38629 1.38629 1.38629
|
|
3960 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3961 23 2.53331 3.02441 0.20344 2.88069 23 - -
|
|
3962 1.38629 1.38629 1.38629 1.38629
|
|
3963 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3964 24 2.81865 0.23582 2.88868 2.35662 24 - -
|
|
3965 1.38629 1.38629 1.38629 1.38629
|
|
3966 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3967 25 0.23862 2.84929 2.43386 2.70756 25 - -
|
|
3968 1.38629 1.38629 1.38629 1.38629
|
|
3969 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3970 26 2.57915 2.25909 2.64442 0.28946 26 - -
|
|
3971 1.38629 1.38629 1.38629 1.38629
|
|
3972 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3973 27 0.23862 2.84929 2.43386 2.70756 27 - -
|
|
3974 1.38629 1.38629 1.38629 1.38629
|
|
3975 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3976 28 2.57915 2.25909 2.64442 0.28946 28 - -
|
|
3977 1.38629 1.38629 1.38629 1.38629
|
|
3978 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3979 29 2.81865 0.23582 2.88868 2.35662 29 - -
|
|
3980 1.38629 1.38629 1.38629 1.38629
|
|
3981 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3982 30 2.57915 2.25909 2.64442 0.28946 30 - -
|
|
3983 1.38629 1.38629 1.38629 1.38629
|
|
3984 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3985 31 2.53331 3.02441 0.20344 2.88069 31 - -
|
|
3986 1.38629 1.38629 1.38629 1.38629
|
|
3987 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3988 32 2.81865 0.23582 2.88868 2.35662 32 - -
|
|
3989 1.38629 1.38629 1.38629 1.38629
|
|
3990 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3991 33 2.81865 0.23582 2.88868 2.35662 33 - -
|
|
3992 1.38629 1.38629 1.38629 1.38629
|
|
3993 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3994 34 2.57915 2.25909 2.64442 0.28946 34 - -
|
|
3995 1.38629 1.38629 1.38629 1.38629
|
|
3996 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
3997 35 2.53331 3.02441 0.20344 2.88069 35 - -
|
|
3998 1.38629 1.38629 1.38629 1.38629
|
|
3999 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4000 36 0.23862 2.84929 2.43386 2.70756 36 - -
|
|
4001 1.38629 1.38629 1.38629 1.38629
|
|
4002 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4003 37 2.53331 3.02441 0.20344 2.88069 37 - -
|
|
4004 1.38629 1.38629 1.38629 1.38629
|
|
4005 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4006 38 2.81865 0.23582 2.88868 2.35662 38 - -
|
|
4007 1.38629 1.38629 1.38629 1.38629
|
|
4008 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4009 39 2.53331 3.02441 0.20344 2.88069 39 - -
|
|
4010 1.38629 1.38629 1.38629 1.38629
|
|
4011 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4012 40 2.57915 2.25909 2.64442 0.28946 40 - -
|
|
4013 1.38629 1.38629 1.38629 1.38629
|
|
4014 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4015 41 2.81865 0.23582 2.88868 2.35662 41 - -
|
|
4016 1.38629 1.38629 1.38629 1.38629
|
|
4017 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4018 42 0.23862 2.84929 2.43386 2.70756 42 - -
|
|
4019 1.38629 1.38629 1.38629 1.38629
|
|
4020 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4021 43 2.53331 3.02441 0.20344 2.88069 43 - -
|
|
4022 1.38629 1.38629 1.38629 1.38629
|
|
4023 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4024 44 2.81865 0.23582 2.88868 2.35662 44 - -
|
|
4025 1.38629 1.38629 1.38629 1.38629
|
|
4026 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4027 45 2.53331 3.02441 0.20344 2.88069 45 - -
|
|
4028 1.38629 1.38629 1.38629 1.38629
|
|
4029 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
4030 //
|
|
4031 HMMER3/b [3.0 | March 2010]
|
|
4032 NAME 3_End_Chlorophyta_58S_end_tenb_long
|
|
4033 LENG 45
|
|
4034 ALPH DNA
|
|
4035 RF no
|
|
4036 CS no
|
|
4037 MAP yes
|
|
4038 DATE Sat Jan 28 01:07:25 2012
|
|
4039 NSEQ 5
|
|
4040 EFFN 3.247070
|
|
4041 CKSUM 2521986931
|
|
4042 STATS LOCAL MSV -8.1587 0.71933
|
|
4043 STATS LOCAL VITERBI -7.8377 0.71933
|
|
4044 STATS LOCAL FORWARD -3.8876 0.71933
|
|
4045 HMM A C G T
|
|
4046 m->m m->i m->d i->m i->i d->m d->d
|
|
4047 COMPO 1.67141 1.26560 1.12663 1.58072
|
|
4048 1.38629 1.38629 1.38629 1.38629
|
|
4049 0.03741 3.99766 3.99766 1.46634 0.26236 0.00000 *
|
|
4050 1 2.93035 3.56282 0.11992 3.46492 1 - -
|
|
4051 1.38629 1.38629 1.38629 1.38629
|
|
4052 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
4053 2 3.40484 0.13363 3.45549 2.80837 2 - -
|
|
4054 1.38629 1.38629 1.38629 1.38629
|
|
4055 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
4056 3 0.14518 3.35575 2.78597 3.25510 3 - -
|
|
4057 1.38629 1.38629 1.38629 1.38629
|
|
4058 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
4059 4 3.40484 0.13363 3.45549 2.80837 4 - -
|
|
4060 1.38629 1.38629 1.38629 1.38629
|
|
4061 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
4062 5 3.06393 2.57943 3.11303 0.18271 5 - -
|
|
4063 1.38629 1.38629 1.38629 1.38629
|
|
4064 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
4065 6 3.40484 0.13363 3.45549 2.80837 6 - -
|
|
4066 1.38629 1.38629 1.38629 1.38629
|
|
4067 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
4068 7 2.93035 3.56282 0.11992 3.46492 7 - -
|
|
4069 1.38629 1.38629 1.38629 1.38629
|
|
4070 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
4071 8 0.14518 3.35575 2.78597 3.25510 8 - -
|
|
4072 1.38629 1.38629 1.38629 1.38629
|
|
4073 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
4074 9 2.93035 3.56282 0.11992 3.46492 9 - -
|
|
4075 1.38629 1.38629 1.38629 1.38629
|
|
4076 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
4077 10 2.93035 3.56282 0.11992 3.46492 10 - -
|
|
4078 1.38629 1.38629 1.38629 1.38629
|
|
4079 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
4080 11 3.40484 0.13363 3.45549 2.80837 11 - -
|
|
4081 1.38629 1.38629 1.38629 1.38629
|
|
4082 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
4083 12 3.06393 2.57943 3.11303 0.18271 12 - -
|
|
4084 1.38629 1.38629 1.38629 1.38629
|
|
4085 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
4086 13 3.06393 2.57943 3.11303 0.18271 13 - -
|
|
4087 1.38629 1.38629 1.38629 1.38629
|
|
4088 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
4089 14 3.40484 0.13363 3.45549 2.80837 14 - -
|
|
4090 1.38629 1.38629 1.38629 1.38629
|
|
4091 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
4092 15 2.93035 3.56282 0.11992 3.46492 15 - -
|
|
4093 1.38629 1.38629 1.38629 1.38629
|
|
4094 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
4095 16 2.93035 3.56282 0.11992 3.46492 16 - -
|
|
4096 1.38629 1.38629 1.38629 1.38629
|
|
4097 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
4098 17 3.40484 0.13363 3.45549 2.80837 17 - -
|
|
4099 1.38629 1.38629 1.38629 1.38629
|
|
4100 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
4101 18 3.40484 0.13363 3.45549 2.80837 18 - -
|
|
4102 1.38629 1.38629 1.38629 1.38629
|
|
4103 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
4104 19 0.64364 2.54320 1.18656 2.39976 19 - -
|
|
4105 1.38629 1.38629 1.38629 1.38629
|
|
4106 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
4107 20 0.14518 3.35575 2.78597 3.25510 20 - -
|
|
4108 1.38629 1.38629 1.38629 1.38629
|
|
4109 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
4110 21 2.93035 3.56282 0.11992 3.46492 21 - -
|
|
4111 1.38629 1.38629 1.38629 1.38629
|
|
4112 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
4113 22 0.14518 3.35575 2.78597 3.25510 22 - -
|
|
4114 1.38629 1.38629 1.38629 1.38629
|
|
4115 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
4116 23 2.93035 3.56282 0.11992 3.46492 23 - -
|
|
4117 1.38629 1.38629 1.38629 1.38629
|
|
4118 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
4119 24 3.06393 2.57943 3.11303 0.18271 24 - -
|
|
4120 1.38629 1.38629 1.38629 1.38629
|
|
4121 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
4122 25 0.14518 3.35575 2.78597 3.25510 25 - -
|
|
4123 1.38629 1.38629 1.38629 1.38629
|
|
4124 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
4125 26 3.06393 2.57943 3.11303 0.18271 26 - -
|
|
4126 1.38629 1.38629 1.38629 1.38629
|
|
4127 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
4128 27 2.93035 3.56282 0.11992 3.46492 27 - -
|
|
4129 1.38629 1.38629 1.38629 1.38629
|
|
4130 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
4131 28 3.40484 0.13363 3.45549 2.80837 28 - -
|
|
4132 1.38629 1.38629 1.38629 1.38629
|
|
4133 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
4134 29 3.40484 0.13363 3.45549 2.80837 29 - -
|
|
4135 1.38629 1.38629 1.38629 1.38629
|
|
4136 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
4137 30 3.06393 2.57943 3.11303 0.18271 30 - -
|
|
4138 1.38629 1.38629 1.38629 1.38629
|
|
4139 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
4140 31 2.93035 3.56282 0.11992 3.46492 31 - -
|
|
4141 1.38629 1.38629 1.38629 1.38629
|
|
4142 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
4143 32 3.40484 0.13363 3.45549 2.80837 32 - -
|
|
4144 1.38629 1.38629 1.38629 1.38629
|
|
4145 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
4146 33 3.40484 0.13363 3.45549 2.80837 33 - -
|
|
4147 1.38629 1.38629 1.38629 1.38629
|
|
4148 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
4149 34 3.06393 2.57943 3.11303 0.18271 34 - -
|
|
4150 1.38629 1.38629 1.38629 1.38629
|
|
4151 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
4152 35 2.93035 3.56282 0.11992 3.46492 35 - -
|
|
4153 1.38629 1.38629 1.38629 1.38629
|
|
4154 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
4155 36 0.14518 3.35575 2.78597 3.25510 36 - -
|
|
4156 1.38629 1.38629 1.38629 1.38629
|
|
4157 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
4158 37 2.93035 3.56282 0.11992 3.46492 37 - -
|
|
4159 1.38629 1.38629 1.38629 1.38629
|
|
4160 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
4161 38 3.40484 0.13363 3.45549 2.80837 38 - -
|
|
4162 1.38629 1.38629 1.38629 1.38629
|
|
4163 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
4164 39 2.93035 3.56282 0.11992 3.46492 39 - -
|
|
4165 1.38629 1.38629 1.38629 1.38629
|
|
4166 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
4167 40 3.06393 2.57943 3.11303 0.18271 40 - -
|
|
4168 1.38629 1.38629 1.38629 1.38629
|
|
4169 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
4170 41 3.40484 0.13363 3.45549 2.80837 41 - -
|
|
4171 1.38629 1.38629 1.38629 1.38629
|
|
4172 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
4173 42 0.14518 3.35575 2.78597 3.25510 42 - -
|
|
4174 1.38629 1.38629 1.38629 1.38629
|
|
4175 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
4176 43 2.93035 3.56282 0.11992 3.46492 43 - -
|
|
4177 1.38629 1.38629 1.38629 1.38629
|
|
4178 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
4179 44 3.06393 2.57943 3.11303 0.18271 44 - -
|
|
4180 1.38629 1.38629 1.38629 1.38629
|
|
4181 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
4182 45 2.93035 3.56282 0.11992 3.46492 45 - -
|
|
4183 1.38629 1.38629 1.38629 1.38629
|
|
4184 0.01888 3.97913 * 1.46634 0.26236 0.00000 *
|
|
4185 //
|
|
4186 HMMER3/b [3.0 | March 2010]
|
|
4187 NAME 3_End_Chlorophyta_58S_end_tenc_long
|
|
4188 LENG 45
|
|
4189 ALPH DNA
|
|
4190 RF no
|
|
4191 CS no
|
|
4192 MAP yes
|
|
4193 DATE Sat Jan 28 01:07:32 2012
|
|
4194 NSEQ 2
|
|
4195 EFFN 2.000000
|
|
4196 CKSUM 3208501958
|
|
4197 STATS LOCAL MSV -7.5772 0.72723
|
|
4198 STATS LOCAL VITERBI -8.1443 0.72723
|
|
4199 STATS LOCAL FORWARD -3.3746 0.72723
|
|
4200 HMM A C G T
|
|
4201 m->m m->i m->d i->m i->i d->m d->d
|
|
4202 COMPO 1.74235 1.29869 1.07600 1.55568
|
|
4203 1.38629 1.38629 1.38629 1.38629
|
|
4204 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
4205 1 2.53331 3.02441 0.20344 2.88069 1 - -
|
|
4206 1.38629 1.38629 1.38629 1.38629
|
|
4207 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4208 2 2.81865 0.23582 2.88868 2.35662 2 - -
|
|
4209 1.38629 1.38629 1.38629 1.38629
|
|
4210 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4211 3 2.53331 3.02441 0.20344 2.88069 3 - -
|
|
4212 1.38629 1.38629 1.38629 1.38629
|
|
4213 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4214 4 2.81865 0.23582 2.88868 2.35662 4 - -
|
|
4215 1.38629 1.38629 1.38629 1.38629
|
|
4216 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4217 5 2.57915 2.25909 2.64442 0.28946 5 - -
|
|
4218 1.38629 1.38629 1.38629 1.38629
|
|
4219 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4220 6 2.81865 0.23582 2.88868 2.35662 6 - -
|
|
4221 1.38629 1.38629 1.38629 1.38629
|
|
4222 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4223 7 2.53331 3.02441 0.20344 2.88069 7 - -
|
|
4224 1.38629 1.38629 1.38629 1.38629
|
|
4225 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4226 8 0.23862 2.84929 2.43386 2.70756 8 - -
|
|
4227 1.38629 1.38629 1.38629 1.38629
|
|
4228 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4229 9 2.53331 3.02441 0.20344 2.88069 9 - -
|
|
4230 1.38629 1.38629 1.38629 1.38629
|
|
4231 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4232 10 2.53331 3.02441 0.20344 2.88069 10 - -
|
|
4233 1.38629 1.38629 1.38629 1.38629
|
|
4234 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4235 11 2.81865 0.23582 2.88868 2.35662 11 - -
|
|
4236 1.38629 1.38629 1.38629 1.38629
|
|
4237 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4238 12 2.57915 2.25909 2.64442 0.28946 12 - -
|
|
4239 1.38629 1.38629 1.38629 1.38629
|
|
4240 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4241 13 2.57915 2.25909 2.64442 0.28946 13 - -
|
|
4242 1.38629 1.38629 1.38629 1.38629
|
|
4243 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4244 14 2.81865 0.23582 2.88868 2.35662 14 - -
|
|
4245 1.38629 1.38629 1.38629 1.38629
|
|
4246 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4247 15 2.53331 3.02441 0.20344 2.88069 15 - -
|
|
4248 1.38629 1.38629 1.38629 1.38629
|
|
4249 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4250 16 2.53331 3.02441 0.20344 2.88069 16 - -
|
|
4251 1.38629 1.38629 1.38629 1.38629
|
|
4252 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4253 17 2.81865 0.23582 2.88868 2.35662 17 - -
|
|
4254 1.38629 1.38629 1.38629 1.38629
|
|
4255 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4256 18 2.81865 0.23582 2.88868 2.35662 18 - -
|
|
4257 1.38629 1.38629 1.38629 1.38629
|
|
4258 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4259 19 2.53331 3.02441 0.20344 2.88069 19 - -
|
|
4260 1.38629 1.38629 1.38629 1.38629
|
|
4261 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4262 20 0.23862 2.84929 2.43386 2.70756 20 - -
|
|
4263 1.38629 1.38629 1.38629 1.38629
|
|
4264 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4265 21 2.53331 3.02441 0.20344 2.88069 21 - -
|
|
4266 1.38629 1.38629 1.38629 1.38629
|
|
4267 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4268 22 0.23862 2.84929 2.43386 2.70756 22 - -
|
|
4269 1.38629 1.38629 1.38629 1.38629
|
|
4270 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4271 23 2.53331 3.02441 0.20344 2.88069 23 - -
|
|
4272 1.38629 1.38629 1.38629 1.38629
|
|
4273 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4274 24 2.81865 0.23582 2.88868 2.35662 24 - -
|
|
4275 1.38629 1.38629 1.38629 1.38629
|
|
4276 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4277 25 0.23862 2.84929 2.43386 2.70756 25 - -
|
|
4278 1.38629 1.38629 1.38629 1.38629
|
|
4279 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4280 26 2.57915 2.25909 2.64442 0.28946 26 - -
|
|
4281 1.38629 1.38629 1.38629 1.38629
|
|
4282 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4283 27 2.53331 3.02441 0.20344 2.88069 27 - -
|
|
4284 1.38629 1.38629 1.38629 1.38629
|
|
4285 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4286 28 2.57915 2.25909 2.64442 0.28946 28 - -
|
|
4287 1.38629 1.38629 1.38629 1.38629
|
|
4288 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4289 29 2.81865 0.23582 2.88868 2.35662 29 - -
|
|
4290 1.38629 1.38629 1.38629 1.38629
|
|
4291 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4292 30 2.57915 2.25909 2.64442 0.28946 30 - -
|
|
4293 1.38629 1.38629 1.38629 1.38629
|
|
4294 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4295 31 2.53331 3.02441 0.20344 2.88069 31 - -
|
|
4296 1.38629 1.38629 1.38629 1.38629
|
|
4297 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4298 32 2.81865 0.23582 2.88868 2.35662 32 - -
|
|
4299 1.38629 1.38629 1.38629 1.38629
|
|
4300 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4301 33 2.81865 0.23582 2.88868 2.35662 33 - -
|
|
4302 1.38629 1.38629 1.38629 1.38629
|
|
4303 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4304 34 2.57915 2.25909 2.64442 0.28946 34 - -
|
|
4305 1.38629 1.38629 1.38629 1.38629
|
|
4306 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4307 35 2.53331 3.02441 0.20344 2.88069 35 - -
|
|
4308 1.38629 1.38629 1.38629 1.38629
|
|
4309 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4310 36 0.23862 2.84929 2.43386 2.70756 36 - -
|
|
4311 1.38629 1.38629 1.38629 1.38629
|
|
4312 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4313 37 2.53331 3.02441 0.20344 2.88069 37 - -
|
|
4314 1.38629 1.38629 1.38629 1.38629
|
|
4315 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4316 38 2.57915 2.25909 2.64442 0.28946 38 - -
|
|
4317 1.38629 1.38629 1.38629 1.38629
|
|
4318 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4319 39 2.53331 3.02441 0.20344 2.88069 39 - -
|
|
4320 1.38629 1.38629 1.38629 1.38629
|
|
4321 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4322 40 2.57915 2.25909 2.64442 0.28946 40 - -
|
|
4323 1.38629 1.38629 1.38629 1.38629
|
|
4324 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4325 41 2.81865 0.23582 2.88868 2.35662 41 - -
|
|
4326 1.38629 1.38629 1.38629 1.38629
|
|
4327 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4328 42 0.23862 2.84929 2.43386 2.70756 42 - -
|
|
4329 1.38629 1.38629 1.38629 1.38629
|
|
4330 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4331 43 2.53331 3.02441 0.20344 2.88069 43 - -
|
|
4332 1.38629 1.38629 1.38629 1.38629
|
|
4333 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4334 44 2.81865 0.23582 2.88868 2.35662 44 - -
|
|
4335 1.38629 1.38629 1.38629 1.38629
|
|
4336 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4337 45 2.53331 3.02441 0.20344 2.88069 45 - -
|
|
4338 1.38629 1.38629 1.38629 1.38629
|
|
4339 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
4340 //
|
|
4341 HMMER3/b [3.0 | March 2010]
|
|
4342 NAME 3_End_Chlorophyta_58S_end_thirteen_long
|
|
4343 LENG 45
|
|
4344 ALPH DNA
|
|
4345 RF no
|
|
4346 CS no
|
|
4347 MAP yes
|
|
4348 DATE Sat Jan 28 01:08:41 2012
|
|
4349 NSEQ 2
|
|
4350 EFFN 2.000000
|
|
4351 CKSUM 1843024009
|
|
4352 STATS LOCAL MSV -7.3966 0.72771
|
|
4353 STATS LOCAL VITERBI -8.2127 0.72771
|
|
4354 STATS LOCAL FORWARD -3.4704 0.72771
|
|
4355 HMM A C G T
|
|
4356 m->m m->i m->d i->m i->i d->m d->d
|
|
4357 COMPO 1.82835 1.28871 1.17034 1.37265
|
|
4358 1.38629 1.38629 1.38629 1.38629
|
|
4359 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
4360 1 2.57915 2.25909 2.64442 0.28946 1 - -
|
|
4361 1.38629 1.38629 1.38629 1.38629
|
|
4362 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4363 2 2.57915 2.25909 2.64442 0.28946 2 - -
|
|
4364 1.38629 1.38629 1.38629 1.38629
|
|
4365 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4366 3 2.53331 3.02441 0.20344 2.88069 3 - -
|
|
4367 1.38629 1.38629 1.38629 1.38629
|
|
4368 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4369 4 2.81865 0.23582 2.88868 2.35662 4 - -
|
|
4370 1.38629 1.38629 1.38629 1.38629
|
|
4371 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4372 5 2.53331 3.02441 0.20344 2.88069 5 - -
|
|
4373 1.38629 1.38629 1.38629 1.38629
|
|
4374 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4375 6 2.53331 3.02441 0.20344 2.88069 6 - -
|
|
4376 1.38629 1.38629 1.38629 1.38629
|
|
4377 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4378 7 2.57915 2.25909 2.64442 0.28946 7 - -
|
|
4379 1.38629 1.38629 1.38629 1.38629
|
|
4380 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4381 8 2.53331 3.02441 0.20344 2.88069 8 - -
|
|
4382 1.38629 1.38629 1.38629 1.38629
|
|
4383 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4384 9 2.53331 3.02441 0.20344 2.88069 9 - -
|
|
4385 1.38629 1.38629 1.38629 1.38629
|
|
4386 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4387 10 2.57915 2.25909 2.64442 0.28946 10 - -
|
|
4388 1.38629 1.38629 1.38629 1.38629
|
|
4389 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4390 11 2.53331 3.02441 0.20344 2.88069 11 - -
|
|
4391 1.38629 1.38629 1.38629 1.38629
|
|
4392 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4393 12 2.81865 0.23582 2.88868 2.35662 12 - -
|
|
4394 1.38629 1.38629 1.38629 1.38629
|
|
4395 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4396 13 2.81865 0.23582 2.88868 2.35662 13 - -
|
|
4397 1.38629 1.38629 1.38629 1.38629
|
|
4398 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4399 14 2.57915 2.25909 2.64442 0.28946 14 - -
|
|
4400 1.38629 1.38629 1.38629 1.38629
|
|
4401 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4402 15 2.81865 0.23582 2.88868 2.35662 15 - -
|
|
4403 1.38629 1.38629 1.38629 1.38629
|
|
4404 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4405 16 2.53331 3.02441 0.20344 2.88069 16 - -
|
|
4406 1.38629 1.38629 1.38629 1.38629
|
|
4407 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4408 17 2.53331 3.02441 0.20344 2.88069 17 - -
|
|
4409 1.38629 1.38629 1.38629 1.38629
|
|
4410 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4411 18 2.57915 2.25909 2.64442 0.28946 18 - -
|
|
4412 1.38629 1.38629 1.38629 1.38629
|
|
4413 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4414 19 0.23862 2.84929 2.43386 2.70756 19 - -
|
|
4415 1.38629 1.38629 1.38629 1.38629
|
|
4416 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4417 20 2.57915 2.25909 2.64442 0.28946 20 - -
|
|
4418 1.38629 1.38629 1.38629 1.38629
|
|
4419 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4420 21 2.81865 0.23582 2.88868 2.35662 21 - -
|
|
4421 1.38629 1.38629 1.38629 1.38629
|
|
4422 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4423 22 0.23862 2.84929 2.43386 2.70756 22 - -
|
|
4424 1.38629 1.38629 1.38629 1.38629
|
|
4425 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4426 23 2.81865 0.23582 2.88868 2.35662 23 - -
|
|
4427 1.38629 1.38629 1.38629 1.38629
|
|
4428 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4429 24 2.81865 0.23582 2.88868 2.35662 24 - -
|
|
4430 1.38629 1.38629 1.38629 1.38629
|
|
4431 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4432 25 0.23862 2.84929 2.43386 2.70756 25 - -
|
|
4433 1.38629 1.38629 1.38629 1.38629
|
|
4434 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4435 26 2.57915 2.25909 2.64442 0.28946 26 - -
|
|
4436 1.38629 1.38629 1.38629 1.38629
|
|
4437 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4438 27 2.53331 3.02441 0.20344 2.88069 27 - -
|
|
4439 1.38629 1.38629 1.38629 1.38629
|
|
4440 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4441 28 2.57915 2.25909 2.64442 0.28946 28 - -
|
|
4442 1.38629 1.38629 1.38629 1.38629
|
|
4443 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4444 29 2.81865 0.23582 2.88868 2.35662 29 - -
|
|
4445 1.38629 1.38629 1.38629 1.38629
|
|
4446 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4447 30 2.57915 2.25909 2.64442 0.28946 30 - -
|
|
4448 1.38629 1.38629 1.38629 1.38629
|
|
4449 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4450 31 2.53331 3.02441 0.20344 2.88069 31 - -
|
|
4451 1.38629 1.38629 1.38629 1.38629
|
|
4452 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4453 32 2.81865 0.23582 2.88868 2.35662 32 - -
|
|
4454 1.38629 1.38629 1.38629 1.38629
|
|
4455 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4456 33 2.81865 0.23582 2.88868 2.35662 33 - -
|
|
4457 1.38629 1.38629 1.38629 1.38629
|
|
4458 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4459 34 2.57915 2.25909 2.64442 0.28946 34 - -
|
|
4460 1.38629 1.38629 1.38629 1.38629
|
|
4461 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4462 35 2.81865 0.23582 2.88868 2.35662 35 - -
|
|
4463 1.38629 1.38629 1.38629 1.38629
|
|
4464 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4465 36 0.23862 2.84929 2.43386 2.70756 36 - -
|
|
4466 1.38629 1.38629 1.38629 1.38629
|
|
4467 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4468 37 2.53331 3.02441 0.20344 2.88069 37 - -
|
|
4469 1.38629 1.38629 1.38629 1.38629
|
|
4470 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4471 38 2.81865 0.23582 2.88868 2.35662 38 - -
|
|
4472 1.38629 1.38629 1.38629 1.38629
|
|
4473 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4474 39 2.53331 3.02441 0.20344 2.88069 39 - -
|
|
4475 1.38629 1.38629 1.38629 1.38629
|
|
4476 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4477 40 2.57915 2.25909 2.64442 0.28946 40 - -
|
|
4478 1.38629 1.38629 1.38629 1.38629
|
|
4479 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4480 41 2.81865 0.23582 2.88868 2.35662 41 - -
|
|
4481 1.38629 1.38629 1.38629 1.38629
|
|
4482 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4483 42 2.53331 3.02441 0.20344 2.88069 42 - -
|
|
4484 1.38629 1.38629 1.38629 1.38629
|
|
4485 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4486 43 2.53331 3.02441 0.20344 2.88069 43 - -
|
|
4487 1.38629 1.38629 1.38629 1.38629
|
|
4488 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4489 44 0.23862 2.84929 2.43386 2.70756 44 - -
|
|
4490 1.38629 1.38629 1.38629 1.38629
|
|
4491 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4492 45 2.53331 3.02441 0.20344 2.88069 45 - -
|
|
4493 1.38629 1.38629 1.38629 1.38629
|
|
4494 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
4495 //
|
|
4496 HMMER3/b [3.0 | March 2010]
|
|
4497 NAME 3_End_Chlorophyta_58S_end_three_long
|
|
4498 LENG 45
|
|
4499 ALPH DNA
|
|
4500 RF no
|
|
4501 CS no
|
|
4502 MAP yes
|
|
4503 DATE Sat Jan 28 01:05:03 2012
|
|
4504 NSEQ 36
|
|
4505 EFFN 3.177246
|
|
4506 CKSUM 3671677378
|
|
4507 STATS LOCAL MSV -8.0233 0.71932
|
|
4508 STATS LOCAL VITERBI -7.5418 0.71932
|
|
4509 STATS LOCAL FORWARD -3.8393 0.71932
|
|
4510 HMM A C G T
|
|
4511 m->m m->i m->d i->m i->i d->m d->d
|
|
4512 COMPO 1.73557 1.15352 1.14079 1.66808
|
|
4513 1.38629 1.38629 1.38629 1.38629
|
|
4514 0.03790 3.98476 3.98476 1.46634 0.26236 0.00000 *
|
|
4515 1 2.91395 3.53912 0.12262 3.43880 1 - -
|
|
4516 1.38629 1.38629 1.38629 1.38629
|
|
4517 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
|
|
4518 2 3.37805 0.13697 3.42981 2.78874 2 - -
|
|
4519 1.38629 1.38629 1.38629 1.38629
|
|
4520 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
|
|
4521 3 2.91395 3.53912 0.12262 3.43880 3 - -
|
|
4522 1.38629 1.38629 1.38629 1.38629
|
|
4523 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
|
|
4524 4 3.37805 0.13697 3.42981 2.78874 4 - -
|
|
4525 1.38629 1.38629 1.38629 1.38629
|
|
4526 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
|
|
4527 5 3.04070 2.56462 3.09068 0.18660 5 - -
|
|
4528 1.38629 1.38629 1.38629 1.38629
|
|
4529 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
|
|
4530 6 3.37805 0.13697 3.42981 2.78874 6 - -
|
|
4531 1.38629 1.38629 1.38629 1.38629
|
|
4532 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
|
|
4533 7 2.91395 3.53912 0.12262 3.43880 7 - -
|
|
4534 1.38629 1.38629 1.38629 1.38629
|
|
4535 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
|
|
4536 8 0.14836 3.33255 2.77082 3.22974 8 - -
|
|
4537 1.38629 1.38629 1.38629 1.38629
|
|
4538 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
|
|
4539 9 2.91395 3.53912 0.12262 3.43880 9 - -
|
|
4540 1.38629 1.38629 1.38629 1.38629
|
|
4541 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
|
|
4542 10 2.91395 3.53912 0.12262 3.43880 10 - -
|
|
4543 1.38629 1.38629 1.38629 1.38629
|
|
4544 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
|
|
4545 11 3.37805 0.13697 3.42981 2.78874 11 - -
|
|
4546 1.38629 1.38629 1.38629 1.38629
|
|
4547 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
|
|
4548 12 3.04070 2.56462 3.09068 0.18660 12 - -
|
|
4549 1.38629 1.38629 1.38629 1.38629
|
|
4550 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
|
|
4551 13 2.83286 2.10204 2.89003 0.27001 13 - -
|
|
4552 1.38629 1.38629 1.38629 1.38629
|
|
4553 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
|
|
4554 14 3.37805 0.13697 3.42981 2.78874 14 - -
|
|
4555 1.38629 1.38629 1.38629 1.38629
|
|
4556 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
|
|
4557 15 2.91395 3.53912 0.12262 3.43880 15 - -
|
|
4558 1.38629 1.38629 1.38629 1.38629
|
|
4559 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
|
|
4560 16 2.91395 3.53912 0.12262 3.43880 16 - -
|
|
4561 1.38629 1.38629 1.38629 1.38629
|
|
4562 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
|
|
4563 17 3.37805 0.13697 3.42981 2.78874 17 - -
|
|
4564 1.38629 1.38629 1.38629 1.38629
|
|
4565 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
|
|
4566 18 3.37805 0.13697 3.42981 2.78874 18 - -
|
|
4567 1.38629 1.38629 1.38629 1.38629
|
|
4568 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
|
|
4569 19 0.24927 3.01762 2.14913 2.89812 19 - -
|
|
4570 1.38629 1.38629 1.38629 1.38629
|
|
4571 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
|
|
4572 20 0.14836 3.33255 2.77082 3.22974 20 - -
|
|
4573 1.38629 1.38629 1.38629 1.38629
|
|
4574 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
|
|
4575 21 2.91395 3.53912 0.12262 3.43880 21 - -
|
|
4576 1.38629 1.38629 1.38629 1.38629
|
|
4577 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
|
|
4578 22 0.14836 3.33255 2.77082 3.22974 22 - -
|
|
4579 1.38629 1.38629 1.38629 1.38629
|
|
4580 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
|
|
4581 23 2.91395 3.53912 0.12262 3.43880 23 - -
|
|
4582 1.38629 1.38629 1.38629 1.38629
|
|
4583 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
|
|
4584 24 3.37805 0.13697 3.42981 2.78874 24 - -
|
|
4585 1.38629 1.38629 1.38629 1.38629
|
|
4586 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
|
|
4587 25 0.14836 3.33255 2.77082 3.22974 25 - -
|
|
4588 1.38629 1.38629 1.38629 1.38629
|
|
4589 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
|
|
4590 26 3.04070 2.56462 3.09068 0.18660 26 - -
|
|
4591 1.38629 1.38629 1.38629 1.38629
|
|
4592 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
|
|
4593 27 2.91395 3.53912 0.12262 3.43880 27 - -
|
|
4594 1.38629 1.38629 1.38629 1.38629
|
|
4595 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
|
|
4596 28 3.04070 2.56462 3.09068 0.18660 28 - -
|
|
4597 1.38629 1.38629 1.38629 1.38629
|
|
4598 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
|
|
4599 29 3.37805 0.13697 3.42981 2.78874 29 - -
|
|
4600 1.38629 1.38629 1.38629 1.38629
|
|
4601 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
|
|
4602 30 3.04070 2.56462 3.09068 0.18660 30 - -
|
|
4603 1.38629 1.38629 1.38629 1.38629
|
|
4604 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
|
|
4605 31 2.91395 3.53912 0.12262 3.43880 31 - -
|
|
4606 1.38629 1.38629 1.38629 1.38629
|
|
4607 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
|
|
4608 32 3.37805 0.13697 3.42981 2.78874 32 - -
|
|
4609 1.38629 1.38629 1.38629 1.38629
|
|
4610 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
|
|
4611 33 3.37805 0.13697 3.42981 2.78874 33 - -
|
|
4612 1.38629 1.38629 1.38629 1.38629
|
|
4613 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
|
|
4614 34 3.04070 2.56462 3.09068 0.18660 34 - -
|
|
4615 1.38629 1.38629 1.38629 1.38629
|
|
4616 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
|
|
4617 35 3.37805 0.13697 3.42981 2.78874 35 - -
|
|
4618 1.38629 1.38629 1.38629 1.38629
|
|
4619 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
|
|
4620 36 0.14836 3.33255 2.77082 3.22974 36 - -
|
|
4621 1.38629 1.38629 1.38629 1.38629
|
|
4622 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
|
|
4623 37 2.91395 3.53912 0.12262 3.43880 37 - -
|
|
4624 1.38629 1.38629 1.38629 1.38629
|
|
4625 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
|
|
4626 38 3.37805 0.13697 3.42981 2.78874 38 - -
|
|
4627 1.38629 1.38629 1.38629 1.38629
|
|
4628 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
|
|
4629 39 2.91395 3.53912 0.12262 3.43880 39 - -
|
|
4630 1.38629 1.38629 1.38629 1.38629
|
|
4631 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
|
|
4632 40 3.04070 2.56462 3.09068 0.18660 40 - -
|
|
4633 1.38629 1.38629 1.38629 1.38629
|
|
4634 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
|
|
4635 41 3.37805 0.13697 3.42981 2.78874 41 - -
|
|
4636 1.38629 1.38629 1.38629 1.38629
|
|
4637 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
|
|
4638 42 2.91395 3.53912 0.12262 3.43880 42 - -
|
|
4639 1.38629 1.38629 1.38629 1.38629
|
|
4640 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
|
|
4641 43 2.91395 3.53912 0.12262 3.43880 43 - -
|
|
4642 1.38629 1.38629 1.38629 1.38629
|
|
4643 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
|
|
4644 44 3.37805 0.13697 3.42981 2.78874 44 - -
|
|
4645 1.38629 1.38629 1.38629 1.38629
|
|
4646 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
|
|
4647 45 0.14836 3.33255 2.77082 3.22974 45 - -
|
|
4648 1.38629 1.38629 1.38629 1.38629
|
|
4649 0.01913 3.96599 * 1.46634 0.26236 0.00000 *
|
|
4650 //
|
|
4651 HMMER3/b [3.0 | March 2010]
|
|
4652 NAME 3_End_Chlorophyta_58S_end_twelve_long
|
|
4653 LENG 45
|
|
4654 ALPH DNA
|
|
4655 RF no
|
|
4656 CS no
|
|
4657 MAP yes
|
|
4658 DATE Sat Jan 28 01:08:30 2012
|
|
4659 NSEQ 4
|
|
4660 EFFN 3.300781
|
|
4661 CKSUM 2752840731
|
|
4662 STATS LOCAL MSV -8.1722 0.71931
|
|
4663 STATS LOCAL VITERBI -7.4014 0.71931
|
|
4664 STATS LOCAL FORWARD -3.9277 0.71931
|
|
4665 HMM A C G T
|
|
4666 m->m m->i m->d i->m i->i d->m d->d
|
|
4667 COMPO 1.77926 1.32153 1.11938 1.43537
|
|
4668 1.38629 1.38629 1.38629 1.38629
|
|
4669 0.03704 4.00748 4.00748 1.46634 0.26236 0.00000 *
|
|
4670 1 2.94261 3.58061 0.11794 3.48454 1 - -
|
|
4671 1.38629 1.38629 1.38629 1.38629
|
|
4672 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
|
|
4673 2 3.42500 0.13118 3.47480 2.82309 2 - -
|
|
4674 1.38629 1.38629 1.38629 1.38629
|
|
4675 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
|
|
4676 3 2.94261 3.58061 0.11794 3.48454 3 - -
|
|
4677 1.38629 1.38629 1.38629 1.38629
|
|
4678 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
|
|
4679 4 3.42500 0.13118 3.47480 2.82309 4 - -
|
|
4680 1.38629 1.38629 1.38629 1.38629
|
|
4681 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
|
|
4682 5 3.42500 0.13118 3.47480 2.82309 5 - -
|
|
4683 1.38629 1.38629 1.38629 1.38629
|
|
4684 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
|
|
4685 6 3.08151 2.59063 3.12994 0.17982 6 - -
|
|
4686 1.38629 1.38629 1.38629 1.38629
|
|
4687 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
|
|
4688 7 2.94261 3.58061 0.11794 3.48454 7 - -
|
|
4689 1.38629 1.38629 1.38629 1.38629
|
|
4690 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
|
|
4691 8 0.14283 3.37323 2.79735 3.27422 8 - -
|
|
4692 1.38629 1.38629 1.38629 1.38629
|
|
4693 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
|
|
4694 9 2.94261 3.58061 0.11794 3.48454 9 - -
|
|
4695 1.38629 1.38629 1.38629 1.38629
|
|
4696 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
|
|
4697 10 2.94261 3.58061 0.11794 3.48454 10 - -
|
|
4698 1.38629 1.38629 1.38629 1.38629
|
|
4699 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
|
|
4700 11 3.08151 2.59063 3.12994 0.17982 11 - -
|
|
4701 1.38629 1.38629 1.38629 1.38629
|
|
4702 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
|
|
4703 12 3.42500 0.13118 3.47480 2.82309 12 - -
|
|
4704 1.38629 1.38629 1.38629 1.38629
|
|
4705 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
|
|
4706 13 3.08151 2.59063 3.12994 0.17982 13 - -
|
|
4707 1.38629 1.38629 1.38629 1.38629
|
|
4708 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
|
|
4709 14 0.14283 3.37323 2.79735 3.27422 14 - -
|
|
4710 1.38629 1.38629 1.38629 1.38629
|
|
4711 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
|
|
4712 15 2.94261 3.58061 0.11794 3.48454 15 - -
|
|
4713 1.38629 1.38629 1.38629 1.38629
|
|
4714 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
|
|
4715 16 2.94261 3.58061 0.11794 3.48454 16 - -
|
|
4716 1.38629 1.38629 1.38629 1.38629
|
|
4717 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
|
|
4718 17 3.42500 0.13118 3.47480 2.82309 17 - -
|
|
4719 1.38629 1.38629 1.38629 1.38629
|
|
4720 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
|
|
4721 18 3.42500 0.13118 3.47480 2.82309 18 - -
|
|
4722 1.38629 1.38629 1.38629 1.38629
|
|
4723 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
|
|
4724 19 0.86244 2.51162 0.90909 2.36616 19 - -
|
|
4725 1.38629 1.38629 1.38629 1.38629
|
|
4726 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
|
|
4727 20 0.14283 3.37323 2.79735 3.27422 20 - -
|
|
4728 1.38629 1.38629 1.38629 1.38629
|
|
4729 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
|
|
4730 21 0.14283 3.37323 2.79735 3.27422 21 - -
|
|
4731 1.38629 1.38629 1.38629 1.38629
|
|
4732 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
|
|
4733 22 2.94261 3.58061 0.11794 3.48454 22 - -
|
|
4734 1.38629 1.38629 1.38629 1.38629
|
|
4735 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
|
|
4736 23 2.94261 3.58061 0.11794 3.48454 23 - -
|
|
4737 1.38629 1.38629 1.38629 1.38629
|
|
4738 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
|
|
4739 24 3.42500 0.13118 3.47480 2.82309 24 - -
|
|
4740 1.38629 1.38629 1.38629 1.38629
|
|
4741 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
|
|
4742 25 0.14283 3.37323 2.79735 3.27422 25 - -
|
|
4743 1.38629 1.38629 1.38629 1.38629
|
|
4744 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
|
|
4745 26 3.08151 2.59063 3.12994 0.17982 26 - -
|
|
4746 1.38629 1.38629 1.38629 1.38629
|
|
4747 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
|
|
4748 27 2.94261 3.58061 0.11794 3.48454 27 - -
|
|
4749 1.38629 1.38629 1.38629 1.38629
|
|
4750 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
|
|
4751 28 3.08151 2.59063 3.12994 0.17982 28 - -
|
|
4752 1.38629 1.38629 1.38629 1.38629
|
|
4753 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
|
|
4754 29 3.42500 0.13118 3.47480 2.82309 29 - -
|
|
4755 1.38629 1.38629 1.38629 1.38629
|
|
4756 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
|
|
4757 30 3.08151 2.59063 3.12994 0.17982 30 - -
|
|
4758 1.38629 1.38629 1.38629 1.38629
|
|
4759 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
|
|
4760 31 2.94261 3.58061 0.11794 3.48454 31 - -
|
|
4761 1.38629 1.38629 1.38629 1.38629
|
|
4762 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
|
|
4763 32 2.94261 3.58061 0.11794 3.48454 32 - -
|
|
4764 1.38629 1.38629 1.38629 1.38629
|
|
4765 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
|
|
4766 33 3.42500 0.13118 3.47480 2.82309 33 - -
|
|
4767 1.38629 1.38629 1.38629 1.38629
|
|
4768 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
|
|
4769 34 3.08151 2.59063 3.12994 0.17982 34 - -
|
|
4770 1.38629 1.38629 1.38629 1.38629
|
|
4771 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
|
|
4772 35 3.42500 0.13118 3.47480 2.82309 35 - -
|
|
4773 1.38629 1.38629 1.38629 1.38629
|
|
4774 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
|
|
4775 36 0.14283 3.37323 2.79735 3.27422 36 - -
|
|
4776 1.38629 1.38629 1.38629 1.38629
|
|
4777 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
|
|
4778 37 2.94261 3.58061 0.11794 3.48454 37 - -
|
|
4779 1.38629 1.38629 1.38629 1.38629
|
|
4780 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
|
|
4781 38 3.42500 0.13118 3.47480 2.82309 38 - -
|
|
4782 1.38629 1.38629 1.38629 1.38629
|
|
4783 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
|
|
4784 39 2.94261 3.58061 0.11794 3.48454 39 - -
|
|
4785 1.38629 1.38629 1.38629 1.38629
|
|
4786 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
|
|
4787 40 3.08151 2.59063 3.12994 0.17982 40 - -
|
|
4788 1.38629 1.38629 1.38629 1.38629
|
|
4789 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
|
|
4790 41 3.42500 0.13118 3.47480 2.82309 41 - -
|
|
4791 1.38629 1.38629 1.38629 1.38629
|
|
4792 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
|
|
4793 42 2.94261 3.58061 0.11794 3.48454 42 - -
|
|
4794 1.38629 1.38629 1.38629 1.38629
|
|
4795 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
|
|
4796 43 3.08151 2.59063 3.12994 0.17982 43 - -
|
|
4797 1.38629 1.38629 1.38629 1.38629
|
|
4798 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
|
|
4799 44 3.08151 2.59063 3.12994 0.17982 44 - -
|
|
4800 1.38629 1.38629 1.38629 1.38629
|
|
4801 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
|
|
4802 45 3.08151 2.59063 3.12994 0.17982 45 - -
|
|
4803 1.38629 1.38629 1.38629 1.38629
|
|
4804 0.01869 3.98913 * 1.46634 0.26236 0.00000 *
|
|
4805 //
|
|
4806 HMMER3/b [3.0 | March 2010]
|
|
4807 NAME 3_End_Chlorophyta_58S_end_twoa_long
|
|
4808 LENG 45
|
|
4809 ALPH DNA
|
|
4810 RF no
|
|
4811 CS no
|
|
4812 MAP yes
|
|
4813 DATE Sat Jan 28 01:04:32 2012
|
|
4814 NSEQ 2
|
|
4815 EFFN 2.000000
|
|
4816 CKSUM 2739376932
|
|
4817 STATS LOCAL MSV -7.4352 0.72757
|
|
4818 STATS LOCAL VITERBI -8.2244 0.72757
|
|
4819 STATS LOCAL FORWARD -3.3792 0.72757
|
|
4820 HMM A C G T
|
|
4821 m->m m->i m->d i->m i->i d->m d->d
|
|
4822 COMPO 1.66657 1.24078 1.21694 1.48806
|
|
4823 1.38629 1.38629 1.38629 1.38629
|
|
4824 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
4825 1 2.53331 3.02441 0.20344 2.88069 1 - -
|
|
4826 1.38629 1.38629 1.38629 1.38629
|
|
4827 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4828 2 2.81865 0.23582 2.88868 2.35662 2 - -
|
|
4829 1.38629 1.38629 1.38629 1.38629
|
|
4830 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4831 3 2.53331 3.02441 0.20344 2.88069 3 - -
|
|
4832 1.38629 1.38629 1.38629 1.38629
|
|
4833 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4834 4 2.81865 0.23582 2.88868 2.35662 4 - -
|
|
4835 1.38629 1.38629 1.38629 1.38629
|
|
4836 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4837 5 2.81865 0.23582 2.88868 2.35662 5 - -
|
|
4838 1.38629 1.38629 1.38629 1.38629
|
|
4839 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4840 6 2.81865 0.23582 2.88868 2.35662 6 - -
|
|
4841 1.38629 1.38629 1.38629 1.38629
|
|
4842 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4843 7 0.23862 2.84929 2.43386 2.70756 7 - -
|
|
4844 1.38629 1.38629 1.38629 1.38629
|
|
4845 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4846 8 0.23862 2.84929 2.43386 2.70756 8 - -
|
|
4847 1.38629 1.38629 1.38629 1.38629
|
|
4848 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4849 9 2.53331 3.02441 0.20344 2.88069 9 - -
|
|
4850 1.38629 1.38629 1.38629 1.38629
|
|
4851 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4852 10 0.23862 2.84929 2.43386 2.70756 10 - -
|
|
4853 1.38629 1.38629 1.38629 1.38629
|
|
4854 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4855 11 2.81865 0.23582 2.88868 2.35662 11 - -
|
|
4856 1.38629 1.38629 1.38629 1.38629
|
|
4857 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4858 12 2.57915 2.25909 2.64442 0.28946 12 - -
|
|
4859 1.38629 1.38629 1.38629 1.38629
|
|
4860 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4861 13 2.57915 2.25909 2.64442 0.28946 13 - -
|
|
4862 1.38629 1.38629 1.38629 1.38629
|
|
4863 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4864 14 2.81865 0.23582 2.88868 2.35662 14 - -
|
|
4865 1.38629 1.38629 1.38629 1.38629
|
|
4866 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4867 15 2.53331 3.02441 0.20344 2.88069 15 - -
|
|
4868 1.38629 1.38629 1.38629 1.38629
|
|
4869 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4870 16 2.53331 3.02441 0.20344 2.88069 16 - -
|
|
4871 1.38629 1.38629 1.38629 1.38629
|
|
4872 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4873 17 2.57915 2.25909 2.64442 0.28946 17 - -
|
|
4874 1.38629 1.38629 1.38629 1.38629
|
|
4875 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4876 18 2.81865 0.23582 2.88868 2.35662 18 - -
|
|
4877 1.38629 1.38629 1.38629 1.38629
|
|
4878 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4879 19 0.23862 2.84929 2.43386 2.70756 19 - -
|
|
4880 1.38629 1.38629 1.38629 1.38629
|
|
4881 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4882 20 0.23862 2.84929 2.43386 2.70756 20 - -
|
|
4883 1.38629 1.38629 1.38629 1.38629
|
|
4884 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4885 21 2.53331 3.02441 0.20344 2.88069 21 - -
|
|
4886 1.38629 1.38629 1.38629 1.38629
|
|
4887 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4888 22 2.53331 3.02441 0.20344 2.88069 22 - -
|
|
4889 1.38629 1.38629 1.38629 1.38629
|
|
4890 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4891 23 2.53331 3.02441 0.20344 2.88069 23 - -
|
|
4892 1.38629 1.38629 1.38629 1.38629
|
|
4893 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4894 24 2.81865 0.23582 2.88868 2.35662 24 - -
|
|
4895 1.38629 1.38629 1.38629 1.38629
|
|
4896 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4897 25 0.23862 2.84929 2.43386 2.70756 25 - -
|
|
4898 1.38629 1.38629 1.38629 1.38629
|
|
4899 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4900 26 2.57915 2.25909 2.64442 0.28946 26 - -
|
|
4901 1.38629 1.38629 1.38629 1.38629
|
|
4902 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4903 27 2.53331 3.02441 0.20344 2.88069 27 - -
|
|
4904 1.38629 1.38629 1.38629 1.38629
|
|
4905 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4906 28 2.57915 2.25909 2.64442 0.28946 28 - -
|
|
4907 1.38629 1.38629 1.38629 1.38629
|
|
4908 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4909 29 2.81865 0.23582 2.88868 2.35662 29 - -
|
|
4910 1.38629 1.38629 1.38629 1.38629
|
|
4911 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4912 30 2.57915 2.25909 2.64442 0.28946 30 - -
|
|
4913 1.38629 1.38629 1.38629 1.38629
|
|
4914 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4915 31 2.53331 3.02441 0.20344 2.88069 31 - -
|
|
4916 1.38629 1.38629 1.38629 1.38629
|
|
4917 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4918 32 2.81865 0.23582 2.88868 2.35662 32 - -
|
|
4919 1.38629 1.38629 1.38629 1.38629
|
|
4920 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4921 33 2.81865 0.23582 2.88868 2.35662 33 - -
|
|
4922 1.38629 1.38629 1.38629 1.38629
|
|
4923 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4924 34 2.57915 2.25909 2.64442 0.28946 34 - -
|
|
4925 1.38629 1.38629 1.38629 1.38629
|
|
4926 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4927 35 2.81865 0.23582 2.88868 2.35662 35 - -
|
|
4928 1.38629 1.38629 1.38629 1.38629
|
|
4929 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4930 36 0.23862 2.84929 2.43386 2.70756 36 - -
|
|
4931 1.38629 1.38629 1.38629 1.38629
|
|
4932 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4933 37 2.53331 3.02441 0.20344 2.88069 37 - -
|
|
4934 1.38629 1.38629 1.38629 1.38629
|
|
4935 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4936 38 2.81865 0.23582 2.88868 2.35662 38 - -
|
|
4937 1.38629 1.38629 1.38629 1.38629
|
|
4938 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4939 39 2.53331 3.02441 0.20344 2.88069 39 - -
|
|
4940 1.38629 1.38629 1.38629 1.38629
|
|
4941 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4942 40 2.57915 2.25909 2.64442 0.28946 40 - -
|
|
4943 1.38629 1.38629 1.38629 1.38629
|
|
4944 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4945 41 2.81865 0.23582 2.88868 2.35662 41 - -
|
|
4946 1.38629 1.38629 1.38629 1.38629
|
|
4947 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4948 42 2.53331 3.02441 0.20344 2.88069 42 - -
|
|
4949 1.38629 1.38629 1.38629 1.38629
|
|
4950 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4951 43 2.53331 3.02441 0.20344 2.88069 43 - -
|
|
4952 1.38629 1.38629 1.38629 1.38629
|
|
4953 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4954 44 2.57915 2.25909 2.64442 0.28946 44 - -
|
|
4955 1.38629 1.38629 1.38629 1.38629
|
|
4956 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4957 45 2.57915 2.25909 2.64442 0.28946 45 - -
|
|
4958 1.38629 1.38629 1.38629 1.38629
|
|
4959 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
4960 //
|
|
4961 HMMER3/b [3.0 | March 2010]
|
|
4962 NAME 3_End_Chlorophyta_58S_end_twob_long
|
|
4963 LENG 45
|
|
4964 ALPH DNA
|
|
4965 RF no
|
|
4966 CS no
|
|
4967 MAP yes
|
|
4968 DATE Sat Jan 28 01:04:41 2012
|
|
4969 NSEQ 2
|
|
4970 EFFN 2.000000
|
|
4971 CKSUM 1824079490
|
|
4972 STATS LOCAL MSV -7.5181 0.72709
|
|
4973 STATS LOCAL VITERBI -8.2910 0.72709
|
|
4974 STATS LOCAL FORWARD -3.1134 0.72709
|
|
4975 HMM A C G T
|
|
4976 m->m m->i m->d i->m i->i d->m d->d
|
|
4977 COMPO 1.92688 1.15177 1.08069 1.61465
|
|
4978 1.38629 1.38629 1.38629 1.38629
|
|
4979 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
4980 1 2.53331 3.02441 0.20344 2.88069 1 - -
|
|
4981 1.38629 1.38629 1.38629 1.38629
|
|
4982 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4983 2 2.81865 0.23582 2.88868 2.35662 2 - -
|
|
4984 1.38629 1.38629 1.38629 1.38629
|
|
4985 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4986 3 2.53331 3.02441 0.20344 2.88069 3 - -
|
|
4987 1.38629 1.38629 1.38629 1.38629
|
|
4988 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4989 4 2.81865 0.23582 2.88868 2.35662 4 - -
|
|
4990 1.38629 1.38629 1.38629 1.38629
|
|
4991 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4992 5 2.81865 0.23582 2.88868 2.35662 5 - -
|
|
4993 1.38629 1.38629 1.38629 1.38629
|
|
4994 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4995 6 2.81865 0.23582 2.88868 2.35662 6 - -
|
|
4996 1.38629 1.38629 1.38629 1.38629
|
|
4997 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
4998 7 2.53331 3.02441 0.20344 2.88069 7 - -
|
|
4999 1.38629 1.38629 1.38629 1.38629
|
|
5000 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5001 8 0.23862 2.84929 2.43386 2.70756 8 - -
|
|
5002 1.38629 1.38629 1.38629 1.38629
|
|
5003 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5004 9 2.53331 3.02441 0.20344 2.88069 9 - -
|
|
5005 1.38629 1.38629 1.38629 1.38629
|
|
5006 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5007 10 2.53331 3.02441 0.20344 2.88069 10 - -
|
|
5008 1.38629 1.38629 1.38629 1.38629
|
|
5009 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5010 11 2.81865 0.23582 2.88868 2.35662 11 - -
|
|
5011 1.38629 1.38629 1.38629 1.38629
|
|
5012 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5013 12 2.57915 2.25909 2.64442 0.28946 12 - -
|
|
5014 1.38629 1.38629 1.38629 1.38629
|
|
5015 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5016 13 2.57915 2.25909 2.64442 0.28946 13 - -
|
|
5017 1.38629 1.38629 1.38629 1.38629
|
|
5018 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5019 14 2.81865 0.23582 2.88868 2.35662 14 - -
|
|
5020 1.38629 1.38629 1.38629 1.38629
|
|
5021 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5022 15 2.53331 3.02441 0.20344 2.88069 15 - -
|
|
5023 1.38629 1.38629 1.38629 1.38629
|
|
5024 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5025 16 2.53331 3.02441 0.20344 2.88069 16 - -
|
|
5026 1.38629 1.38629 1.38629 1.38629
|
|
5027 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5028 17 2.81865 0.23582 2.88868 2.35662 17 - -
|
|
5029 1.38629 1.38629 1.38629 1.38629
|
|
5030 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5031 18 2.81865 0.23582 2.88868 2.35662 18 - -
|
|
5032 1.38629 1.38629 1.38629 1.38629
|
|
5033 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5034 19 2.53331 3.02441 0.20344 2.88069 19 - -
|
|
5035 1.38629 1.38629 1.38629 1.38629
|
|
5036 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5037 20 0.23862 2.84929 2.43386 2.70756 20 - -
|
|
5038 1.38629 1.38629 1.38629 1.38629
|
|
5039 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5040 21 2.53331 3.02441 0.20344 2.88069 21 - -
|
|
5041 1.38629 1.38629 1.38629 1.38629
|
|
5042 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5043 22 2.53331 3.02441 0.20344 2.88069 22 - -
|
|
5044 1.38629 1.38629 1.38629 1.38629
|
|
5045 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5046 23 2.53331 3.02441 0.20344 2.88069 23 - -
|
|
5047 1.38629 1.38629 1.38629 1.38629
|
|
5048 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5049 24 2.81865 0.23582 2.88868 2.35662 24 - -
|
|
5050 1.38629 1.38629 1.38629 1.38629
|
|
5051 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5052 25 0.23862 2.84929 2.43386 2.70756 25 - -
|
|
5053 1.38629 1.38629 1.38629 1.38629
|
|
5054 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5055 26 2.57915 2.25909 2.64442 0.28946 26 - -
|
|
5056 1.38629 1.38629 1.38629 1.38629
|
|
5057 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5058 27 2.53331 3.02441 0.20344 2.88069 27 - -
|
|
5059 1.38629 1.38629 1.38629 1.38629
|
|
5060 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5061 28 2.81865 0.23582 2.88868 2.35662 28 - -
|
|
5062 1.38629 1.38629 1.38629 1.38629
|
|
5063 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5064 29 2.81865 0.23582 2.88868 2.35662 29 - -
|
|
5065 1.38629 1.38629 1.38629 1.38629
|
|
5066 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5067 30 2.57915 2.25909 2.64442 0.28946 30 - -
|
|
5068 1.38629 1.38629 1.38629 1.38629
|
|
5069 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5070 31 2.53331 3.02441 0.20344 2.88069 31 - -
|
|
5071 1.38629 1.38629 1.38629 1.38629
|
|
5072 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5073 32 2.81865 0.23582 2.88868 2.35662 32 - -
|
|
5074 1.38629 1.38629 1.38629 1.38629
|
|
5075 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5076 33 2.81865 0.23582 2.88868 2.35662 33 - -
|
|
5077 1.38629 1.38629 1.38629 1.38629
|
|
5078 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5079 34 2.57915 2.25909 2.64442 0.28946 34 - -
|
|
5080 1.38629 1.38629 1.38629 1.38629
|
|
5081 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5082 35 2.81865 0.23582 2.88868 2.35662 35 - -
|
|
5083 1.38629 1.38629 1.38629 1.38629
|
|
5084 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5085 36 0.23862 2.84929 2.43386 2.70756 36 - -
|
|
5086 1.38629 1.38629 1.38629 1.38629
|
|
5087 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5088 37 2.53331 3.02441 0.20344 2.88069 37 - -
|
|
5089 1.38629 1.38629 1.38629 1.38629
|
|
5090 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5091 38 2.81865 0.23582 2.88868 2.35662 38 - -
|
|
5092 1.38629 1.38629 1.38629 1.38629
|
|
5093 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5094 39 2.53331 3.02441 0.20344 2.88069 39 - -
|
|
5095 1.38629 1.38629 1.38629 1.38629
|
|
5096 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5097 40 2.57915 2.25909 2.64442 0.28946 40 - -
|
|
5098 1.38629 1.38629 1.38629 1.38629
|
|
5099 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5100 41 2.81865 0.23582 2.88868 2.35662 41 - -
|
|
5101 1.38629 1.38629 1.38629 1.38629
|
|
5102 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5103 42 2.53331 3.02441 0.20344 2.88069 42 - -
|
|
5104 1.38629 1.38629 1.38629 1.38629
|
|
5105 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5106 43 2.53331 3.02441 0.20344 2.88069 43 - -
|
|
5107 1.38629 1.38629 1.38629 1.38629
|
|
5108 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5109 44 2.57915 2.25909 2.64442 0.28946 44 - -
|
|
5110 1.38629 1.38629 1.38629 1.38629
|
|
5111 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5112 45 2.57915 2.25909 2.64442 0.28946 45 - -
|
|
5113 1.38629 1.38629 1.38629 1.38629
|
|
5114 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
5115 //
|
|
5116 HMMER3/b [3.0 | March 2010]
|
|
5117 NAME 3_End_Chlorophyta_58S_end_twoc_long
|
|
5118 LENG 45
|
|
5119 ALPH DNA
|
|
5120 RF no
|
|
5121 CS no
|
|
5122 MAP yes
|
|
5123 DATE Sat Jan 28 01:04:47 2012
|
|
5124 NSEQ 15
|
|
5125 EFFN 3.475342
|
|
5126 CKSUM 461947662
|
|
5127 STATS LOCAL MSV -7.2050 0.71933
|
|
5128 STATS LOCAL VITERBI -7.8038 0.71933
|
|
5129 STATS LOCAL FORWARD -4.0938 0.71933
|
|
5130 HMM A C G T
|
|
5131 m->m m->i m->d i->m i->i d->m d->d
|
|
5132 COMPO 1.77648 1.19246 1.17175 1.52571
|
|
5133 1.38629 1.38629 1.38629 1.38629
|
|
5134 0.03588 4.03872 4.03872 1.46634 0.26236 0.00000 *
|
|
5135 1 2.98048 3.63588 0.11203 3.54560 1 - -
|
|
5136 1.38629 1.38629 1.38629 1.38629
|
|
5137 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
|
|
5138 2 3.48793 0.12386 3.53504 2.86874 2 - -
|
|
5139 1.38629 1.38629 1.38629 1.38629
|
|
5140 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
|
|
5141 3 2.98048 3.63588 0.11203 3.54560 3 - -
|
|
5142 1.38629 1.38629 1.38629 1.38629
|
|
5143 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
|
|
5144 4 3.48793 0.12386 3.53504 2.86874 4 - -
|
|
5145 1.38629 1.38629 1.38629 1.38629
|
|
5146 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
|
|
5147 5 3.13697 2.62586 3.18327 0.17107 5 - -
|
|
5148 1.38629 1.38629 1.38629 1.38629
|
|
5149 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
|
|
5150 6 3.48793 0.12386 3.53504 2.86874 6 - -
|
|
5151 1.38629 1.38629 1.38629 1.38629
|
|
5152 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
|
|
5153 7 2.98048 3.63588 0.11203 3.54560 7 - -
|
|
5154 1.38629 1.38629 1.38629 1.38629
|
|
5155 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
|
|
5156 8 0.13576 3.42792 2.83279 3.33413 8 - -
|
|
5157 1.38629 1.38629 1.38629 1.38629
|
|
5158 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
|
|
5159 9 3.48793 0.12386 3.53504 2.86874 9 - -
|
|
5160 1.38629 1.38629 1.38629 1.38629
|
|
5161 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
|
|
5162 10 2.43808 1.01739 2.50945 0.75541 10 - -
|
|
5163 1.38629 1.38629 1.38629 1.38629
|
|
5164 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
|
|
5165 11 3.48793 0.12386 3.53504 2.86874 11 - -
|
|
5166 1.38629 1.38629 1.38629 1.38629
|
|
5167 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
|
|
5168 12 2.78360 0.35902 2.85076 1.70360 12 - -
|
|
5169 1.38629 1.38629 1.38629 1.38629
|
|
5170 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
|
|
5171 13 3.13697 2.62586 3.18327 0.17107 13 - -
|
|
5172 1.38629 1.38629 1.38629 1.38629
|
|
5173 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
|
|
5174 14 3.48793 0.12386 3.53504 2.86874 14 - -
|
|
5175 1.38629 1.38629 1.38629 1.38629
|
|
5176 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
|
|
5177 15 2.98048 3.63588 0.11203 3.54560 15 - -
|
|
5178 1.38629 1.38629 1.38629 1.38629
|
|
5179 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
|
|
5180 16 2.98048 3.63588 0.11203 3.54560 16 - -
|
|
5181 1.38629 1.38629 1.38629 1.38629
|
|
5182 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
|
|
5183 17 0.78647 2.54355 0.98033 2.39936 17 - -
|
|
5184 1.38629 1.38629 1.38629 1.38629
|
|
5185 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
|
|
5186 18 2.98048 3.63588 0.11203 3.54560 18 - -
|
|
5187 1.38629 1.38629 1.38629 1.38629
|
|
5188 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
|
|
5189 19 0.13576 3.42792 2.83279 3.33413 19 - -
|
|
5190 1.38629 1.38629 1.38629 1.38629
|
|
5191 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
|
|
5192 20 0.13576 3.42792 2.83279 3.33413 20 - -
|
|
5193 1.38629 1.38629 1.38629 1.38629
|
|
5194 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
|
|
5195 21 2.98048 3.63588 0.11203 3.54560 21 - -
|
|
5196 1.38629 1.38629 1.38629 1.38629
|
|
5197 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
|
|
5198 22 0.13576 3.42792 2.83279 3.33413 22 - -
|
|
5199 1.38629 1.38629 1.38629 1.38629
|
|
5200 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
|
|
5201 23 2.98048 3.63588 0.11203 3.54560 23 - -
|
|
5202 1.38629 1.38629 1.38629 1.38629
|
|
5203 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
|
|
5204 24 3.48793 0.12386 3.53504 2.86874 24 - -
|
|
5205 1.38629 1.38629 1.38629 1.38629
|
|
5206 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
|
|
5207 25 0.13576 3.42792 2.83279 3.33413 25 - -
|
|
5208 1.38629 1.38629 1.38629 1.38629
|
|
5209 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
|
|
5210 26 3.13697 2.62586 3.18327 0.17107 26 - -
|
|
5211 1.38629 1.38629 1.38629 1.38629
|
|
5212 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
|
|
5213 27 2.98048 3.63588 0.11203 3.54560 27 - -
|
|
5214 1.38629 1.38629 1.38629 1.38629
|
|
5215 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
|
|
5216 28 3.13697 2.62586 3.18327 0.17107 28 - -
|
|
5217 1.38629 1.38629 1.38629 1.38629
|
|
5218 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
|
|
5219 29 3.48793 0.12386 3.53504 2.86874 29 - -
|
|
5220 1.38629 1.38629 1.38629 1.38629
|
|
5221 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
|
|
5222 30 3.13697 2.62586 3.18327 0.17107 30 - -
|
|
5223 1.38629 1.38629 1.38629 1.38629
|
|
5224 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
|
|
5225 31 2.98048 3.63588 0.11203 3.54560 31 - -
|
|
5226 1.38629 1.38629 1.38629 1.38629
|
|
5227 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
|
|
5228 32 3.48793 0.12386 3.53504 2.86874 32 - -
|
|
5229 1.38629 1.38629 1.38629 1.38629
|
|
5230 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
|
|
5231 33 3.48793 0.12386 3.53504 2.86874 33 - -
|
|
5232 1.38629 1.38629 1.38629 1.38629
|
|
5233 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
|
|
5234 34 3.13697 2.62586 3.18327 0.17107 34 - -
|
|
5235 1.38629 1.38629 1.38629 1.38629
|
|
5236 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
|
|
5237 35 3.48793 0.12386 3.53504 2.86874 35 - -
|
|
5238 1.38629 1.38629 1.38629 1.38629
|
|
5239 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
|
|
5240 36 0.13576 3.42792 2.83279 3.33413 36 - -
|
|
5241 1.38629 1.38629 1.38629 1.38629
|
|
5242 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
|
|
5243 37 2.98048 3.63588 0.11203 3.54560 37 - -
|
|
5244 1.38629 1.38629 1.38629 1.38629
|
|
5245 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
|
|
5246 38 3.48793 0.12386 3.53504 2.86874 38 - -
|
|
5247 1.38629 1.38629 1.38629 1.38629
|
|
5248 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
|
|
5249 39 2.98048 3.63588 0.11203 3.54560 39 - -
|
|
5250 1.38629 1.38629 1.38629 1.38629
|
|
5251 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
|
|
5252 40 3.13697 2.62586 3.18327 0.17107 40 - -
|
|
5253 1.38629 1.38629 1.38629 1.38629
|
|
5254 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
|
|
5255 41 3.48793 0.12386 3.53504 2.86874 41 - -
|
|
5256 1.38629 1.38629 1.38629 1.38629
|
|
5257 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
|
|
5258 42 2.98048 3.63588 0.11203 3.54560 42 - -
|
|
5259 1.38629 1.38629 1.38629 1.38629
|
|
5260 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
|
|
5261 43 2.98048 3.63588 0.11203 3.54560 43 - -
|
|
5262 1.38629 1.38629 1.38629 1.38629
|
|
5263 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
|
|
5264 44 3.13697 2.62586 3.18327 0.17107 44 - -
|
|
5265 1.38629 1.38629 1.38629 1.38629
|
|
5266 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
|
|
5267 45 3.13697 2.62586 3.18327 0.17107 45 - -
|
|
5268 1.38629 1.38629 1.38629 1.38629
|
|
5269 0.01810 4.02094 * 1.46634 0.26236 0.00000 *
|
|
5270 //
|
|
5271 HMMER3/b [3.0 | March 2010]
|
|
5272 NAME 3_End_Chlorophyta_58S_end_twod_long
|
|
5273 LENG 45
|
|
5274 ALPH DNA
|
|
5275 RF no
|
|
5276 CS no
|
|
5277 MAP yes
|
|
5278 DATE Sat Jan 28 01:04:52 2012
|
|
5279 NSEQ 8
|
|
5280 EFFN 3.128906
|
|
5281 CKSUM 2498164724
|
|
5282 STATS LOCAL MSV -7.9579 0.71933
|
|
5283 STATS LOCAL VITERBI -7.7563 0.71933
|
|
5284 STATS LOCAL FORWARD -3.6919 0.71933
|
|
5285 HMM A C G T
|
|
5286 m->m m->i m->d i->m i->i d->m d->d
|
|
5287 COMPO 1.82357 1.15560 1.14661 1.58002
|
|
5288 1.38629 1.38629 1.38629 1.38629
|
|
5289 0.03825 3.97573 3.97573 1.46634 0.26236 0.00000 *
|
|
5290 1 2.90228 3.52232 0.12458 3.42031 1 - -
|
|
5291 1.38629 1.38629 1.38629 1.38629
|
|
5292 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
5293 2 3.35912 0.13939 3.41165 2.77481 2 - -
|
|
5294 1.38629 1.38629 1.38629 1.38629
|
|
5295 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
5296 3 2.90228 3.52232 0.12458 3.42031 3 - -
|
|
5297 1.38629 1.38629 1.38629 1.38629
|
|
5298 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
5299 4 3.35912 0.13939 3.41165 2.77481 4 - -
|
|
5300 1.38629 1.38629 1.38629 1.38629
|
|
5301 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
5302 5 3.02437 2.55419 3.07496 0.18939 5 - -
|
|
5303 1.38629 1.38629 1.38629 1.38629
|
|
5304 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
5305 6 3.35912 0.13939 3.41165 2.77481 6 - -
|
|
5306 1.38629 1.38629 1.38629 1.38629
|
|
5307 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
5308 7 2.90228 3.52232 0.12458 3.42031 7 - -
|
|
5309 1.38629 1.38629 1.38629 1.38629
|
|
5310 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
5311 8 0.15066 3.31617 2.76009 3.21184 8 - -
|
|
5312 1.38629 1.38629 1.38629 1.38629
|
|
5313 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
5314 9 2.90228 3.52232 0.12458 3.42031 9 - -
|
|
5315 1.38629 1.38629 1.38629 1.38629
|
|
5316 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
5317 10 3.35912 0.13939 3.41165 2.77481 10 - -
|
|
5318 1.38629 1.38629 1.38629 1.38629
|
|
5319 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
5320 11 3.35912 0.13939 3.41165 2.77481 11 - -
|
|
5321 1.38629 1.38629 1.38629 1.38629
|
|
5322 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
5323 12 3.35912 0.13939 3.41165 2.77481 12 - -
|
|
5324 1.38629 1.38629 1.38629 1.38629
|
|
5325 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
5326 13 3.02437 2.55419 3.07496 0.18939 13 - -
|
|
5327 1.38629 1.38629 1.38629 1.38629
|
|
5328 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
5329 14 3.35912 0.13939 3.41165 2.77481 14 - -
|
|
5330 1.38629 1.38629 1.38629 1.38629
|
|
5331 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
5332 15 2.90228 3.52232 0.12458 3.42031 15 - -
|
|
5333 1.38629 1.38629 1.38629 1.38629
|
|
5334 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
5335 16 2.90228 3.52232 0.12458 3.42031 16 - -
|
|
5336 1.38629 1.38629 1.38629 1.38629
|
|
5337 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
5338 17 2.90228 3.52232 0.12458 3.42031 17 - -
|
|
5339 1.38629 1.38629 1.38629 1.38629
|
|
5340 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
5341 18 3.35912 0.13939 3.41165 2.77481 18 - -
|
|
5342 1.38629 1.38629 1.38629 1.38629
|
|
5343 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
5344 19 0.15066 3.31617 2.76009 3.21184 19 - -
|
|
5345 1.38629 1.38629 1.38629 1.38629
|
|
5346 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
5347 20 0.15066 3.31617 2.76009 3.21184 20 - -
|
|
5348 1.38629 1.38629 1.38629 1.38629
|
|
5349 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
5350 21 2.90228 3.52232 0.12458 3.42031 21 - -
|
|
5351 1.38629 1.38629 1.38629 1.38629
|
|
5352 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
5353 22 0.15066 3.31617 2.76009 3.21184 22 - -
|
|
5354 1.38629 1.38629 1.38629 1.38629
|
|
5355 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
5356 23 2.90228 3.52232 0.12458 3.42031 23 - -
|
|
5357 1.38629 1.38629 1.38629 1.38629
|
|
5358 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
5359 24 3.35912 0.13939 3.41165 2.77481 24 - -
|
|
5360 1.38629 1.38629 1.38629 1.38629
|
|
5361 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
5362 25 0.15066 3.31617 2.76009 3.21184 25 - -
|
|
5363 1.38629 1.38629 1.38629 1.38629
|
|
5364 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
5365 26 3.02437 2.55419 3.07496 0.18939 26 - -
|
|
5366 1.38629 1.38629 1.38629 1.38629
|
|
5367 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
5368 27 2.90228 3.52232 0.12458 3.42031 27 - -
|
|
5369 1.38629 1.38629 1.38629 1.38629
|
|
5370 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
5371 28 3.02437 2.55419 3.07496 0.18939 28 - -
|
|
5372 1.38629 1.38629 1.38629 1.38629
|
|
5373 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
5374 29 3.35912 0.13939 3.41165 2.77481 29 - -
|
|
5375 1.38629 1.38629 1.38629 1.38629
|
|
5376 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
5377 30 3.02437 2.55419 3.07496 0.18939 30 - -
|
|
5378 1.38629 1.38629 1.38629 1.38629
|
|
5379 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
5380 31 2.90228 3.52232 0.12458 3.42031 31 - -
|
|
5381 1.38629 1.38629 1.38629 1.38629
|
|
5382 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
5383 32 3.35912 0.13939 3.41165 2.77481 32 - -
|
|
5384 1.38629 1.38629 1.38629 1.38629
|
|
5385 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
5386 33 3.35912 0.13939 3.41165 2.77481 33 - -
|
|
5387 1.38629 1.38629 1.38629 1.38629
|
|
5388 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
5389 34 3.02437 2.55419 3.07496 0.18939 34 - -
|
|
5390 1.38629 1.38629 1.38629 1.38629
|
|
5391 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
5392 35 3.35912 0.13939 3.41165 2.77481 35 - -
|
|
5393 1.38629 1.38629 1.38629 1.38629
|
|
5394 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
5395 36 0.15066 3.31617 2.76009 3.21184 36 - -
|
|
5396 1.38629 1.38629 1.38629 1.38629
|
|
5397 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
5398 37 2.90228 3.52232 0.12458 3.42031 37 - -
|
|
5399 1.38629 1.38629 1.38629 1.38629
|
|
5400 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
5401 38 3.35912 0.13939 3.41165 2.77481 38 - -
|
|
5402 1.38629 1.38629 1.38629 1.38629
|
|
5403 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
5404 39 2.90228 3.52232 0.12458 3.42031 39 - -
|
|
5405 1.38629 1.38629 1.38629 1.38629
|
|
5406 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
5407 40 3.02437 2.55419 3.07496 0.18939 40 - -
|
|
5408 1.38629 1.38629 1.38629 1.38629
|
|
5409 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
5410 41 3.35912 0.13939 3.41165 2.77481 41 - -
|
|
5411 1.38629 1.38629 1.38629 1.38629
|
|
5412 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
5413 42 2.90228 3.52232 0.12458 3.42031 42 - -
|
|
5414 1.38629 1.38629 1.38629 1.38629
|
|
5415 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
5416 43 2.90228 3.52232 0.12458 3.42031 43 - -
|
|
5417 1.38629 1.38629 1.38629 1.38629
|
|
5418 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
5419 44 3.02437 2.55419 3.07496 0.18939 44 - -
|
|
5420 1.38629 1.38629 1.38629 1.38629
|
|
5421 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
|
|
5422 45 3.02437 2.55419 3.07496 0.18939 45 - -
|
|
5423 1.38629 1.38629 1.38629 1.38629
|
|
5424 0.01931 3.95679 * 1.46634 0.26236 0.00000 *
|
|
5425 //
|
|
5426 HMMER3/b [3.0 | March 2010]
|
|
5427 NAME 2_5.8_Chlorophyta_58S_start_four_long
|
|
5428 LENG 45
|
|
5429 ALPH DNA
|
|
5430 RF no
|
|
5431 CS no
|
|
5432 MAP yes
|
|
5433 DATE Fri Jan 27 23:54:20 2012
|
|
5434 NSEQ 48
|
|
5435 EFFN 3.495117
|
|
5436 CKSUM 2952332647
|
|
5437 STATS LOCAL MSV -7.2226 0.71933
|
|
5438 STATS LOCAL VITERBI -7.7596 0.71933
|
|
5439 STATS LOCAL FORWARD -3.9921 0.71933
|
|
5440 HMM A C G T
|
|
5441 m->m m->i m->d i->m i->i d->m d->d
|
|
5442 COMPO 1.54562 1.42507 1.04449 1.63755
|
|
5443 1.38629 1.38629 1.38629 1.38629
|
|
5444 0.03575 4.04219 4.04219 1.46634 0.26236 0.00000 *
|
|
5445 1 0.40589 2.56427 2.39377 1.79967 1 - -
|
|
5446 1.38629 1.38629 1.38629 1.38629
|
|
5447 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
|
|
5448 2 0.13501 3.43391 2.83666 3.34071 2 - -
|
|
5449 1.38629 1.38629 1.38629 1.38629
|
|
5450 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
|
|
5451 3 0.13501 3.43391 2.83666 3.34071 3 - -
|
|
5452 1.38629 1.38629 1.38629 1.38629
|
|
5453 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
|
|
5454 4 2.98459 3.64191 0.11140 3.55227 4 - -
|
|
5455 1.38629 1.38629 1.38629 1.38629
|
|
5456 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
|
|
5457 5 3.49482 0.12308 3.54162 2.87371 5 - -
|
|
5458 1.38629 1.38629 1.38629 1.38629
|
|
5459 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
|
|
5460 6 0.13501 3.43391 2.83666 3.34071 6 - -
|
|
5461 1.38629 1.38629 1.38629 1.38629
|
|
5462 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
|
|
5463 7 3.14310 2.62975 3.18915 0.17014 7 - -
|
|
5464 1.38629 1.38629 1.38629 1.38629
|
|
5465 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
|
|
5466 8 2.98459 3.64191 0.11140 3.55227 8 - -
|
|
5467 1.38629 1.38629 1.38629 1.38629
|
|
5468 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
|
|
5469 9 3.49482 0.12308 3.54162 2.87371 9 - -
|
|
5470 1.38629 1.38629 1.38629 1.38629
|
|
5471 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
|
|
5472 10 2.98459 3.64191 0.11140 3.55227 10 - -
|
|
5473 1.38629 1.38629 1.38629 1.38629
|
|
5474 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
|
|
5475 11 3.01425 2.32087 3.06521 0.21557 11 - -
|
|
5476 1.38629 1.38629 1.38629 1.38629
|
|
5477 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
|
|
5478 12 1.55253 2.79478 0.41999 2.65775 12 - -
|
|
5479 1.38629 1.38629 1.38629 1.38629
|
|
5480 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
|
|
5481 13 2.98459 3.64191 0.11140 3.55227 13 - -
|
|
5482 1.38629 1.38629 1.38629 1.38629
|
|
5483 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
|
|
5484 14 3.14310 2.62975 3.18915 0.17014 14 - -
|
|
5485 1.38629 1.38629 1.38629 1.38629
|
|
5486 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
|
|
5487 15 2.88296 3.18424 0.14323 3.32242 15 - -
|
|
5488 1.38629 1.38629 1.38629 1.38629
|
|
5489 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
|
|
5490 16 2.98459 3.64191 0.11140 3.55227 16 - -
|
|
5491 1.38629 1.38629 1.38629 1.38629
|
|
5492 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
|
|
5493 17 0.13501 3.43391 2.83666 3.34071 17 - -
|
|
5494 1.38629 1.38629 1.38629 1.38629
|
|
5495 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
|
|
5496 18 3.49482 0.12308 3.54162 2.87371 18 - -
|
|
5497 1.38629 1.38629 1.38629 1.38629
|
|
5498 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
|
|
5499 19 2.98459 3.64191 0.11140 3.55227 19 - -
|
|
5500 1.38629 1.38629 1.38629 1.38629
|
|
5501 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
|
|
5502 20 2.98459 3.64191 0.11140 3.55227 20 - -
|
|
5503 1.38629 1.38629 1.38629 1.38629
|
|
5504 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
|
|
5505 21 3.49482 0.12308 3.54162 2.87371 21 - -
|
|
5506 1.38629 1.38629 1.38629 1.38629
|
|
5507 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
|
|
5508 22 3.14310 2.62975 3.18915 0.17014 22 - -
|
|
5509 1.38629 1.38629 1.38629 1.38629
|
|
5510 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
|
|
5511 23 3.49482 0.12308 3.54162 2.87371 23 - -
|
|
5512 1.38629 1.38629 1.38629 1.38629
|
|
5513 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
|
|
5514 24 2.98459 3.64191 0.11140 3.55227 24 - -
|
|
5515 1.38629 1.38629 1.38629 1.38629
|
|
5516 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
|
|
5517 25 2.98459 3.64191 0.11140 3.55227 25 - -
|
|
5518 1.38629 1.38629 1.38629 1.38629
|
|
5519 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
|
|
5520 26 3.14310 2.62975 3.18915 0.17014 26 - -
|
|
5521 1.38629 1.38629 1.38629 1.38629
|
|
5522 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
|
|
5523 27 3.14310 2.62975 3.18915 0.17014 27 - -
|
|
5524 1.38629 1.38629 1.38629 1.38629
|
|
5525 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
|
|
5526 28 3.49482 0.12308 3.54162 2.87371 28 - -
|
|
5527 1.38629 1.38629 1.38629 1.38629
|
|
5528 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
|
|
5529 29 3.18468 0.19693 3.24155 2.32019 29 - -
|
|
5530 1.38629 1.38629 1.38629 1.38629
|
|
5531 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
|
|
5532 30 3.36400 0.15102 3.41504 2.62150 30 - -
|
|
5533 1.38629 1.38629 1.38629 1.38629
|
|
5534 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
|
|
5535 31 2.98459 3.64191 0.11140 3.55227 31 - -
|
|
5536 1.38629 1.38629 1.38629 1.38629
|
|
5537 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
|
|
5538 32 2.61430 0.48908 2.68457 1.40511 32 - -
|
|
5539 1.38629 1.38629 1.38629 1.38629
|
|
5540 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
|
|
5541 33 2.98459 3.64191 0.11140 3.55227 33 - -
|
|
5542 1.38629 1.38629 1.38629 1.38629
|
|
5543 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
|
|
5544 34 3.14310 2.62975 3.18915 0.17014 34 - -
|
|
5545 1.38629 1.38629 1.38629 1.38629
|
|
5546 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
|
|
5547 35 3.49482 0.12308 3.54162 2.87371 35 - -
|
|
5548 1.38629 1.38629 1.38629 1.38629
|
|
5549 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
|
|
5550 36 2.98459 3.64191 0.11140 3.55227 36 - -
|
|
5551 1.38629 1.38629 1.38629 1.38629
|
|
5552 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
|
|
5553 37 0.13501 3.43391 2.83666 3.34071 37 - -
|
|
5554 1.38629 1.38629 1.38629 1.38629
|
|
5555 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
|
|
5556 38 3.14310 2.62975 3.18915 0.17014 38 - -
|
|
5557 1.38629 1.38629 1.38629 1.38629
|
|
5558 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
|
|
5559 39 2.98459 3.64191 0.11140 3.55227 39 - -
|
|
5560 1.38629 1.38629 1.38629 1.38629
|
|
5561 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
|
|
5562 40 0.13501 3.43391 2.83666 3.34071 40 - -
|
|
5563 1.38629 1.38629 1.38629 1.38629
|
|
5564 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
|
|
5565 41 0.13501 3.43391 2.83666 3.34071 41 - -
|
|
5566 1.38629 1.38629 1.38629 1.38629
|
|
5567 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
|
|
5568 42 2.98459 3.64191 0.11140 3.55227 42 - -
|
|
5569 1.38629 1.38629 1.38629 1.38629
|
|
5570 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
|
|
5571 43 2.98459 3.64191 0.11140 3.55227 43 - -
|
|
5572 1.38629 1.38629 1.38629 1.38629
|
|
5573 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
|
|
5574 44 0.13501 3.43391 2.83666 3.34071 44 - -
|
|
5575 1.38629 1.38629 1.38629 1.38629
|
|
5576 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
|
|
5577 45 3.49482 0.12308 3.54162 2.87371 45 - -
|
|
5578 1.38629 1.38629 1.38629 1.38629
|
|
5579 0.01803 4.02448 * 1.46634 0.26236 0.00000 *
|
|
5580 //
|
|
5581 HMMER3/b [3.0 | March 2010]
|
|
5582 NAME 2_5.8_Chlorophyta_58S_start_one_long
|
|
5583 LENG 45
|
|
5584 ALPH DNA
|
|
5585 RF no
|
|
5586 CS no
|
|
5587 MAP yes
|
|
5588 DATE Fri Jan 27 23:53:55 2012
|
|
5589 NSEQ 331
|
|
5590 EFFN 3.851128
|
|
5591 CKSUM 2567582358
|
|
5592 STATS LOCAL MSV -7.4488 0.71932
|
|
5593 STATS LOCAL VITERBI -7.4861 0.71932
|
|
5594 STATS LOCAL FORWARD -4.0022 0.71932
|
|
5595 HMM A C G T
|
|
5596 m->m m->i m->d i->m i->i d->m d->d
|
|
5597 COMPO 1.16656 1.27448 1.60501 1.56974
|
|
5598 1.38629 1.38629 1.38629 1.38629
|
|
5599 0.03361 4.10283 4.10283 1.46634 0.26236 0.00000 *
|
|
5600 1 3.50422 0.13202 3.54985 2.73523 1 - -
|
|
5601 1.38629 1.38629 1.38629 1.38629
|
|
5602 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
|
|
5603 2 0.12300 3.53547 2.90198 3.45220 2 - -
|
|
5604 1.38629 1.38629 1.38629 1.38629
|
|
5605 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
|
|
5606 3 0.12300 3.53547 2.90198 3.45220 3 - -
|
|
5607 1.38629 1.38629 1.38629 1.38629
|
|
5608 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
|
|
5609 4 3.61086 0.11087 3.65245 2.95674 4 - -
|
|
5610 1.38629 1.38629 1.38629 1.38629
|
|
5611 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
|
|
5612 5 3.24813 2.69634 3.29008 0.15496 5 - -
|
|
5613 1.38629 1.38629 1.38629 1.38629
|
|
5614 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
|
|
5615 6 3.61086 0.11087 3.65245 2.95674 6 - -
|
|
5616 1.38629 1.38629 1.38629 1.38629
|
|
5617 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
|
|
5618 7 3.24813 2.69634 3.29008 0.15496 7 - -
|
|
5619 1.38629 1.38629 1.38629 1.38629
|
|
5620 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
|
|
5621 8 3.61086 0.11087 3.65245 2.95674 8 - -
|
|
5622 1.38629 1.38629 1.38629 1.38629
|
|
5623 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
|
|
5624 9 0.15822 3.33237 2.81684 2.97919 9 - -
|
|
5625 1.38629 1.38629 1.38629 1.38629
|
|
5626 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
|
|
5627 10 0.12300 3.53547 2.90198 3.45220 10 - -
|
|
5628 1.38629 1.38629 1.38629 1.38629
|
|
5629 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
|
|
5630 11 3.61086 0.11087 3.65245 2.95674 11 - -
|
|
5631 1.38629 1.38629 1.38629 1.38629
|
|
5632 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
|
|
5633 12 0.12300 3.53547 2.90198 3.45220 12 - -
|
|
5634 1.38629 1.38629 1.38629 1.38629
|
|
5635 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
|
|
5636 13 0.12300 3.53547 2.90198 3.45220 13 - -
|
|
5637 1.38629 1.38629 1.38629 1.38629
|
|
5638 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
|
|
5639 14 3.50903 0.13102 3.55448 2.74453 14 - -
|
|
5640 1.38629 1.38629 1.38629 1.38629
|
|
5641 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
|
|
5642 15 3.05296 3.74278 0.10152 3.66406 15 - -
|
|
5643 1.38629 1.38629 1.38629 1.38629
|
|
5644 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
|
|
5645 16 3.05296 3.74278 0.10152 3.66406 16 - -
|
|
5646 1.38629 1.38629 1.38629 1.38629
|
|
5647 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
|
|
5648 17 0.12300 3.53547 2.90198 3.45220 17 - -
|
|
5649 1.38629 1.38629 1.38629 1.38629
|
|
5650 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
|
|
5651 18 3.24813 2.69634 3.29008 0.15496 18 - -
|
|
5652 1.38629 1.38629 1.38629 1.38629
|
|
5653 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
|
|
5654 19 0.14638 3.44359 2.66951 3.35433 19 - -
|
|
5655 1.38629 1.38629 1.38629 1.38629
|
|
5656 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
|
|
5657 20 3.24813 2.69634 3.29008 0.15496 20 - -
|
|
5658 1.38629 1.38629 1.38629 1.38629
|
|
5659 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
|
|
5660 21 3.15237 0.14262 3.44032 2.84542 21 - -
|
|
5661 1.38629 1.38629 1.38629 1.38629
|
|
5662 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
|
|
5663 22 3.24813 2.69634 3.29008 0.15496 22 - -
|
|
5664 1.38629 1.38629 1.38629 1.38629
|
|
5665 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
|
|
5666 23 2.56157 2.56948 2.98235 0.22870 23 - -
|
|
5667 1.38629 1.38629 1.38629 1.38629
|
|
5668 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
|
|
5669 24 3.05296 3.74278 0.10152 3.66406 24 - -
|
|
5670 1.38629 1.38629 1.38629 1.38629
|
|
5671 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
|
|
5672 25 3.05296 3.74278 0.10152 3.66406 25 - -
|
|
5673 1.38629 1.38629 1.38629 1.38629
|
|
5674 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
|
|
5675 26 3.61086 0.11087 3.65245 2.95674 26 - -
|
|
5676 1.38629 1.38629 1.38629 1.38629
|
|
5677 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
|
|
5678 27 3.24813 2.69634 3.29008 0.15496 27 - -
|
|
5679 1.38629 1.38629 1.38629 1.38629
|
|
5680 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
|
|
5681 28 3.61086 0.11087 3.65245 2.95674 28 - -
|
|
5682 1.38629 1.38629 1.38629 1.38629
|
|
5683 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
|
|
5684 29 2.64088 1.41397 2.70662 0.48003 29 - -
|
|
5685 1.38629 1.38629 1.38629 1.38629
|
|
5686 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
|
|
5687 30 3.46311 0.14077 3.51034 2.65795 30 - -
|
|
5688 1.38629 1.38629 1.38629 1.38629
|
|
5689 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
|
|
5690 31 2.35815 2.89431 0.22091 3.03081 31 - -
|
|
5691 1.38629 1.38629 1.38629 1.38629
|
|
5692 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
|
|
5693 32 2.19068 0.69821 1.79649 1.49252 32 - -
|
|
5694 1.38629 1.38629 1.38629 1.38629
|
|
5695 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
|
|
5696 33 0.12300 3.53547 2.90198 3.45220 33 - -
|
|
5697 1.38629 1.38629 1.38629 1.38629
|
|
5698 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
|
|
5699 34 0.55932 2.20720 2.26768 1.53784 34 - -
|
|
5700 1.38629 1.38629 1.38629 1.38629
|
|
5701 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
|
|
5702 35 3.46311 0.14077 3.51034 2.65795 35 - -
|
|
5703 1.38629 1.38629 1.38629 1.38629
|
|
5704 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
|
|
5705 36 3.05296 3.74278 0.10152 3.66406 36 - -
|
|
5706 1.38629 1.38629 1.38629 1.38629
|
|
5707 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
|
|
5708 37 0.12300 3.53547 2.90198 3.45220 37 - -
|
|
5709 1.38629 1.38629 1.38629 1.38629
|
|
5710 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
|
|
5711 38 3.24813 2.69634 3.29008 0.15496 38 - -
|
|
5712 1.38629 1.38629 1.38629 1.38629
|
|
5713 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
|
|
5714 39 3.05296 3.74278 0.10152 3.66406 39 - -
|
|
5715 1.38629 1.38629 1.38629 1.38629
|
|
5716 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
|
|
5717 40 0.12300 3.53547 2.90198 3.45220 40 - -
|
|
5718 1.38629 1.38629 1.38629 1.38629
|
|
5719 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
|
|
5720 41 0.12300 3.53547 2.90198 3.45220 41 - -
|
|
5721 1.38629 1.38629 1.38629 1.38629
|
|
5722 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
|
|
5723 42 3.05296 3.74278 0.10152 3.66406 42 - -
|
|
5724 1.38629 1.38629 1.38629 1.38629
|
|
5725 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
|
|
5726 43 0.12300 3.53547 2.90198 3.45220 43 - -
|
|
5727 1.38629 1.38629 1.38629 1.38629
|
|
5728 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
|
|
5729 44 0.12300 3.53547 2.90198 3.45220 44 - -
|
|
5730 1.38629 1.38629 1.38629 1.38629
|
|
5731 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
|
|
5732 45 3.61086 0.11087 3.65245 2.95674 45 - -
|
|
5733 1.38629 1.38629 1.38629 1.38629
|
|
5734 0.01695 4.08617 * 1.46634 0.26236 0.00000 *
|
|
5735 //
|
|
5736 HMMER3/b [3.0 | March 2010]
|
|
5737 NAME 2_5.8_Chlorophyta_58S_start_three_long
|
|
5738 LENG 45
|
|
5739 ALPH DNA
|
|
5740 RF no
|
|
5741 CS no
|
|
5742 MAP yes
|
|
5743 DATE Fri Jan 27 23:54:11 2012
|
|
5744 NSEQ 3
|
|
5745 EFFN 3.000000
|
|
5746 CKSUM 1723857228
|
|
5747 STATS LOCAL MSV -7.9701 0.72049
|
|
5748 STATS LOCAL VITERBI -7.6631 0.72049
|
|
5749 STATS LOCAL FORWARD -3.9650 0.72049
|
|
5750 HMM A C G T
|
|
5751 m->m m->i m->d i->m i->i d->m d->d
|
|
5752 COMPO 1.21943 1.38802 1.60191 1.37230
|
|
5753 1.38629 1.38629 1.38629 1.38629
|
|
5754 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
|
|
5755 1 0.15719 3.27118 2.73043 3.16274 1 - -
|
|
5756 1.38629 1.38629 1.38629 1.38629
|
|
5757 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
5758 2 0.15719 3.27118 2.73043 3.16274 2 - -
|
|
5759 1.38629 1.38629 1.38629 1.38629
|
|
5760 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
5761 3 0.15719 3.27118 2.73043 3.16274 3 - -
|
|
5762 1.38629 1.38629 1.38629 1.38629
|
|
5763 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
5764 4 3.30705 0.14631 3.36166 2.73626 4 - -
|
|
5765 1.38629 1.38629 1.38629 1.38629
|
|
5766 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
5767 5 2.97980 2.52563 3.03204 0.19727 5 - -
|
|
5768 1.38629 1.38629 1.38629 1.38629
|
|
5769 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
5770 6 2.97980 2.52563 3.03204 0.19727 6 - -
|
|
5771 1.38629 1.38629 1.38629 1.38629
|
|
5772 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
5773 7 2.97980 2.52563 3.03204 0.19727 7 - -
|
|
5774 1.38629 1.38629 1.38629 1.38629
|
|
5775 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
5776 8 2.97980 2.52563 3.03204 0.19727 8 - -
|
|
5777 1.38629 1.38629 1.38629 1.38629
|
|
5778 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
5779 9 0.15719 3.27118 2.73043 3.16274 9 - -
|
|
5780 1.38629 1.38629 1.38629 1.38629
|
|
5781 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
5782 10 0.15719 3.27118 2.73043 3.16274 10 - -
|
|
5783 1.38629 1.38629 1.38629 1.38629
|
|
5784 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
5785 11 3.30705 0.14631 3.36166 2.73626 11 - -
|
|
5786 1.38629 1.38629 1.38629 1.38629
|
|
5787 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
5788 12 0.15719 3.27118 2.73043 3.16274 12 - -
|
|
5789 1.38629 1.38629 1.38629 1.38629
|
|
5790 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
5791 13 0.15719 3.27118 2.73043 3.16274 13 - -
|
|
5792 1.38629 1.38629 1.38629 1.38629
|
|
5793 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
5794 14 3.30705 0.14631 3.36166 2.73626 14 - -
|
|
5795 1.38629 1.38629 1.38629 1.38629
|
|
5796 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
5797 15 2.86982 3.47591 0.13017 3.36931 15 - -
|
|
5798 1.38629 1.38629 1.38629 1.38629
|
|
5799 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
5800 16 2.86982 3.47591 0.13017 3.36931 16 - -
|
|
5801 1.38629 1.38629 1.38629 1.38629
|
|
5802 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
5803 17 0.15719 3.27118 2.73043 3.16274 17 - -
|
|
5804 1.38629 1.38629 1.38629 1.38629
|
|
5805 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
5806 18 2.97980 2.52563 3.03204 0.19727 18 - -
|
|
5807 1.38629 1.38629 1.38629 1.38629
|
|
5808 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
5809 19 3.30705 0.14631 3.36166 2.73626 19 - -
|
|
5810 1.38629 1.38629 1.38629 1.38629
|
|
5811 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
5812 20 2.97980 2.52563 3.03204 0.19727 20 - -
|
|
5813 1.38629 1.38629 1.38629 1.38629
|
|
5814 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
5815 21 3.30705 0.14631 3.36166 2.73626 21 - -
|
|
5816 1.38629 1.38629 1.38629 1.38629
|
|
5817 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
5818 22 2.97980 2.52563 3.03204 0.19727 22 - -
|
|
5819 1.38629 1.38629 1.38629 1.38629
|
|
5820 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
5821 23 2.97980 2.52563 3.03204 0.19727 23 - -
|
|
5822 1.38629 1.38629 1.38629 1.38629
|
|
5823 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
5824 24 2.86982 3.47591 0.13017 3.36931 24 - -
|
|
5825 1.38629 1.38629 1.38629 1.38629
|
|
5826 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
5827 25 2.86982 3.47591 0.13017 3.36931 25 - -
|
|
5828 1.38629 1.38629 1.38629 1.38629
|
|
5829 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
5830 26 3.30705 0.14631 3.36166 2.73626 26 - -
|
|
5831 1.38629 1.38629 1.38629 1.38629
|
|
5832 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
5833 27 2.97980 2.52563 3.03204 0.19727 27 - -
|
|
5834 1.38629 1.38629 1.38629 1.38629
|
|
5835 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
5836 28 3.30705 0.14631 3.36166 2.73626 28 - -
|
|
5837 1.38629 1.38629 1.38629 1.38629
|
|
5838 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
5839 29 2.97980 2.52563 3.03204 0.19727 29 - -
|
|
5840 1.38629 1.38629 1.38629 1.38629
|
|
5841 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
5842 30 3.30705 0.14631 3.36166 2.73626 30 - -
|
|
5843 1.38629 1.38629 1.38629 1.38629
|
|
5844 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
5845 31 2.86982 3.47591 0.13017 3.36931 31 - -
|
|
5846 1.38629 1.38629 1.38629 1.38629
|
|
5847 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
5848 32 3.30705 0.14631 3.36166 2.73626 32 - -
|
|
5849 1.38629 1.38629 1.38629 1.38629
|
|
5850 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
5851 33 0.15719 3.27118 2.73043 3.16274 33 - -
|
|
5852 1.38629 1.38629 1.38629 1.38629
|
|
5853 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
5854 34 2.97980 2.52563 3.03204 0.19727 34 - -
|
|
5855 1.38629 1.38629 1.38629 1.38629
|
|
5856 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
5857 35 3.30705 0.14631 3.36166 2.73626 35 - -
|
|
5858 1.38629 1.38629 1.38629 1.38629
|
|
5859 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
5860 36 2.86982 3.47591 0.13017 3.36931 36 - -
|
|
5861 1.38629 1.38629 1.38629 1.38629
|
|
5862 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
5863 37 0.15719 3.27118 2.73043 3.16274 37 - -
|
|
5864 1.38629 1.38629 1.38629 1.38629
|
|
5865 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
5866 38 2.97980 2.52563 3.03204 0.19727 38 - -
|
|
5867 1.38629 1.38629 1.38629 1.38629
|
|
5868 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
5869 39 2.86982 3.47591 0.13017 3.36931 39 - -
|
|
5870 1.38629 1.38629 1.38629 1.38629
|
|
5871 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
5872 40 0.15719 3.27118 2.73043 3.16274 40 - -
|
|
5873 1.38629 1.38629 1.38629 1.38629
|
|
5874 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
5875 41 0.15719 3.27118 2.73043 3.16274 41 - -
|
|
5876 1.38629 1.38629 1.38629 1.38629
|
|
5877 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
5878 42 2.86982 3.47591 0.13017 3.36931 42 - -
|
|
5879 1.38629 1.38629 1.38629 1.38629
|
|
5880 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
5881 43 0.15719 3.27118 2.73043 3.16274 43 - -
|
|
5882 1.38629 1.38629 1.38629 1.38629
|
|
5883 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
5884 44 0.15719 3.27118 2.73043 3.16274 44 - -
|
|
5885 1.38629 1.38629 1.38629 1.38629
|
|
5886 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
5887 45 3.30705 0.14631 3.36166 2.73626 45 - -
|
|
5888 1.38629 1.38629 1.38629 1.38629
|
|
5889 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
|
|
5890 //
|
|
5891 HMMER3/b [3.0 | March 2010]
|
|
5892 NAME 2_5.8_Chlorophyta_58S_start_two_long
|
|
5893 LENG 45
|
|
5894 ALPH DNA
|
|
5895 RF no
|
|
5896 CS no
|
|
5897 MAP yes
|
|
5898 DATE Fri Jan 27 23:54:03 2012
|
|
5899 NSEQ 2
|
|
5900 EFFN 2.000000
|
|
5901 CKSUM 1810826480
|
|
5902 STATS LOCAL MSV -7.3071 0.72810
|
|
5903 STATS LOCAL VITERBI -8.2380 0.72810
|
|
5904 STATS LOCAL FORWARD -3.8550 0.72810
|
|
5905 HMM A C G T
|
|
5906 m->m m->i m->d i->m i->i d->m d->d
|
|
5907 COMPO 1.23917 1.28915 1.56888 1.48462
|
|
5908 1.38629 1.38629 1.38629 1.38629
|
|
5909 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
5910 1 0.23862 2.84929 2.43386 2.70756 1 - -
|
|
5911 1.38629 1.38629 1.38629 1.38629
|
|
5912 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5913 2 2.81865 0.23582 2.88868 2.35662 2 - -
|
|
5914 1.38629 1.38629 1.38629 1.38629
|
|
5915 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5916 3 0.23862 2.84929 2.43386 2.70756 3 - -
|
|
5917 1.38629 1.38629 1.38629 1.38629
|
|
5918 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5919 4 2.81865 0.23582 2.88868 2.35662 4 - -
|
|
5920 1.38629 1.38629 1.38629 1.38629
|
|
5921 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5922 5 0.23862 2.84929 2.43386 2.70756 5 - -
|
|
5923 1.38629 1.38629 1.38629 1.38629
|
|
5924 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5925 6 2.81865 0.23582 2.88868 2.35662 6 - -
|
|
5926 1.38629 1.38629 1.38629 1.38629
|
|
5927 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5928 7 2.57915 2.25909 2.64442 0.28946 7 - -
|
|
5929 1.38629 1.38629 1.38629 1.38629
|
|
5930 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5931 8 2.53331 3.02441 0.20344 2.88069 8 - -
|
|
5932 1.38629 1.38629 1.38629 1.38629
|
|
5933 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5934 9 2.57915 2.25909 2.64442 0.28946 9 - -
|
|
5935 1.38629 1.38629 1.38629 1.38629
|
|
5936 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5937 10 0.23862 2.84929 2.43386 2.70756 10 - -
|
|
5938 1.38629 1.38629 1.38629 1.38629
|
|
5939 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5940 11 2.81865 0.23582 2.88868 2.35662 11 - -
|
|
5941 1.38629 1.38629 1.38629 1.38629
|
|
5942 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5943 12 0.23862 2.84929 2.43386 2.70756 12 - -
|
|
5944 1.38629 1.38629 1.38629 1.38629
|
|
5945 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5946 13 0.23862 2.84929 2.43386 2.70756 13 - -
|
|
5947 1.38629 1.38629 1.38629 1.38629
|
|
5948 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5949 14 2.57915 2.25909 2.64442 0.28946 14 - -
|
|
5950 1.38629 1.38629 1.38629 1.38629
|
|
5951 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5952 15 2.53331 3.02441 0.20344 2.88069 15 - -
|
|
5953 1.38629 1.38629 1.38629 1.38629
|
|
5954 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5955 16 2.53331 3.02441 0.20344 2.88069 16 - -
|
|
5956 1.38629 1.38629 1.38629 1.38629
|
|
5957 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5958 17 0.23862 2.84929 2.43386 2.70756 17 - -
|
|
5959 1.38629 1.38629 1.38629 1.38629
|
|
5960 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5961 18 2.57915 2.25909 2.64442 0.28946 18 - -
|
|
5962 1.38629 1.38629 1.38629 1.38629
|
|
5963 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5964 19 2.57915 2.25909 2.64442 0.28946 19 - -
|
|
5965 1.38629 1.38629 1.38629 1.38629
|
|
5966 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5967 20 2.57915 2.25909 2.64442 0.28946 20 - -
|
|
5968 1.38629 1.38629 1.38629 1.38629
|
|
5969 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5970 21 2.81865 0.23582 2.88868 2.35662 21 - -
|
|
5971 1.38629 1.38629 1.38629 1.38629
|
|
5972 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5973 22 2.57915 2.25909 2.64442 0.28946 22 - -
|
|
5974 1.38629 1.38629 1.38629 1.38629
|
|
5975 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5976 23 2.81865 0.23582 2.88868 2.35662 23 - -
|
|
5977 1.38629 1.38629 1.38629 1.38629
|
|
5978 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5979 24 2.53331 3.02441 0.20344 2.88069 24 - -
|
|
5980 1.38629 1.38629 1.38629 1.38629
|
|
5981 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5982 25 2.53331 3.02441 0.20344 2.88069 25 - -
|
|
5983 1.38629 1.38629 1.38629 1.38629
|
|
5984 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5985 26 2.81865 0.23582 2.88868 2.35662 26 - -
|
|
5986 1.38629 1.38629 1.38629 1.38629
|
|
5987 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5988 27 2.57915 2.25909 2.64442 0.28946 27 - -
|
|
5989 1.38629 1.38629 1.38629 1.38629
|
|
5990 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5991 28 2.81865 0.23582 2.88868 2.35662 28 - -
|
|
5992 1.38629 1.38629 1.38629 1.38629
|
|
5993 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5994 29 2.81865 0.23582 2.88868 2.35662 29 - -
|
|
5995 1.38629 1.38629 1.38629 1.38629
|
|
5996 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
5997 30 2.81865 0.23582 2.88868 2.35662 30 - -
|
|
5998 1.38629 1.38629 1.38629 1.38629
|
|
5999 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6000 31 0.23862 2.84929 2.43386 2.70756 31 - -
|
|
6001 1.38629 1.38629 1.38629 1.38629
|
|
6002 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6003 32 2.81865 0.23582 2.88868 2.35662 32 - -
|
|
6004 1.38629 1.38629 1.38629 1.38629
|
|
6005 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6006 33 0.23862 2.84929 2.43386 2.70756 33 - -
|
|
6007 1.38629 1.38629 1.38629 1.38629
|
|
6008 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6009 34 2.57915 2.25909 2.64442 0.28946 34 - -
|
|
6010 1.38629 1.38629 1.38629 1.38629
|
|
6011 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6012 35 2.81865 0.23582 2.88868 2.35662 35 - -
|
|
6013 1.38629 1.38629 1.38629 1.38629
|
|
6014 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6015 36 2.53331 3.02441 0.20344 2.88069 36 - -
|
|
6016 1.38629 1.38629 1.38629 1.38629
|
|
6017 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6018 37 0.23862 2.84929 2.43386 2.70756 37 - -
|
|
6019 1.38629 1.38629 1.38629 1.38629
|
|
6020 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6021 38 2.57915 2.25909 2.64442 0.28946 38 - -
|
|
6022 1.38629 1.38629 1.38629 1.38629
|
|
6023 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6024 39 2.53331 3.02441 0.20344 2.88069 39 - -
|
|
6025 1.38629 1.38629 1.38629 1.38629
|
|
6026 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6027 40 0.23862 2.84929 2.43386 2.70756 40 - -
|
|
6028 1.38629 1.38629 1.38629 1.38629
|
|
6029 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6030 41 0.23862 2.84929 2.43386 2.70756 41 - -
|
|
6031 1.38629 1.38629 1.38629 1.38629
|
|
6032 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6033 42 2.53331 3.02441 0.20344 2.88069 42 - -
|
|
6034 1.38629 1.38629 1.38629 1.38629
|
|
6035 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6036 43 0.23862 2.84929 2.43386 2.70756 43 - -
|
|
6037 1.38629 1.38629 1.38629 1.38629
|
|
6038 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6039 44 0.23862 2.84929 2.43386 2.70756 44 - -
|
|
6040 1.38629 1.38629 1.38629 1.38629
|
|
6041 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
6042 45 2.81865 0.23582 2.88868 2.35662 45 - -
|
|
6043 1.38629 1.38629 1.38629 1.38629
|
|
6044 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
6045 //
|
|
6046 HMMER3/b [3.0 | March 2010]
|
|
6047 NAME 4_LSU_Chlorophyta_4_LSU_start_four_long
|
|
6048 LENG 45
|
|
6049 ALPH DNA
|
|
6050 RF no
|
|
6051 CS no
|
|
6052 MAP yes
|
|
6053 DATE Sat Jan 28 01:33:17 2012
|
|
6054 NSEQ 32
|
|
6055 EFFN 3.527344
|
|
6056 CKSUM 2012743755
|
|
6057 STATS LOCAL MSV -7.4497 0.71931
|
|
6058 STATS LOCAL VITERBI -7.6973 0.71931
|
|
6059 STATS LOCAL FORWARD -4.3994 0.71931
|
|
6060 HMM A C G T
|
|
6061 m->m m->i m->d i->m i->i d->m d->d
|
|
6062 COMPO 1.35480 1.36244 1.23357 1.63622
|
|
6063 1.38629 1.38629 1.38629 1.38629
|
|
6064 0.03554 4.04784 4.04784 1.46634 0.26236 0.00000 *
|
|
6065 1 0.93968 1.86458 1.85543 1.21099 1 - -
|
|
6066 1.38629 1.38629 1.38629 1.38629
|
|
6067 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
|
|
6068 2 1.23504 1.09122 1.83280 1.54455 2 - -
|
|
6069 1.38629 1.38629 1.38629 1.38629
|
|
6070 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
|
|
6071 3 2.99121 3.65163 0.11040 3.56302 3 - -
|
|
6072 1.38629 1.38629 1.38629 1.38629
|
|
6073 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
|
|
6074 4 3.50594 0.12185 3.55225 2.88172 4 - -
|
|
6075 1.38629 1.38629 1.38629 1.38629
|
|
6076 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
|
|
6077 5 2.91322 2.09109 2.96826 0.26039 5 - -
|
|
6078 1.38629 1.38629 1.38629 1.38629
|
|
6079 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
|
|
6080 6 2.99121 3.65163 0.11040 3.56302 6 - -
|
|
6081 1.38629 1.38629 1.38629 1.38629
|
|
6082 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
|
|
6083 7 3.50594 0.12185 3.55225 2.88172 7 - -
|
|
6084 1.38629 1.38629 1.38629 1.38629
|
|
6085 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
|
|
6086 8 2.99121 3.65163 0.11040 3.56302 8 - -
|
|
6087 1.38629 1.38629 1.38629 1.38629
|
|
6088 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
|
|
6089 9 0.13381 3.44360 2.84291 3.35134 9 - -
|
|
6090 1.38629 1.38629 1.38629 1.38629
|
|
6091 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
|
|
6092 10 3.15301 2.63604 3.19868 0.16864 10 - -
|
|
6093 1.38629 1.38629 1.38629 1.38629
|
|
6094 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
|
|
6095 11 2.99121 3.65163 0.11040 3.56302 11 - -
|
|
6096 1.38629 1.38629 1.38629 1.38629
|
|
6097 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
|
|
6098 12 3.15301 2.63604 3.19868 0.16864 12 - -
|
|
6099 1.38629 1.38629 1.38629 1.38629
|
|
6100 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
|
|
6101 13 3.50594 0.12185 3.55225 2.88172 13 - -
|
|
6102 1.38629 1.38629 1.38629 1.38629
|
|
6103 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
|
|
6104 14 2.99121 3.65163 0.11040 3.56302 14 - -
|
|
6105 1.38629 1.38629 1.38629 1.38629
|
|
6106 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
|
|
6107 15 3.15301 2.63604 3.19868 0.16864 15 - -
|
|
6108 1.38629 1.38629 1.38629 1.38629
|
|
6109 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
|
|
6110 16 3.50594 0.12185 3.55225 2.88172 16 - -
|
|
6111 1.38629 1.38629 1.38629 1.38629
|
|
6112 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
|
|
6113 17 2.99121 3.65163 0.11040 3.56302 17 - -
|
|
6114 1.38629 1.38629 1.38629 1.38629
|
|
6115 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
|
|
6116 18 2.99121 3.65163 0.11040 3.56302 18 - -
|
|
6117 1.38629 1.38629 1.38629 1.38629
|
|
6118 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
|
|
6119 19 3.50594 0.12185 3.55225 2.88172 19 - -
|
|
6120 1.38629 1.38629 1.38629 1.38629
|
|
6121 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
|
|
6122 20 2.99121 3.65163 0.11040 3.56302 20 - -
|
|
6123 1.38629 1.38629 1.38629 1.38629
|
|
6124 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
|
|
6125 21 0.13381 3.44360 2.84291 3.35134 21 - -
|
|
6126 1.38629 1.38629 1.38629 1.38629
|
|
6127 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
|
|
6128 22 2.99121 3.65163 0.11040 3.56302 22 - -
|
|
6129 1.38629 1.38629 1.38629 1.38629
|
|
6130 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
|
|
6131 23 2.99121 3.65163 0.11040 3.56302 23 - -
|
|
6132 1.38629 1.38629 1.38629 1.38629
|
|
6133 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
|
|
6134 24 0.13381 3.44360 2.84291 3.35134 24 - -
|
|
6135 1.38629 1.38629 1.38629 1.38629
|
|
6136 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
|
|
6137 25 0.13381 3.44360 2.84291 3.35134 25 - -
|
|
6138 1.38629 1.38629 1.38629 1.38629
|
|
6139 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
|
|
6140 26 0.13381 3.44360 2.84291 3.35134 26 - -
|
|
6141 1.38629 1.38629 1.38629 1.38629
|
|
6142 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
|
|
6143 27 3.50594 0.12185 3.55225 2.88172 27 - -
|
|
6144 1.38629 1.38629 1.38629 1.38629
|
|
6145 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
|
|
6146 28 3.50594 0.12185 3.55225 2.88172 28 - -
|
|
6147 1.38629 1.38629 1.38629 1.38629
|
|
6148 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
|
|
6149 29 3.50594 0.12185 3.55225 2.88172 29 - -
|
|
6150 1.38629 1.38629 1.38629 1.38629
|
|
6151 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
|
|
6152 30 2.99121 3.65163 0.11040 3.56302 30 - -
|
|
6153 1.38629 1.38629 1.38629 1.38629
|
|
6154 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
|
|
6155 31 3.50594 0.12185 3.55225 2.88172 31 - -
|
|
6156 1.38629 1.38629 1.38629 1.38629
|
|
6157 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
|
|
6158 32 3.15301 2.63604 3.19868 0.16864 32 - -
|
|
6159 1.38629 1.38629 1.38629 1.38629
|
|
6160 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
|
|
6161 33 2.99121 3.65163 0.11040 3.56302 33 - -
|
|
6162 1.38629 1.38629 1.38629 1.38629
|
|
6163 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
|
|
6164 34 0.13381 3.44360 2.84291 3.35134 34 - -
|
|
6165 1.38629 1.38629 1.38629 1.38629
|
|
6166 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
|
|
6167 35 0.13381 3.44360 2.84291 3.35134 35 - -
|
|
6168 1.38629 1.38629 1.38629 1.38629
|
|
6169 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
|
|
6170 36 3.50594 0.12185 3.55225 2.88172 36 - -
|
|
6171 1.38629 1.38629 1.38629 1.38629
|
|
6172 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
|
|
6173 37 3.15301 2.63604 3.19868 0.16864 37 - -
|
|
6174 1.38629 1.38629 1.38629 1.38629
|
|
6175 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
|
|
6176 38 3.15301 2.63604 3.19868 0.16864 38 - -
|
|
6177 1.38629 1.38629 1.38629 1.38629
|
|
6178 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
|
|
6179 39 0.13381 3.44360 2.84291 3.35134 39 - -
|
|
6180 1.38629 1.38629 1.38629 1.38629
|
|
6181 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
|
|
6182 40 0.13381 3.44360 2.84291 3.35134 40 - -
|
|
6183 1.38629 1.38629 1.38629 1.38629
|
|
6184 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
|
|
6185 41 2.99121 3.65163 0.11040 3.56302 41 - -
|
|
6186 1.38629 1.38629 1.38629 1.38629
|
|
6187 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
|
|
6188 42 3.50594 0.12185 3.55225 2.88172 42 - -
|
|
6189 1.38629 1.38629 1.38629 1.38629
|
|
6190 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
|
|
6191 43 0.13381 3.44360 2.84291 3.35134 43 - -
|
|
6192 1.38629 1.38629 1.38629 1.38629
|
|
6193 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
|
|
6194 44 3.15301 2.63604 3.19868 0.16864 44 - -
|
|
6195 1.38629 1.38629 1.38629 1.38629
|
|
6196 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
|
|
6197 45 0.13381 3.44360 2.84291 3.35134 45 - -
|
|
6198 1.38629 1.38629 1.38629 1.38629
|
|
6199 0.01793 4.03022 * 1.46634 0.26236 0.00000 *
|
|
6200 //
|
|
6201 HMMER3/b [3.0 | March 2010]
|
|
6202 NAME 4_LSU_Chlorophyta_4_LSU_start_onea_long
|
|
6203 LENG 45
|
|
6204 ALPH DNA
|
|
6205 RF no
|
|
6206 CS no
|
|
6207 MAP yes
|
|
6208 DATE Sat Jan 28 01:32:03 2012
|
|
6209 NSEQ 11
|
|
6210 EFFN 3.601318
|
|
6211 CKSUM 379381944
|
|
6212 STATS LOCAL MSV -7.4834 0.71933
|
|
6213 STATS LOCAL VITERBI -7.5869 0.71933
|
|
6214 STATS LOCAL FORWARD -3.9658 0.71933
|
|
6215 HMM A C G T
|
|
6216 m->m m->i m->d i->m i->i d->m d->d
|
|
6217 COMPO 1.30893 1.27801 1.46843 1.50954
|
|
6218 1.38629 1.38629 1.38629 1.38629
|
|
6219 0.03508 4.06067 4.06067 1.46634 0.26236 0.00000 *
|
|
6220 1 1.44401 2.22516 2.33571 0.58119 1 - -
|
|
6221 1.38629 1.38629 1.38629 1.38629
|
|
6222 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
|
|
6223 2 3.17545 2.65027 3.22025 0.16529 2 - -
|
|
6224 1.38629 1.38629 1.38629 1.38629
|
|
6225 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
|
|
6226 3 3.17545 2.65027 3.22025 0.16529 3 - -
|
|
6227 1.38629 1.38629 1.38629 1.38629
|
|
6228 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
|
|
6229 4 3.53099 0.11912 3.57619 2.89972 4 - -
|
|
6230 1.38629 1.38629 1.38629 1.38629
|
|
6231 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
|
|
6232 5 3.00607 3.67347 0.10820 3.58721 5 - -
|
|
6233 1.38629 1.38629 1.38629 1.38629
|
|
6234 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
|
|
6235 6 0.13114 3.46546 2.85699 3.37531 6 - -
|
|
6236 1.38629 1.38629 1.38629 1.38629
|
|
6237 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
|
|
6238 7 3.53099 0.11912 3.57619 2.89972 7 - -
|
|
6239 1.38629 1.38629 1.38629 1.38629
|
|
6240 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
|
|
6241 8 3.53099 0.11912 3.57619 2.89972 8 - -
|
|
6242 1.38629 1.38629 1.38629 1.38629
|
|
6243 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
|
|
6244 9 3.17545 2.65027 3.22025 0.16529 9 - -
|
|
6245 1.38629 1.38629 1.38629 1.38629
|
|
6246 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
|
|
6247 10 3.00607 3.67347 0.10820 3.58721 10 - -
|
|
6248 1.38629 1.38629 1.38629 1.38629
|
|
6249 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
|
|
6250 11 0.13114 3.46546 2.85699 3.37531 11 - -
|
|
6251 1.38629 1.38629 1.38629 1.38629
|
|
6252 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
|
|
6253 12 3.00607 3.67347 0.10820 3.58721 12 - -
|
|
6254 1.38629 1.38629 1.38629 1.38629
|
|
6255 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
|
|
6256 13 3.53099 0.11912 3.57619 2.89972 13 - -
|
|
6257 1.38629 1.38629 1.38629 1.38629
|
|
6258 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
|
|
6259 14 3.17545 2.65027 3.22025 0.16529 14 - -
|
|
6260 1.38629 1.38629 1.38629 1.38629
|
|
6261 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
|
|
6262 15 3.53099 0.11912 3.57619 2.89972 15 - -
|
|
6263 1.38629 1.38629 1.38629 1.38629
|
|
6264 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
|
|
6265 16 0.13114 3.46546 2.85699 3.37531 16 - -
|
|
6266 1.38629 1.38629 1.38629 1.38629
|
|
6267 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
|
|
6268 17 3.00607 3.67347 0.10820 3.58721 17 - -
|
|
6269 1.38629 1.38629 1.38629 1.38629
|
|
6270 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
|
|
6271 18 3.00607 3.67347 0.10820 3.58721 18 - -
|
|
6272 1.38629 1.38629 1.38629 1.38629
|
|
6273 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
|
|
6274 19 3.53099 0.11912 3.57619 2.89972 19 - -
|
|
6275 1.38629 1.38629 1.38629 1.38629
|
|
6276 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
|
|
6277 20 0.13114 3.46546 2.85699 3.37531 20 - -
|
|
6278 1.38629 1.38629 1.38629 1.38629
|
|
6279 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
|
|
6280 21 0.13114 3.46546 2.85699 3.37531 21 - -
|
|
6281 1.38629 1.38629 1.38629 1.38629
|
|
6282 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
|
|
6283 22 3.00607 3.67347 0.10820 3.58721 22 - -
|
|
6284 1.38629 1.38629 1.38629 1.38629
|
|
6285 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
|
|
6286 23 1.55854 2.81955 0.41310 2.68348 23 - -
|
|
6287 1.38629 1.38629 1.38629 1.38629
|
|
6288 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
|
|
6289 24 2.52166 0.63298 2.59319 1.15872 24 - -
|
|
6290 1.38629 1.38629 1.38629 1.38629
|
|
6291 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
|
|
6292 25 2.93139 2.09214 2.98594 0.25778 25 - -
|
|
6293 1.38629 1.38629 1.38629 1.38629
|
|
6294 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
|
|
6295 26 0.13114 3.46546 2.85699 3.37531 26 - -
|
|
6296 1.38629 1.38629 1.38629 1.38629
|
|
6297 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
|
|
6298 27 3.53099 0.11912 3.57619 2.89972 27 - -
|
|
6299 1.38629 1.38629 1.38629 1.38629
|
|
6300 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
|
|
6301 28 3.53099 0.11912 3.57619 2.89972 28 - -
|
|
6302 1.38629 1.38629 1.38629 1.38629
|
|
6303 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
|
|
6304 29 3.53099 0.11912 3.57619 2.89972 29 - -
|
|
6305 1.38629 1.38629 1.38629 1.38629
|
|
6306 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
|
|
6307 30 3.00607 3.67347 0.10820 3.58721 30 - -
|
|
6308 1.38629 1.38629 1.38629 1.38629
|
|
6309 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
|
|
6310 31 3.53099 0.11912 3.57619 2.89972 31 - -
|
|
6311 1.38629 1.38629 1.38629 1.38629
|
|
6312 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
|
|
6313 32 3.17545 2.65027 3.22025 0.16529 32 - -
|
|
6314 1.38629 1.38629 1.38629 1.38629
|
|
6315 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
|
|
6316 33 3.00607 3.67347 0.10820 3.58721 33 - -
|
|
6317 1.38629 1.38629 1.38629 1.38629
|
|
6318 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
|
|
6319 34 0.13114 3.46546 2.85699 3.37531 34 - -
|
|
6320 1.38629 1.38629 1.38629 1.38629
|
|
6321 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
|
|
6322 35 0.13114 3.46546 2.85699 3.37531 35 - -
|
|
6323 1.38629 1.38629 1.38629 1.38629
|
|
6324 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
|
|
6325 36 3.53099 0.11912 3.57619 2.89972 36 - -
|
|
6326 1.38629 1.38629 1.38629 1.38629
|
|
6327 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
|
|
6328 37 3.17545 2.65027 3.22025 0.16529 37 - -
|
|
6329 1.38629 1.38629 1.38629 1.38629
|
|
6330 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
|
|
6331 38 3.17545 2.65027 3.22025 0.16529 38 - -
|
|
6332 1.38629 1.38629 1.38629 1.38629
|
|
6333 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
|
|
6334 39 0.13114 3.46546 2.85699 3.37531 39 - -
|
|
6335 1.38629 1.38629 1.38629 1.38629
|
|
6336 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
|
|
6337 40 0.13114 3.46546 2.85699 3.37531 40 - -
|
|
6338 1.38629 1.38629 1.38629 1.38629
|
|
6339 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
|
|
6340 41 3.00607 3.67347 0.10820 3.58721 41 - -
|
|
6341 1.38629 1.38629 1.38629 1.38629
|
|
6342 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
|
|
6343 42 3.53099 0.11912 3.57619 2.89972 42 - -
|
|
6344 1.38629 1.38629 1.38629 1.38629
|
|
6345 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
|
|
6346 43 0.13114 3.46546 2.85699 3.37531 43 - -
|
|
6347 1.38629 1.38629 1.38629 1.38629
|
|
6348 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
|
|
6349 44 3.17545 2.65027 3.22025 0.16529 44 - -
|
|
6350 1.38629 1.38629 1.38629 1.38629
|
|
6351 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
|
|
6352 45 0.13114 3.46546 2.85699 3.37531 45 - -
|
|
6353 1.38629 1.38629 1.38629 1.38629
|
|
6354 0.01770 4.04328 * 1.46634 0.26236 0.00000 *
|
|
6355 //
|
|
6356 HMMER3/b [3.0 | March 2010]
|
|
6357 NAME 4_LSU_Chlorophyta_4_LSU_start_oneb_long
|
|
6358 LENG 45
|
|
6359 ALPH DNA
|
|
6360 RF no
|
|
6361 CS no
|
|
6362 MAP yes
|
|
6363 DATE Sat Jan 28 01:32:09 2012
|
|
6364 NSEQ 3
|
|
6365 EFFN 3.000000
|
|
6366 CKSUM 3141584239
|
|
6367 STATS LOCAL MSV -7.9640 0.72014
|
|
6368 STATS LOCAL VITERBI -7.7831 0.72014
|
|
6369 STATS LOCAL FORWARD -3.8589 0.72014
|
|
6370 HMM A C G T
|
|
6371 m->m m->i m->d i->m i->i d->m d->d
|
|
6372 COMPO 1.22757 1.15795 1.60695 1.64834
|
|
6373 1.38629 1.38629 1.38629 1.38629
|
|
6374 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
|
|
6375 1 2.97980 2.52563 3.03204 0.19727 1 - -
|
|
6376 1.38629 1.38629 1.38629 1.38629
|
|
6377 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6378 2 3.30705 0.14631 3.36166 2.73626 2 - -
|
|
6379 1.38629 1.38629 1.38629 1.38629
|
|
6380 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6381 3 2.97980 2.52563 3.03204 0.19727 3 - -
|
|
6382 1.38629 1.38629 1.38629 1.38629
|
|
6383 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6384 4 3.30705 0.14631 3.36166 2.73626 4 - -
|
|
6385 1.38629 1.38629 1.38629 1.38629
|
|
6386 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6387 5 2.86982 3.47591 0.13017 3.36931 5 - -
|
|
6388 1.38629 1.38629 1.38629 1.38629
|
|
6389 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6390 6 0.15719 3.27118 2.73043 3.16274 6 - -
|
|
6391 1.38629 1.38629 1.38629 1.38629
|
|
6392 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6393 7 3.30705 0.14631 3.36166 2.73626 7 - -
|
|
6394 1.38629 1.38629 1.38629 1.38629
|
|
6395 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6396 8 3.30705 0.14631 3.36166 2.73626 8 - -
|
|
6397 1.38629 1.38629 1.38629 1.38629
|
|
6398 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6399 9 2.97980 2.52563 3.03204 0.19727 9 - -
|
|
6400 1.38629 1.38629 1.38629 1.38629
|
|
6401 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6402 10 2.86982 3.47591 0.13017 3.36931 10 - -
|
|
6403 1.38629 1.38629 1.38629 1.38629
|
|
6404 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6405 11 0.15719 3.27118 2.73043 3.16274 11 - -
|
|
6406 1.38629 1.38629 1.38629 1.38629
|
|
6407 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6408 12 2.86982 3.47591 0.13017 3.36931 12 - -
|
|
6409 1.38629 1.38629 1.38629 1.38629
|
|
6410 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6411 13 3.30705 0.14631 3.36166 2.73626 13 - -
|
|
6412 1.38629 1.38629 1.38629 1.38629
|
|
6413 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6414 14 2.97980 2.52563 3.03204 0.19727 14 - -
|
|
6415 1.38629 1.38629 1.38629 1.38629
|
|
6416 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6417 15 3.30705 0.14631 3.36166 2.73626 15 - -
|
|
6418 1.38629 1.38629 1.38629 1.38629
|
|
6419 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6420 16 0.15719 3.27118 2.73043 3.16274 16 - -
|
|
6421 1.38629 1.38629 1.38629 1.38629
|
|
6422 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6423 17 0.15719 3.27118 2.73043 3.16274 17 - -
|
|
6424 1.38629 1.38629 1.38629 1.38629
|
|
6425 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6426 18 2.86982 3.47591 0.13017 3.36931 18 - -
|
|
6427 1.38629 1.38629 1.38629 1.38629
|
|
6428 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6429 19 3.30705 0.14631 3.36166 2.73626 19 - -
|
|
6430 1.38629 1.38629 1.38629 1.38629
|
|
6431 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6432 20 0.15719 3.27118 2.73043 3.16274 20 - -
|
|
6433 1.38629 1.38629 1.38629 1.38629
|
|
6434 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6435 21 0.15719 3.27118 2.73043 3.16274 21 - -
|
|
6436 1.38629 1.38629 1.38629 1.38629
|
|
6437 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6438 22 2.86982 3.47591 0.13017 3.36931 22 - -
|
|
6439 1.38629 1.38629 1.38629 1.38629
|
|
6440 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6441 23 0.15719 3.27118 2.73043 3.16274 23 - -
|
|
6442 1.38629 1.38629 1.38629 1.38629
|
|
6443 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6444 24 3.30705 0.14631 3.36166 2.73626 24 - -
|
|
6445 1.38629 1.38629 1.38629 1.38629
|
|
6446 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6447 25 3.30705 0.14631 3.36166 2.73626 25 - -
|
|
6448 1.38629 1.38629 1.38629 1.38629
|
|
6449 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6450 26 0.15719 3.27118 2.73043 3.16274 26 - -
|
|
6451 1.38629 1.38629 1.38629 1.38629
|
|
6452 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6453 27 3.30705 0.14631 3.36166 2.73626 27 - -
|
|
6454 1.38629 1.38629 1.38629 1.38629
|
|
6455 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6456 28 3.30705 0.14631 3.36166 2.73626 28 - -
|
|
6457 1.38629 1.38629 1.38629 1.38629
|
|
6458 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6459 29 3.30705 0.14631 3.36166 2.73626 29 - -
|
|
6460 1.38629 1.38629 1.38629 1.38629
|
|
6461 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6462 30 2.86982 3.47591 0.13017 3.36931 30 - -
|
|
6463 1.38629 1.38629 1.38629 1.38629
|
|
6464 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6465 31 3.30705 0.14631 3.36166 2.73626 31 - -
|
|
6466 1.38629 1.38629 1.38629 1.38629
|
|
6467 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6468 32 2.97980 2.52563 3.03204 0.19727 32 - -
|
|
6469 1.38629 1.38629 1.38629 1.38629
|
|
6470 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6471 33 2.86982 3.47591 0.13017 3.36931 33 - -
|
|
6472 1.38629 1.38629 1.38629 1.38629
|
|
6473 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6474 34 0.15719 3.27118 2.73043 3.16274 34 - -
|
|
6475 1.38629 1.38629 1.38629 1.38629
|
|
6476 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6477 35 0.15719 3.27118 2.73043 3.16274 35 - -
|
|
6478 1.38629 1.38629 1.38629 1.38629
|
|
6479 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6480 36 3.30705 0.14631 3.36166 2.73626 36 - -
|
|
6481 1.38629 1.38629 1.38629 1.38629
|
|
6482 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6483 37 2.97980 2.52563 3.03204 0.19727 37 - -
|
|
6484 1.38629 1.38629 1.38629 1.38629
|
|
6485 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6486 38 2.97980 2.52563 3.03204 0.19727 38 - -
|
|
6487 1.38629 1.38629 1.38629 1.38629
|
|
6488 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6489 39 0.15719 3.27118 2.73043 3.16274 39 - -
|
|
6490 1.38629 1.38629 1.38629 1.38629
|
|
6491 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6492 40 0.15719 3.27118 2.73043 3.16274 40 - -
|
|
6493 1.38629 1.38629 1.38629 1.38629
|
|
6494 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6495 41 2.86982 3.47591 0.13017 3.36931 41 - -
|
|
6496 1.38629 1.38629 1.38629 1.38629
|
|
6497 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6498 42 3.30705 0.14631 3.36166 2.73626 42 - -
|
|
6499 1.38629 1.38629 1.38629 1.38629
|
|
6500 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6501 43 0.15719 3.27118 2.73043 3.16274 43 - -
|
|
6502 1.38629 1.38629 1.38629 1.38629
|
|
6503 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6504 44 2.97980 2.52563 3.03204 0.19727 44 - -
|
|
6505 1.38629 1.38629 1.38629 1.38629
|
|
6506 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6507 45 0.15719 3.27118 2.73043 3.16274 45 - -
|
|
6508 1.38629 1.38629 1.38629 1.38629
|
|
6509 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
|
|
6510 //
|
|
6511 HMMER3/b [3.0 | March 2010]
|
|
6512 NAME 4_LSU_Chlorophyta_4_LSU_start_onec_long
|
|
6513 LENG 45
|
|
6514 ALPH DNA
|
|
6515 RF no
|
|
6516 CS no
|
|
6517 MAP yes
|
|
6518 DATE Sat Jan 28 01:32:18 2012
|
|
6519 NSEQ 6
|
|
6520 EFFN 3.307617
|
|
6521 CKSUM 3682386209
|
|
6522 STATS LOCAL MSV -8.0356 0.71933
|
|
6523 STATS LOCAL VITERBI -7.8157 0.71933
|
|
6524 STATS LOCAL FORWARD -4.1473 0.71933
|
|
6525 HMM A C G T
|
|
6526 m->m m->i m->d i->m i->i d->m d->d
|
|
6527 COMPO 1.27479 1.35672 1.37691 1.55755
|
|
6528 1.38629 1.38629 1.38629 1.38629
|
|
6529 0.03699 4.00872 4.00872 1.46634 0.26236 0.00000 *
|
|
6530 1 3.08373 2.59204 3.13207 0.17946 1 - -
|
|
6531 1.38629 1.38629 1.38629 1.38629
|
|
6532 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
|
|
6533 2 3.08373 2.59204 3.13207 0.17946 2 - -
|
|
6534 1.38629 1.38629 1.38629 1.38629
|
|
6535 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
|
|
6536 3 3.08373 2.59204 3.13207 0.17946 3 - -
|
|
6537 1.38629 1.38629 1.38629 1.38629
|
|
6538 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
|
|
6539 4 3.42754 0.13087 3.47723 2.82494 4 - -
|
|
6540 1.38629 1.38629 1.38629 1.38629
|
|
6541 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
|
|
6542 5 2.94415 3.58285 0.11770 3.48701 5 - -
|
|
6543 1.38629 1.38629 1.38629 1.38629
|
|
6544 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
|
|
6545 6 0.14253 3.37543 2.79878 3.27663 6 - -
|
|
6546 1.38629 1.38629 1.38629 1.38629
|
|
6547 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
|
|
6548 7 3.42754 0.13087 3.47723 2.82494 7 - -
|
|
6549 1.38629 1.38629 1.38629 1.38629
|
|
6550 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
|
|
6551 8 3.42754 0.13087 3.47723 2.82494 8 - -
|
|
6552 1.38629 1.38629 1.38629 1.38629
|
|
6553 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
|
|
6554 9 3.08373 2.59204 3.13207 0.17946 9 - -
|
|
6555 1.38629 1.38629 1.38629 1.38629
|
|
6556 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
|
|
6557 10 2.94415 3.58285 0.11770 3.48701 10 - -
|
|
6558 1.38629 1.38629 1.38629 1.38629
|
|
6559 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
|
|
6560 11 0.14253 3.37543 2.79878 3.27663 11 - -
|
|
6561 1.38629 1.38629 1.38629 1.38629
|
|
6562 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
|
|
6563 12 2.94415 3.58285 0.11770 3.48701 12 - -
|
|
6564 1.38629 1.38629 1.38629 1.38629
|
|
6565 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
|
|
6566 13 3.42754 0.13087 3.47723 2.82494 13 - -
|
|
6567 1.38629 1.38629 1.38629 1.38629
|
|
6568 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
|
|
6569 14 3.08373 2.59204 3.13207 0.17946 14 - -
|
|
6570 1.38629 1.38629 1.38629 1.38629
|
|
6571 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
|
|
6572 15 3.42754 0.13087 3.47723 2.82494 15 - -
|
|
6573 1.38629 1.38629 1.38629 1.38629
|
|
6574 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
|
|
6575 16 0.14253 3.37543 2.79878 3.27663 16 - -
|
|
6576 1.38629 1.38629 1.38629 1.38629
|
|
6577 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
|
|
6578 17 2.94415 3.58285 0.11770 3.48701 17 - -
|
|
6579 1.38629 1.38629 1.38629 1.38629
|
|
6580 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
|
|
6581 18 2.94415 3.58285 0.11770 3.48701 18 - -
|
|
6582 1.38629 1.38629 1.38629 1.38629
|
|
6583 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
|
|
6584 19 2.94415 3.58285 0.11770 3.48701 19 - -
|
|
6585 1.38629 1.38629 1.38629 1.38629
|
|
6586 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
|
|
6587 20 2.94415 3.58285 0.11770 3.48701 20 - -
|
|
6588 1.38629 1.38629 1.38629 1.38629
|
|
6589 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
|
|
6590 21 0.14253 3.37543 2.79878 3.27663 21 - -
|
|
6591 1.38629 1.38629 1.38629 1.38629
|
|
6592 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
|
|
6593 22 2.94415 3.58285 0.11770 3.48701 22 - -
|
|
6594 1.38629 1.38629 1.38629 1.38629
|
|
6595 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
|
|
6596 23 0.14253 3.37543 2.79878 3.27663 23 - -
|
|
6597 1.38629 1.38629 1.38629 1.38629
|
|
6598 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
|
|
6599 24 0.14253 3.37543 2.79878 3.27663 24 - -
|
|
6600 1.38629 1.38629 1.38629 1.38629
|
|
6601 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
|
|
6602 25 3.42754 0.13087 3.47723 2.82494 25 - -
|
|
6603 1.38629 1.38629 1.38629 1.38629
|
|
6604 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
|
|
6605 26 0.14253 3.37543 2.79878 3.27663 26 - -
|
|
6606 1.38629 1.38629 1.38629 1.38629
|
|
6607 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
|
|
6608 27 3.42754 0.13087 3.47723 2.82494 27 - -
|
|
6609 1.38629 1.38629 1.38629 1.38629
|
|
6610 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
|
|
6611 28 3.42754 0.13087 3.47723 2.82494 28 - -
|
|
6612 1.38629 1.38629 1.38629 1.38629
|
|
6613 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
|
|
6614 29 3.42754 0.13087 3.47723 2.82494 29 - -
|
|
6615 1.38629 1.38629 1.38629 1.38629
|
|
6616 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
|
|
6617 30 2.94415 3.58285 0.11770 3.48701 30 - -
|
|
6618 1.38629 1.38629 1.38629 1.38629
|
|
6619 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
|
|
6620 31 2.49371 0.60220 2.56569 1.22784 31 - -
|
|
6621 1.38629 1.38629 1.38629 1.38629
|
|
6622 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
|
|
6623 32 3.08373 2.59204 3.13207 0.17946 32 - -
|
|
6624 1.38629 1.38629 1.38629 1.38629
|
|
6625 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
|
|
6626 33 2.94415 3.58285 0.11770 3.48701 33 - -
|
|
6627 1.38629 1.38629 1.38629 1.38629
|
|
6628 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
|
|
6629 34 0.14253 3.37543 2.79878 3.27663 34 - -
|
|
6630 1.38629 1.38629 1.38629 1.38629
|
|
6631 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
|
|
6632 35 0.14253 3.37543 2.79878 3.27663 35 - -
|
|
6633 1.38629 1.38629 1.38629 1.38629
|
|
6634 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
|
|
6635 36 3.42754 0.13087 3.47723 2.82494 36 - -
|
|
6636 1.38629 1.38629 1.38629 1.38629
|
|
6637 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
|
|
6638 37 3.08373 2.59204 3.13207 0.17946 37 - -
|
|
6639 1.38629 1.38629 1.38629 1.38629
|
|
6640 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
|
|
6641 38 3.08373 2.59204 3.13207 0.17946 38 - -
|
|
6642 1.38629 1.38629 1.38629 1.38629
|
|
6643 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
|
|
6644 39 0.14253 3.37543 2.79878 3.27663 39 - -
|
|
6645 1.38629 1.38629 1.38629 1.38629
|
|
6646 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
|
|
6647 40 0.14253 3.37543 2.79878 3.27663 40 - -
|
|
6648 1.38629 1.38629 1.38629 1.38629
|
|
6649 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
|
|
6650 41 2.94415 3.58285 0.11770 3.48701 41 - -
|
|
6651 1.38629 1.38629 1.38629 1.38629
|
|
6652 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
|
|
6653 42 3.42754 0.13087 3.47723 2.82494 42 - -
|
|
6654 1.38629 1.38629 1.38629 1.38629
|
|
6655 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
|
|
6656 43 0.14253 3.37543 2.79878 3.27663 43 - -
|
|
6657 1.38629 1.38629 1.38629 1.38629
|
|
6658 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
|
|
6659 44 3.08373 2.59204 3.13207 0.17946 44 - -
|
|
6660 1.38629 1.38629 1.38629 1.38629
|
|
6661 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
|
|
6662 45 0.14253 3.37543 2.79878 3.27663 45 - -
|
|
6663 1.38629 1.38629 1.38629 1.38629
|
|
6664 0.01867 3.99039 * 1.46634 0.26236 0.00000 *
|
|
6665 //
|
|
6666 HMMER3/b [3.0 | March 2010]
|
|
6667 NAME 4_LSU_Chlorophyta_4_LSU_start_oned_long
|
|
6668 LENG 45
|
|
6669 ALPH DNA
|
|
6670 RF no
|
|
6671 CS no
|
|
6672 MAP yes
|
|
6673 DATE Sat Jan 28 01:32:27 2012
|
|
6674 NSEQ 3
|
|
6675 EFFN 3.000000
|
|
6676 CKSUM 3310277996
|
|
6677 STATS LOCAL MSV -8.0340 0.72071
|
|
6678 STATS LOCAL VITERBI -7.7803 0.72071
|
|
6679 STATS LOCAL FORWARD -3.9164 0.72071
|
|
6680 HMM A C G T
|
|
6681 m->m m->i m->d i->m i->i d->m d->d
|
|
6682 COMPO 1.21928 1.29810 1.50316 1.56504
|
|
6683 1.38629 1.38629 1.38629 1.38629
|
|
6684 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
|
|
6685 1 2.97980 2.52563 3.03204 0.19727 1 - -
|
|
6686 1.38629 1.38629 1.38629 1.38629
|
|
6687 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6688 2 2.97980 2.52563 3.03204 0.19727 2 - -
|
|
6689 1.38629 1.38629 1.38629 1.38629
|
|
6690 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6691 3 2.97980 2.52563 3.03204 0.19727 3 - -
|
|
6692 1.38629 1.38629 1.38629 1.38629
|
|
6693 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6694 4 3.30705 0.14631 3.36166 2.73626 4 - -
|
|
6695 1.38629 1.38629 1.38629 1.38629
|
|
6696 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6697 5 2.86982 3.47591 0.13017 3.36931 5 - -
|
|
6698 1.38629 1.38629 1.38629 1.38629
|
|
6699 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6700 6 0.15719 3.27118 2.73043 3.16274 6 - -
|
|
6701 1.38629 1.38629 1.38629 1.38629
|
|
6702 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6703 7 3.30705 0.14631 3.36166 2.73626 7 - -
|
|
6704 1.38629 1.38629 1.38629 1.38629
|
|
6705 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6706 8 3.30705 0.14631 3.36166 2.73626 8 - -
|
|
6707 1.38629 1.38629 1.38629 1.38629
|
|
6708 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6709 9 2.97980 2.52563 3.03204 0.19727 9 - -
|
|
6710 1.38629 1.38629 1.38629 1.38629
|
|
6711 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6712 10 2.86982 3.47591 0.13017 3.36931 10 - -
|
|
6713 1.38629 1.38629 1.38629 1.38629
|
|
6714 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6715 11 0.15719 3.27118 2.73043 3.16274 11 - -
|
|
6716 1.38629 1.38629 1.38629 1.38629
|
|
6717 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6718 12 2.86982 3.47591 0.13017 3.36931 12 - -
|
|
6719 1.38629 1.38629 1.38629 1.38629
|
|
6720 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6721 13 2.10839 0.71588 1.38236 1.97456 13 - -
|
|
6722 1.38629 1.38629 1.38629 1.38629
|
|
6723 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6724 14 2.97980 2.52563 3.03204 0.19727 14 - -
|
|
6725 1.38629 1.38629 1.38629 1.38629
|
|
6726 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6727 15 3.30705 0.14631 3.36166 2.73626 15 - -
|
|
6728 1.38629 1.38629 1.38629 1.38629
|
|
6729 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6730 16 0.15719 3.27118 2.73043 3.16274 16 - -
|
|
6731 1.38629 1.38629 1.38629 1.38629
|
|
6732 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6733 17 2.86982 3.47591 0.13017 3.36931 17 - -
|
|
6734 1.38629 1.38629 1.38629 1.38629
|
|
6735 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6736 18 2.86982 3.47591 0.13017 3.36931 18 - -
|
|
6737 1.38629 1.38629 1.38629 1.38629
|
|
6738 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6739 19 3.30705 0.14631 3.36166 2.73626 19 - -
|
|
6740 1.38629 1.38629 1.38629 1.38629
|
|
6741 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6742 20 0.15719 3.27118 2.73043 3.16274 20 - -
|
|
6743 1.38629 1.38629 1.38629 1.38629
|
|
6744 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6745 21 0.15719 3.27118 2.73043 3.16274 21 - -
|
|
6746 1.38629 1.38629 1.38629 1.38629
|
|
6747 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6748 22 2.86982 3.47591 0.13017 3.36931 22 - -
|
|
6749 1.38629 1.38629 1.38629 1.38629
|
|
6750 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6751 23 0.15719 3.27118 2.73043 3.16274 23 - -
|
|
6752 1.38629 1.38629 1.38629 1.38629
|
|
6753 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6754 24 0.15719 3.27118 2.73043 3.16274 24 - -
|
|
6755 1.38629 1.38629 1.38629 1.38629
|
|
6756 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6757 25 3.30705 0.14631 3.36166 2.73626 25 - -
|
|
6758 1.38629 1.38629 1.38629 1.38629
|
|
6759 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6760 26 0.15719 3.27118 2.73043 3.16274 26 - -
|
|
6761 1.38629 1.38629 1.38629 1.38629
|
|
6762 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6763 27 3.30705 0.14631 3.36166 2.73626 27 - -
|
|
6764 1.38629 1.38629 1.38629 1.38629
|
|
6765 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6766 28 3.30705 0.14631 3.36166 2.73626 28 - -
|
|
6767 1.38629 1.38629 1.38629 1.38629
|
|
6768 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6769 29 3.30705 0.14631 3.36166 2.73626 29 - -
|
|
6770 1.38629 1.38629 1.38629 1.38629
|
|
6771 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6772 30 2.86982 3.47591 0.13017 3.36931 30 - -
|
|
6773 1.38629 1.38629 1.38629 1.38629
|
|
6774 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6775 31 3.30705 0.14631 3.36166 2.73626 31 - -
|
|
6776 1.38629 1.38629 1.38629 1.38629
|
|
6777 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6778 32 2.97980 2.52563 3.03204 0.19727 32 - -
|
|
6779 1.38629 1.38629 1.38629 1.38629
|
|
6780 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6781 33 2.86982 3.47591 0.13017 3.36931 33 - -
|
|
6782 1.38629 1.38629 1.38629 1.38629
|
|
6783 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6784 34 0.15719 3.27118 2.73043 3.16274 34 - -
|
|
6785 1.38629 1.38629 1.38629 1.38629
|
|
6786 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6787 35 0.15719 3.27118 2.73043 3.16274 35 - -
|
|
6788 1.38629 1.38629 1.38629 1.38629
|
|
6789 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6790 36 3.30705 0.14631 3.36166 2.73626 36 - -
|
|
6791 1.38629 1.38629 1.38629 1.38629
|
|
6792 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6793 37 2.97980 2.52563 3.03204 0.19727 37 - -
|
|
6794 1.38629 1.38629 1.38629 1.38629
|
|
6795 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6796 38 2.97980 2.52563 3.03204 0.19727 38 - -
|
|
6797 1.38629 1.38629 1.38629 1.38629
|
|
6798 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6799 39 0.15719 3.27118 2.73043 3.16274 39 - -
|
|
6800 1.38629 1.38629 1.38629 1.38629
|
|
6801 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6802 40 0.15719 3.27118 2.73043 3.16274 40 - -
|
|
6803 1.38629 1.38629 1.38629 1.38629
|
|
6804 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6805 41 2.86982 3.47591 0.13017 3.36931 41 - -
|
|
6806 1.38629 1.38629 1.38629 1.38629
|
|
6807 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6808 42 3.30705 0.14631 3.36166 2.73626 42 - -
|
|
6809 1.38629 1.38629 1.38629 1.38629
|
|
6810 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6811 43 0.15719 3.27118 2.73043 3.16274 43 - -
|
|
6812 1.38629 1.38629 1.38629 1.38629
|
|
6813 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6814 44 2.97980 2.52563 3.03204 0.19727 44 - -
|
|
6815 1.38629 1.38629 1.38629 1.38629
|
|
6816 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
6817 45 0.15719 3.27118 2.73043 3.16274 45 - -
|
|
6818 1.38629 1.38629 1.38629 1.38629
|
|
6819 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
|
|
6820 //
|
|
6821 HMMER3/b [3.0 | March 2010]
|
|
6822 NAME 4_LSU_Chlorophyta_4_LSU_start_three_long
|
|
6823 LENG 45
|
|
6824 ALPH DNA
|
|
6825 RF no
|
|
6826 CS no
|
|
6827 MAP yes
|
|
6828 DATE Sat Jan 28 01:33:03 2012
|
|
6829 NSEQ 11
|
|
6830 EFFN 3.397217
|
|
6831 CKSUM 3928018479
|
|
6832 STATS LOCAL MSV -7.3779 0.71931
|
|
6833 STATS LOCAL VITERBI -7.7033 0.71931
|
|
6834 STATS LOCAL FORWARD -4.2315 0.71931
|
|
6835 HMM A C G T
|
|
6836 m->m m->i m->d i->m i->i d->m d->d
|
|
6837 COMPO 1.32042 1.51402 1.30568 1.41895
|
|
6838 1.38629 1.38629 1.38629 1.38629
|
|
6839 0.03639 4.02485 4.02485 1.46634 0.26236 0.00000 *
|
|
6840 1 1.38134 1.08048 2.05996 1.26632 1 - -
|
|
6841 1.38629 1.38629 1.38629 1.38629
|
|
6842 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
|
|
6843 2 3.11246 2.61030 3.15970 0.17488 2 - -
|
|
6844 1.38629 1.38629 1.38629 1.38629
|
|
6845 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
|
|
6846 3 3.11246 2.61030 3.15970 0.17488 3 - -
|
|
6847 1.38629 1.38629 1.38629 1.38629
|
|
6848 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
|
|
6849 4 3.11246 2.61030 3.15970 0.17488 4 - -
|
|
6850 1.38629 1.38629 1.38629 1.38629
|
|
6851 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
|
|
6852 5 2.96390 3.61162 0.11458 3.51878 5 - -
|
|
6853 1.38629 1.38629 1.38629 1.38629
|
|
6854 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
|
|
6855 6 0.13882 3.40383 2.81721 3.30774 6 - -
|
|
6856 1.38629 1.38629 1.38629 1.38629
|
|
6857 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
|
|
6858 7 3.46025 0.12702 3.50855 2.84871 7 - -
|
|
6859 1.38629 1.38629 1.38629 1.38629
|
|
6860 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
|
|
6861 8 2.96390 3.61162 0.11458 3.51878 8 - -
|
|
6862 1.38629 1.38629 1.38629 1.38629
|
|
6863 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
|
|
6864 9 0.13882 3.40383 2.81721 3.30774 9 - -
|
|
6865 1.38629 1.38629 1.38629 1.38629
|
|
6866 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
|
|
6867 10 3.11246 2.61030 3.15970 0.17488 10 - -
|
|
6868 1.38629 1.38629 1.38629 1.38629
|
|
6869 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
|
|
6870 11 2.96390 3.61162 0.11458 3.51878 11 - -
|
|
6871 1.38629 1.38629 1.38629 1.38629
|
|
6872 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
|
|
6873 12 3.11246 2.61030 3.15970 0.17488 12 - -
|
|
6874 1.38629 1.38629 1.38629 1.38629
|
|
6875 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
|
|
6876 13 3.11246 2.61030 3.15970 0.17488 13 - -
|
|
6877 1.38629 1.38629 1.38629 1.38629
|
|
6878 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
|
|
6879 14 2.96390 3.61162 0.11458 3.51878 14 - -
|
|
6880 1.38629 1.38629 1.38629 1.38629
|
|
6881 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
|
|
6882 15 3.11246 2.61030 3.15970 0.17488 15 - -
|
|
6883 1.38629 1.38629 1.38629 1.38629
|
|
6884 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
|
|
6885 16 3.46025 0.12702 3.50855 2.84871 16 - -
|
|
6886 1.38629 1.38629 1.38629 1.38629
|
|
6887 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
|
|
6888 17 2.96390 3.61162 0.11458 3.51878 17 - -
|
|
6889 1.38629 1.38629 1.38629 1.38629
|
|
6890 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
|
|
6891 18 2.96390 3.61162 0.11458 3.51878 18 - -
|
|
6892 1.38629 1.38629 1.38629 1.38629
|
|
6893 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
|
|
6894 19 3.46025 0.12702 3.50855 2.84871 19 - -
|
|
6895 1.38629 1.38629 1.38629 1.38629
|
|
6896 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
|
|
6897 20 2.96390 3.61162 0.11458 3.51878 20 - -
|
|
6898 1.38629 1.38629 1.38629 1.38629
|
|
6899 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
|
|
6900 21 0.13882 3.40383 2.81721 3.30774 21 - -
|
|
6901 1.38629 1.38629 1.38629 1.38629
|
|
6902 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
|
|
6903 22 2.96390 3.61162 0.11458 3.51878 22 - -
|
|
6904 1.38629 1.38629 1.38629 1.38629
|
|
6905 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
|
|
6906 23 2.96390 3.61162 0.11458 3.51878 23 - -
|
|
6907 1.38629 1.38629 1.38629 1.38629
|
|
6908 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
|
|
6909 24 0.13882 3.40383 2.81721 3.30774 24 - -
|
|
6910 1.38629 1.38629 1.38629 1.38629
|
|
6911 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
|
|
6912 25 0.13882 3.40383 2.81721 3.30774 25 - -
|
|
6913 1.38629 1.38629 1.38629 1.38629
|
|
6914 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
|
|
6915 26 0.13882 3.40383 2.81721 3.30774 26 - -
|
|
6916 1.38629 1.38629 1.38629 1.38629
|
|
6917 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
|
|
6918 27 3.46025 0.12702 3.50855 2.84871 27 - -
|
|
6919 1.38629 1.38629 1.38629 1.38629
|
|
6920 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
|
|
6921 28 3.46025 0.12702 3.50855 2.84871 28 - -
|
|
6922 1.38629 1.38629 1.38629 1.38629
|
|
6923 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
|
|
6924 29 3.46025 0.12702 3.50855 2.84871 29 - -
|
|
6925 1.38629 1.38629 1.38629 1.38629
|
|
6926 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
|
|
6927 30 2.96390 3.61162 0.11458 3.51878 30 - -
|
|
6928 1.38629 1.38629 1.38629 1.38629
|
|
6929 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
|
|
6930 31 3.46025 0.12702 3.50855 2.84871 31 - -
|
|
6931 1.38629 1.38629 1.38629 1.38629
|
|
6932 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
|
|
6933 32 3.11246 2.61030 3.15970 0.17488 32 - -
|
|
6934 1.38629 1.38629 1.38629 1.38629
|
|
6935 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
|
|
6936 33 2.96390 3.61162 0.11458 3.51878 33 - -
|
|
6937 1.38629 1.38629 1.38629 1.38629
|
|
6938 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
|
|
6939 34 0.13882 3.40383 2.81721 3.30774 34 - -
|
|
6940 1.38629 1.38629 1.38629 1.38629
|
|
6941 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
|
|
6942 35 0.13882 3.40383 2.81721 3.30774 35 - -
|
|
6943 1.38629 1.38629 1.38629 1.38629
|
|
6944 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
|
|
6945 36 3.46025 0.12702 3.50855 2.84871 36 - -
|
|
6946 1.38629 1.38629 1.38629 1.38629
|
|
6947 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
|
|
6948 37 3.11246 2.61030 3.15970 0.17488 37 - -
|
|
6949 1.38629 1.38629 1.38629 1.38629
|
|
6950 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
|
|
6951 38 3.11246 2.61030 3.15970 0.17488 38 - -
|
|
6952 1.38629 1.38629 1.38629 1.38629
|
|
6953 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
|
|
6954 39 0.13882 3.40383 2.81721 3.30774 39 - -
|
|
6955 1.38629 1.38629 1.38629 1.38629
|
|
6956 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
|
|
6957 40 0.13882 3.40383 2.81721 3.30774 40 - -
|
|
6958 1.38629 1.38629 1.38629 1.38629
|
|
6959 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
|
|
6960 41 2.96390 3.61162 0.11458 3.51878 41 - -
|
|
6961 1.38629 1.38629 1.38629 1.38629
|
|
6962 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
|
|
6963 42 3.46025 0.12702 3.50855 2.84871 42 - -
|
|
6964 1.38629 1.38629 1.38629 1.38629
|
|
6965 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
|
|
6966 43 0.13882 3.40383 2.81721 3.30774 43 - -
|
|
6967 1.38629 1.38629 1.38629 1.38629
|
|
6968 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
|
|
6969 44 3.11246 2.61030 3.15970 0.17488 44 - -
|
|
6970 1.38629 1.38629 1.38629 1.38629
|
|
6971 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
|
|
6972 45 0.13882 3.40383 2.81721 3.30774 45 - -
|
|
6973 1.38629 1.38629 1.38629 1.38629
|
|
6974 0.01836 4.00683 * 1.46634 0.26236 0.00000 *
|
|
6975 //
|
|
6976 HMMER3/b [3.0 | March 2010]
|
|
6977 NAME 4_LSU_Chlorophyta_4_LSU_start_twoa_long
|
|
6978 LENG 45
|
|
6979 ALPH DNA
|
|
6980 RF no
|
|
6981 CS no
|
|
6982 MAP yes
|
|
6983 DATE Sat Jan 28 01:32:44 2012
|
|
6984 NSEQ 4
|
|
6985 EFFN 3.238281
|
|
6986 CKSUM 4153052600
|
|
6987 STATS LOCAL MSV -8.0299 0.71931
|
|
6988 STATS LOCAL VITERBI -7.6112 0.71931
|
|
6989 STATS LOCAL FORWARD -4.0920 0.71931
|
|
6990 HMM A C G T
|
|
6991 m->m m->i m->d i->m i->i d->m d->d
|
|
6992 COMPO 1.33774 1.39206 1.38059 1.43731
|
|
6993 1.38629 1.38629 1.38629 1.38629
|
|
6994 0.03747 3.99605 3.99605 1.46634 0.26236 0.00000 *
|
|
6995 1 0.14557 3.35286 2.78409 3.25194 1 - -
|
|
6996 1.38629 1.38629 1.38629 1.38629
|
|
6997 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
|
|
6998 2 3.06103 2.57758 3.11024 0.18319 2 - -
|
|
6999 1.38629 1.38629 1.38629 1.38629
|
|
7000 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
|
|
7001 3 3.06103 2.57758 3.11024 0.18319 3 - -
|
|
7002 1.38629 1.38629 1.38629 1.38629
|
|
7003 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
|
|
7004 4 3.40150 0.13404 3.45229 2.80593 4 - -
|
|
7005 1.38629 1.38629 1.38629 1.38629
|
|
7006 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
|
|
7007 5 2.92831 3.55987 0.12026 3.46167 5 - -
|
|
7008 1.38629 1.38629 1.38629 1.38629
|
|
7009 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
|
|
7010 6 0.14557 3.35286 2.78409 3.25194 6 - -
|
|
7011 1.38629 1.38629 1.38629 1.38629
|
|
7012 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
|
|
7013 7 3.40150 0.13404 3.45229 2.80593 7 - -
|
|
7014 1.38629 1.38629 1.38629 1.38629
|
|
7015 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
|
|
7016 8 3.40150 0.13404 3.45229 2.80593 8 - -
|
|
7017 1.38629 1.38629 1.38629 1.38629
|
|
7018 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
|
|
7019 9 3.06103 2.57758 3.11024 0.18319 9 - -
|
|
7020 1.38629 1.38629 1.38629 1.38629
|
|
7021 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
|
|
7022 10 2.92831 3.55987 0.12026 3.46167 10 - -
|
|
7023 1.38629 1.38629 1.38629 1.38629
|
|
7024 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
|
|
7025 11 0.14557 3.35286 2.78409 3.25194 11 - -
|
|
7026 1.38629 1.38629 1.38629 1.38629
|
|
7027 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
|
|
7028 12 2.92831 3.55987 0.12026 3.46167 12 - -
|
|
7029 1.38629 1.38629 1.38629 1.38629
|
|
7030 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
|
|
7031 13 3.06103 2.57758 3.11024 0.18319 13 - -
|
|
7032 1.38629 1.38629 1.38629 1.38629
|
|
7033 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
|
|
7034 14 3.06103 2.57758 3.11024 0.18319 14 - -
|
|
7035 1.38629 1.38629 1.38629 1.38629
|
|
7036 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
|
|
7037 15 3.40150 0.13404 3.45229 2.80593 15 - -
|
|
7038 1.38629 1.38629 1.38629 1.38629
|
|
7039 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
|
|
7040 16 0.14557 3.35286 2.78409 3.25194 16 - -
|
|
7041 1.38629 1.38629 1.38629 1.38629
|
|
7042 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
|
|
7043 17 2.92831 3.55987 0.12026 3.46167 17 - -
|
|
7044 1.38629 1.38629 1.38629 1.38629
|
|
7045 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
|
|
7046 18 2.92831 3.55987 0.12026 3.46167 18 - -
|
|
7047 1.38629 1.38629 1.38629 1.38629
|
|
7048 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
|
|
7049 19 3.06103 2.57758 3.11024 0.18319 19 - -
|
|
7050 1.38629 1.38629 1.38629 1.38629
|
|
7051 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
|
|
7052 20 2.92831 3.55987 0.12026 3.46167 20 - -
|
|
7053 1.38629 1.38629 1.38629 1.38629
|
|
7054 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
|
|
7055 21 0.14557 3.35286 2.78409 3.25194 21 - -
|
|
7056 1.38629 1.38629 1.38629 1.38629
|
|
7057 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
|
|
7058 22 2.92831 3.55987 0.12026 3.46167 22 - -
|
|
7059 1.38629 1.38629 1.38629 1.38629
|
|
7060 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
|
|
7061 23 2.92831 3.55987 0.12026 3.46167 23 - -
|
|
7062 1.38629 1.38629 1.38629 1.38629
|
|
7063 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
|
|
7064 24 3.40150 0.13404 3.45229 2.80593 24 - -
|
|
7065 1.38629 1.38629 1.38629 1.38629
|
|
7066 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
|
|
7067 25 3.06103 2.57758 3.11024 0.18319 25 - -
|
|
7068 1.38629 1.38629 1.38629 1.38629
|
|
7069 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
|
|
7070 26 0.14557 3.35286 2.78409 3.25194 26 - -
|
|
7071 1.38629 1.38629 1.38629 1.38629
|
|
7072 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
|
|
7073 27 3.40150 0.13404 3.45229 2.80593 27 - -
|
|
7074 1.38629 1.38629 1.38629 1.38629
|
|
7075 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
|
|
7076 28 3.40150 0.13404 3.45229 2.80593 28 - -
|
|
7077 1.38629 1.38629 1.38629 1.38629
|
|
7078 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
|
|
7079 29 3.40150 0.13404 3.45229 2.80593 29 - -
|
|
7080 1.38629 1.38629 1.38629 1.38629
|
|
7081 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
|
|
7082 30 2.92831 3.55987 0.12026 3.46167 30 - -
|
|
7083 1.38629 1.38629 1.38629 1.38629
|
|
7084 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
|
|
7085 31 3.40150 0.13404 3.45229 2.80593 31 - -
|
|
7086 1.38629 1.38629 1.38629 1.38629
|
|
7087 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
|
|
7088 32 3.06103 2.57758 3.11024 0.18319 32 - -
|
|
7089 1.38629 1.38629 1.38629 1.38629
|
|
7090 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
|
|
7091 33 2.92831 3.55987 0.12026 3.46167 33 - -
|
|
7092 1.38629 1.38629 1.38629 1.38629
|
|
7093 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
|
|
7094 34 0.14557 3.35286 2.78409 3.25194 34 - -
|
|
7095 1.38629 1.38629 1.38629 1.38629
|
|
7096 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
|
|
7097 35 0.14557 3.35286 2.78409 3.25194 35 - -
|
|
7098 1.38629 1.38629 1.38629 1.38629
|
|
7099 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
|
|
7100 36 3.40150 0.13404 3.45229 2.80593 36 - -
|
|
7101 1.38629 1.38629 1.38629 1.38629
|
|
7102 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
|
|
7103 37 3.06103 2.57758 3.11024 0.18319 37 - -
|
|
7104 1.38629 1.38629 1.38629 1.38629
|
|
7105 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
|
|
7106 38 3.06103 2.57758 3.11024 0.18319 38 - -
|
|
7107 1.38629 1.38629 1.38629 1.38629
|
|
7108 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
|
|
7109 39 0.14557 3.35286 2.78409 3.25194 39 - -
|
|
7110 1.38629 1.38629 1.38629 1.38629
|
|
7111 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
|
|
7112 40 0.14557 3.35286 2.78409 3.25194 40 - -
|
|
7113 1.38629 1.38629 1.38629 1.38629
|
|
7114 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
|
|
7115 41 2.92831 3.55987 0.12026 3.46167 41 - -
|
|
7116 1.38629 1.38629 1.38629 1.38629
|
|
7117 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
|
|
7118 42 3.40150 0.13404 3.45229 2.80593 42 - -
|
|
7119 1.38629 1.38629 1.38629 1.38629
|
|
7120 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
|
|
7121 43 0.14557 3.35286 2.78409 3.25194 43 - -
|
|
7122 1.38629 1.38629 1.38629 1.38629
|
|
7123 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
|
|
7124 44 3.06103 2.57758 3.11024 0.18319 44 - -
|
|
7125 1.38629 1.38629 1.38629 1.38629
|
|
7126 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
|
|
7127 45 0.14557 3.35286 2.78409 3.25194 45 - -
|
|
7128 1.38629 1.38629 1.38629 1.38629
|
|
7129 0.01891 3.97749 * 1.46634 0.26236 0.00000 *
|
|
7130 //
|
|
7131 HMMER3/b [3.0 | March 2010]
|
|
7132 NAME 4_LSU_Chlorophyta_4_LSU_start_twob_long
|
|
7133 LENG 45
|
|
7134 ALPH DNA
|
|
7135 RF no
|
|
7136 CS no
|
|
7137 MAP yes
|
|
7138 DATE Sat Jan 28 01:32:51 2012
|
|
7139 NSEQ 2
|
|
7140 EFFN 2.000000
|
|
7141 CKSUM 1487093802
|
|
7142 STATS LOCAL MSV -7.3807 0.72793
|
|
7143 STATS LOCAL VITERBI -8.0673 0.72793
|
|
7144 STATS LOCAL FORWARD -3.4730 0.72793
|
|
7145 HMM A C G T
|
|
7146 m->m m->i m->d i->m i->i d->m d->d
|
|
7147 COMPO 1.28936 1.34641 1.43436 1.48672
|
|
7148 1.38629 1.38629 1.38629 1.38629
|
|
7149 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
7150 1 0.23862 2.84929 2.43386 2.70756 1 - -
|
|
7151 1.38629 1.38629 1.38629 1.38629
|
|
7152 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7153 2 2.57915 2.25909 2.64442 0.28946 2 - -
|
|
7154 1.38629 1.38629 1.38629 1.38629
|
|
7155 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7156 3 2.81865 0.23582 2.88868 2.35662 3 - -
|
|
7157 1.38629 1.38629 1.38629 1.38629
|
|
7158 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7159 4 2.57915 2.25909 2.64442 0.28946 4 - -
|
|
7160 1.38629 1.38629 1.38629 1.38629
|
|
7161 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7162 5 2.53331 3.02441 0.20344 2.88069 5 - -
|
|
7163 1.38629 1.38629 1.38629 1.38629
|
|
7164 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7165 6 2.53331 3.02441 0.20344 2.88069 6 - -
|
|
7166 1.38629 1.38629 1.38629 1.38629
|
|
7167 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7168 7 2.81865 0.23582 2.88868 2.35662 7 - -
|
|
7169 1.38629 1.38629 1.38629 1.38629
|
|
7170 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7171 8 2.81865 0.23582 2.88868 2.35662 8 - -
|
|
7172 1.38629 1.38629 1.38629 1.38629
|
|
7173 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7174 9 2.57915 2.25909 2.64442 0.28946 9 - -
|
|
7175 1.38629 1.38629 1.38629 1.38629
|
|
7176 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7177 10 2.81865 0.23582 2.88868 2.35662 10 - -
|
|
7178 1.38629 1.38629 1.38629 1.38629
|
|
7179 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7180 11 0.23862 2.84929 2.43386 2.70756 11 - -
|
|
7181 1.38629 1.38629 1.38629 1.38629
|
|
7182 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7183 12 0.23862 2.84929 2.43386 2.70756 12 - -
|
|
7184 1.38629 1.38629 1.38629 1.38629
|
|
7185 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7186 13 0.23862 2.84929 2.43386 2.70756 13 - -
|
|
7187 1.38629 1.38629 1.38629 1.38629
|
|
7188 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7189 14 2.57915 2.25909 2.64442 0.28946 14 - -
|
|
7190 1.38629 1.38629 1.38629 1.38629
|
|
7191 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7192 15 2.81865 0.23582 2.88868 2.35662 15 - -
|
|
7193 1.38629 1.38629 1.38629 1.38629
|
|
7194 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7195 16 0.23862 2.84929 2.43386 2.70756 16 - -
|
|
7196 1.38629 1.38629 1.38629 1.38629
|
|
7197 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7198 17 2.53331 3.02441 0.20344 2.88069 17 - -
|
|
7199 1.38629 1.38629 1.38629 1.38629
|
|
7200 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7201 18 2.53331 3.02441 0.20344 2.88069 18 - -
|
|
7202 1.38629 1.38629 1.38629 1.38629
|
|
7203 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7204 19 2.57915 2.25909 2.64442 0.28946 19 - -
|
|
7205 1.38629 1.38629 1.38629 1.38629
|
|
7206 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7207 20 0.23862 2.84929 2.43386 2.70756 20 - -
|
|
7208 1.38629 1.38629 1.38629 1.38629
|
|
7209 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7210 21 2.53331 3.02441 0.20344 2.88069 21 - -
|
|
7211 1.38629 1.38629 1.38629 1.38629
|
|
7212 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7213 22 2.53331 3.02441 0.20344 2.88069 22 - -
|
|
7214 1.38629 1.38629 1.38629 1.38629
|
|
7215 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7216 23 2.53331 3.02441 0.20344 2.88069 23 - -
|
|
7217 1.38629 1.38629 1.38629 1.38629
|
|
7218 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7219 24 2.81865 0.23582 2.88868 2.35662 24 - -
|
|
7220 1.38629 1.38629 1.38629 1.38629
|
|
7221 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7222 25 2.57915 2.25909 2.64442 0.28946 25 - -
|
|
7223 1.38629 1.38629 1.38629 1.38629
|
|
7224 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7225 26 0.23862 2.84929 2.43386 2.70756 26 - -
|
|
7226 1.38629 1.38629 1.38629 1.38629
|
|
7227 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7228 27 2.81865 0.23582 2.88868 2.35662 27 - -
|
|
7229 1.38629 1.38629 1.38629 1.38629
|
|
7230 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7231 28 2.81865 0.23582 2.88868 2.35662 28 - -
|
|
7232 1.38629 1.38629 1.38629 1.38629
|
|
7233 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7234 29 2.81865 0.23582 2.88868 2.35662 29 - -
|
|
7235 1.38629 1.38629 1.38629 1.38629
|
|
7236 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7237 30 2.53331 3.02441 0.20344 2.88069 30 - -
|
|
7238 1.38629 1.38629 1.38629 1.38629
|
|
7239 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7240 31 2.81865 0.23582 2.88868 2.35662 31 - -
|
|
7241 1.38629 1.38629 1.38629 1.38629
|
|
7242 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7243 32 2.57915 2.25909 2.64442 0.28946 32 - -
|
|
7244 1.38629 1.38629 1.38629 1.38629
|
|
7245 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7246 33 2.53331 3.02441 0.20344 2.88069 33 - -
|
|
7247 1.38629 1.38629 1.38629 1.38629
|
|
7248 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7249 34 0.23862 2.84929 2.43386 2.70756 34 - -
|
|
7250 1.38629 1.38629 1.38629 1.38629
|
|
7251 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7252 35 0.23862 2.84929 2.43386 2.70756 35 - -
|
|
7253 1.38629 1.38629 1.38629 1.38629
|
|
7254 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7255 36 2.81865 0.23582 2.88868 2.35662 36 - -
|
|
7256 1.38629 1.38629 1.38629 1.38629
|
|
7257 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7258 37 2.57915 2.25909 2.64442 0.28946 37 - -
|
|
7259 1.38629 1.38629 1.38629 1.38629
|
|
7260 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7261 38 2.57915 2.25909 2.64442 0.28946 38 - -
|
|
7262 1.38629 1.38629 1.38629 1.38629
|
|
7263 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7264 39 0.23862 2.84929 2.43386 2.70756 39 - -
|
|
7265 1.38629 1.38629 1.38629 1.38629
|
|
7266 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7267 40 0.23862 2.84929 2.43386 2.70756 40 - -
|
|
7268 1.38629 1.38629 1.38629 1.38629
|
|
7269 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7270 41 2.53331 3.02441 0.20344 2.88069 41 - -
|
|
7271 1.38629 1.38629 1.38629 1.38629
|
|
7272 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7273 42 2.81865 0.23582 2.88868 2.35662 42 - -
|
|
7274 1.38629 1.38629 1.38629 1.38629
|
|
7275 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7276 43 0.23862 2.84929 2.43386 2.70756 43 - -
|
|
7277 1.38629 1.38629 1.38629 1.38629
|
|
7278 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7279 44 2.57915 2.25909 2.64442 0.28946 44 - -
|
|
7280 1.38629 1.38629 1.38629 1.38629
|
|
7281 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7282 45 0.23862 2.84929 2.43386 2.70756 45 - -
|
|
7283 1.38629 1.38629 1.38629 1.38629
|
|
7284 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
7285 //
|
|
7286 HMMER3/b [3.0 | March 2010]
|
|
7287 NAME 1_SSU_Chlorophyta_1_SSU_end_five_long
|
|
7288 LENG 45
|
|
7289 ALPH DNA
|
|
7290 RF no
|
|
7291 CS no
|
|
7292 MAP yes
|
|
7293 DATE Wed Jan 25 23:25:17 2012
|
|
7294 NSEQ 7
|
|
7295 EFFN 3.264160
|
|
7296 CKSUM 2375868780
|
|
7297 STATS LOCAL MSV -8.0557 0.71932
|
|
7298 STATS LOCAL VITERBI -7.7021 0.71932
|
|
7299 STATS LOCAL FORWARD -4.0473 0.71932
|
|
7300 HMM A C G T
|
|
7301 m->m m->i m->d i->m i->i d->m d->d
|
|
7302 COMPO 1.21299 1.71353 1.30623 1.37981
|
|
7303 1.38629 1.38629 1.38629 1.38629
|
|
7304 0.03729 4.00080 4.00080 1.46634 0.26236 0.00000 *
|
|
7305 1 0.14442 3.36134 2.78962 3.26122 1 - -
|
|
7306 1.38629 1.38629 1.38629 1.38629
|
|
7307 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
|
|
7308 2 2.93428 3.56852 0.11929 3.47120 2 - -
|
|
7309 1.38629 1.38629 1.38629 1.38629
|
|
7310 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
|
|
7311 3 3.06955 2.58301 3.11843 0.18178 3 - -
|
|
7312 1.38629 1.38629 1.38629 1.38629
|
|
7313 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
|
|
7314 4 3.41129 0.13284 3.46167 2.81309 4 - -
|
|
7315 1.38629 1.38629 1.38629 1.38629
|
|
7316 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
|
|
7317 5 2.93428 3.56852 0.11929 3.47120 5 - -
|
|
7318 1.38629 1.38629 1.38629 1.38629
|
|
7319 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
|
|
7320 6 3.06955 2.58301 3.11843 0.18178 6 - -
|
|
7321 1.38629 1.38629 1.38629 1.38629
|
|
7322 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
|
|
7323 7 0.14442 3.36134 2.78962 3.26122 7 - -
|
|
7324 1.38629 1.38629 1.38629 1.38629
|
|
7325 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
|
|
7326 8 0.14442 3.36134 2.78962 3.26122 8 - -
|
|
7327 1.38629 1.38629 1.38629 1.38629
|
|
7328 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
|
|
7329 9 3.41129 0.13284 3.46167 2.81309 9 - -
|
|
7330 1.38629 1.38629 1.38629 1.38629
|
|
7331 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
|
|
7332 10 0.14442 3.36134 2.78962 3.26122 10 - -
|
|
7333 1.38629 1.38629 1.38629 1.38629
|
|
7334 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
|
|
7335 11 0.14442 3.36134 2.78962 3.26122 11 - -
|
|
7336 1.38629 1.38629 1.38629 1.38629
|
|
7337 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
|
|
7338 12 2.93428 3.56852 0.11929 3.47120 12 - -
|
|
7339 1.38629 1.38629 1.38629 1.38629
|
|
7340 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
|
|
7341 13 2.93428 3.56852 0.11929 3.47120 13 - -
|
|
7342 1.38629 1.38629 1.38629 1.38629
|
|
7343 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
|
|
7344 14 3.06955 2.58301 3.11843 0.18178 14 - -
|
|
7345 1.38629 1.38629 1.38629 1.38629
|
|
7346 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
|
|
7347 15 3.06955 2.58301 3.11843 0.18178 15 - -
|
|
7348 1.38629 1.38629 1.38629 1.38629
|
|
7349 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
|
|
7350 16 3.06955 2.58301 3.11843 0.18178 16 - -
|
|
7351 1.38629 1.38629 1.38629 1.38629
|
|
7352 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
|
|
7353 17 3.06955 2.58301 3.11843 0.18178 17 - -
|
|
7354 1.38629 1.38629 1.38629 1.38629
|
|
7355 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
|
|
7356 18 3.41129 0.13284 3.46167 2.81309 18 - -
|
|
7357 1.38629 1.38629 1.38629 1.38629
|
|
7358 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
|
|
7359 19 2.93428 3.56852 0.11929 3.47120 19 - -
|
|
7360 1.38629 1.38629 1.38629 1.38629
|
|
7361 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
|
|
7362 20 3.06955 2.58301 3.11843 0.18178 20 - -
|
|
7363 1.38629 1.38629 1.38629 1.38629
|
|
7364 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
|
|
7365 21 0.14442 3.36134 2.78962 3.26122 21 - -
|
|
7366 1.38629 1.38629 1.38629 1.38629
|
|
7367 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
|
|
7368 22 2.93428 3.56852 0.11929 3.47120 22 - -
|
|
7369 1.38629 1.38629 1.38629 1.38629
|
|
7370 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
|
|
7371 23 2.93428 3.56852 0.11929 3.47120 23 - -
|
|
7372 1.38629 1.38629 1.38629 1.38629
|
|
7373 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
|
|
7374 24 3.06955 2.58301 3.11843 0.18178 24 - -
|
|
7375 1.38629 1.38629 1.38629 1.38629
|
|
7376 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
|
|
7377 25 2.93428 3.56852 0.11929 3.47120 25 - -
|
|
7378 1.38629 1.38629 1.38629 1.38629
|
|
7379 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
|
|
7380 26 0.14442 3.36134 2.78962 3.26122 26 - -
|
|
7381 1.38629 1.38629 1.38629 1.38629
|
|
7382 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
|
|
7383 27 0.14442 3.36134 2.78962 3.26122 27 - -
|
|
7384 1.38629 1.38629 1.38629 1.38629
|
|
7385 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
|
|
7386 28 3.41129 0.13284 3.46167 2.81309 28 - -
|
|
7387 1.38629 1.38629 1.38629 1.38629
|
|
7388 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
|
|
7389 29 3.41129 0.13284 3.46167 2.81309 29 - -
|
|
7390 1.38629 1.38629 1.38629 1.38629
|
|
7391 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
|
|
7392 30 3.06955 2.58301 3.11843 0.18178 30 - -
|
|
7393 1.38629 1.38629 1.38629 1.38629
|
|
7394 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
|
|
7395 31 2.93428 3.56852 0.11929 3.47120 31 - -
|
|
7396 1.38629 1.38629 1.38629 1.38629
|
|
7397 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
|
|
7398 32 3.41129 0.13284 3.46167 2.81309 32 - -
|
|
7399 1.38629 1.38629 1.38629 1.38629
|
|
7400 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
|
|
7401 33 2.93428 3.56852 0.11929 3.47120 33 - -
|
|
7402 1.38629 1.38629 1.38629 1.38629
|
|
7403 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
|
|
7404 34 0.14442 3.36134 2.78962 3.26122 34 - -
|
|
7405 1.38629 1.38629 1.38629 1.38629
|
|
7406 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
|
|
7407 35 0.14442 3.36134 2.78962 3.26122 35 - -
|
|
7408 1.38629 1.38629 1.38629 1.38629
|
|
7409 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
|
|
7410 36 0.14442 3.36134 2.78962 3.26122 36 - -
|
|
7411 1.38629 1.38629 1.38629 1.38629
|
|
7412 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
|
|
7413 37 2.93428 3.56852 0.11929 3.47120 37 - -
|
|
7414 1.38629 1.38629 1.38629 1.38629
|
|
7415 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
|
|
7416 38 2.93428 3.56852 0.11929 3.47120 38 - -
|
|
7417 1.38629 1.38629 1.38629 1.38629
|
|
7418 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
|
|
7419 39 0.14442 3.36134 2.78962 3.26122 39 - -
|
|
7420 1.38629 1.38629 1.38629 1.38629
|
|
7421 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
|
|
7422 40 3.06955 2.58301 3.11843 0.18178 40 - -
|
|
7423 1.38629 1.38629 1.38629 1.38629
|
|
7424 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
|
|
7425 41 3.41129 0.13284 3.46167 2.81309 41 - -
|
|
7426 1.38629 1.38629 1.38629 1.38629
|
|
7427 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
|
|
7428 42 0.14442 3.36134 2.78962 3.26122 42 - -
|
|
7429 1.38629 1.38629 1.38629 1.38629
|
|
7430 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
|
|
7431 43 3.06955 2.58301 3.11843 0.18178 43 - -
|
|
7432 1.38629 1.38629 1.38629 1.38629
|
|
7433 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
|
|
7434 44 3.06955 2.58301 3.11843 0.18178 44 - -
|
|
7435 1.38629 1.38629 1.38629 1.38629
|
|
7436 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
|
|
7437 45 0.14442 3.36134 2.78962 3.26122 45 - -
|
|
7438 1.38629 1.38629 1.38629 1.38629
|
|
7439 0.01882 3.98232 * 1.46634 0.26236 0.00000 *
|
|
7440 //
|
|
7441 HMMER3/b [3.0 | March 2010]
|
|
7442 NAME 1_SSU_Chlorophyta_1_SSU_end_four_long
|
|
7443 LENG 45
|
|
7444 ALPH DNA
|
|
7445 RF no
|
|
7446 CS no
|
|
7447 MAP yes
|
|
7448 DATE Wed Jan 25 23:25:06 2012
|
|
7449 NSEQ 2
|
|
7450 EFFN 2.000000
|
|
7451 CKSUM 1482627613
|
|
7452 STATS LOCAL MSV -7.6096 0.72751
|
|
7453 STATS LOCAL VITERBI -8.2882 0.72751
|
|
7454 STATS LOCAL FORWARD -3.6834 0.72751
|
|
7455 HMM A C G T
|
|
7456 m->m m->i m->d i->m i->i d->m d->d
|
|
7457 COMPO 1.33866 1.47421 1.20851 1.55969
|
|
7458 1.38629 1.38629 1.38629 1.38629
|
|
7459 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
7460 1 0.23862 2.84929 2.43386 2.70756 1 - -
|
|
7461 1.38629 1.38629 1.38629 1.38629
|
|
7462 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7463 2 2.53331 3.02441 0.20344 2.88069 2 - -
|
|
7464 1.38629 1.38629 1.38629 1.38629
|
|
7465 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7466 3 2.57915 2.25909 2.64442 0.28946 3 - -
|
|
7467 1.38629 1.38629 1.38629 1.38629
|
|
7468 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7469 4 2.81865 0.23582 2.88868 2.35662 4 - -
|
|
7470 1.38629 1.38629 1.38629 1.38629
|
|
7471 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7472 5 2.53331 3.02441 0.20344 2.88069 5 - -
|
|
7473 1.38629 1.38629 1.38629 1.38629
|
|
7474 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7475 6 2.57915 2.25909 2.64442 0.28946 6 - -
|
|
7476 1.38629 1.38629 1.38629 1.38629
|
|
7477 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7478 7 0.23862 2.84929 2.43386 2.70756 7 - -
|
|
7479 1.38629 1.38629 1.38629 1.38629
|
|
7480 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7481 8 0.23862 2.84929 2.43386 2.70756 8 - -
|
|
7482 1.38629 1.38629 1.38629 1.38629
|
|
7483 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7484 9 2.81865 0.23582 2.88868 2.35662 9 - -
|
|
7485 1.38629 1.38629 1.38629 1.38629
|
|
7486 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7487 10 0.23862 2.84929 2.43386 2.70756 10 - -
|
|
7488 1.38629 1.38629 1.38629 1.38629
|
|
7489 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7490 11 0.23862 2.84929 2.43386 2.70756 11 - -
|
|
7491 1.38629 1.38629 1.38629 1.38629
|
|
7492 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7493 12 2.53331 3.02441 0.20344 2.88069 12 - -
|
|
7494 1.38629 1.38629 1.38629 1.38629
|
|
7495 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7496 13 2.53331 3.02441 0.20344 2.88069 13 - -
|
|
7497 1.38629 1.38629 1.38629 1.38629
|
|
7498 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7499 14 2.57915 2.25909 2.64442 0.28946 14 - -
|
|
7500 1.38629 1.38629 1.38629 1.38629
|
|
7501 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7502 15 2.81865 0.23582 2.88868 2.35662 15 - -
|
|
7503 1.38629 1.38629 1.38629 1.38629
|
|
7504 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7505 16 2.57915 2.25909 2.64442 0.28946 16 - -
|
|
7506 1.38629 1.38629 1.38629 1.38629
|
|
7507 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7508 17 2.81865 0.23582 2.88868 2.35662 17 - -
|
|
7509 1.38629 1.38629 1.38629 1.38629
|
|
7510 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7511 18 2.81865 0.23582 2.88868 2.35662 18 - -
|
|
7512 1.38629 1.38629 1.38629 1.38629
|
|
7513 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7514 19 2.53331 3.02441 0.20344 2.88069 19 - -
|
|
7515 1.38629 1.38629 1.38629 1.38629
|
|
7516 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7517 20 2.57915 2.25909 2.64442 0.28946 20 - -
|
|
7518 1.38629 1.38629 1.38629 1.38629
|
|
7519 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7520 21 0.23862 2.84929 2.43386 2.70756 21 - -
|
|
7521 1.38629 1.38629 1.38629 1.38629
|
|
7522 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7523 22 2.53331 3.02441 0.20344 2.88069 22 - -
|
|
7524 1.38629 1.38629 1.38629 1.38629
|
|
7525 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7526 23 2.53331 3.02441 0.20344 2.88069 23 - -
|
|
7527 1.38629 1.38629 1.38629 1.38629
|
|
7528 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7529 24 2.57915 2.25909 2.64442 0.28946 24 - -
|
|
7530 1.38629 1.38629 1.38629 1.38629
|
|
7531 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7532 25 2.53331 3.02441 0.20344 2.88069 25 - -
|
|
7533 1.38629 1.38629 1.38629 1.38629
|
|
7534 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7535 26 0.23862 2.84929 2.43386 2.70756 26 - -
|
|
7536 1.38629 1.38629 1.38629 1.38629
|
|
7537 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7538 27 0.23862 2.84929 2.43386 2.70756 27 - -
|
|
7539 1.38629 1.38629 1.38629 1.38629
|
|
7540 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7541 28 2.81865 0.23582 2.88868 2.35662 28 - -
|
|
7542 1.38629 1.38629 1.38629 1.38629
|
|
7543 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7544 29 2.81865 0.23582 2.88868 2.35662 29 - -
|
|
7545 1.38629 1.38629 1.38629 1.38629
|
|
7546 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7547 30 2.57915 2.25909 2.64442 0.28946 30 - -
|
|
7548 1.38629 1.38629 1.38629 1.38629
|
|
7549 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7550 31 2.53331 3.02441 0.20344 2.88069 31 - -
|
|
7551 1.38629 1.38629 1.38629 1.38629
|
|
7552 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7553 32 2.81865 0.23582 2.88868 2.35662 32 - -
|
|
7554 1.38629 1.38629 1.38629 1.38629
|
|
7555 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7556 33 2.53331 3.02441 0.20344 2.88069 33 - -
|
|
7557 1.38629 1.38629 1.38629 1.38629
|
|
7558 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7559 34 2.53331 3.02441 0.20344 2.88069 34 - -
|
|
7560 1.38629 1.38629 1.38629 1.38629
|
|
7561 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7562 35 0.23862 2.84929 2.43386 2.70756 35 - -
|
|
7563 1.38629 1.38629 1.38629 1.38629
|
|
7564 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7565 36 2.53331 3.02441 0.20344 2.88069 36 - -
|
|
7566 1.38629 1.38629 1.38629 1.38629
|
|
7567 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7568 37 2.53331 3.02441 0.20344 2.88069 37 - -
|
|
7569 1.38629 1.38629 1.38629 1.38629
|
|
7570 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7571 38 2.53331 3.02441 0.20344 2.88069 38 - -
|
|
7572 1.38629 1.38629 1.38629 1.38629
|
|
7573 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7574 39 0.23862 2.84929 2.43386 2.70756 39 - -
|
|
7575 1.38629 1.38629 1.38629 1.38629
|
|
7576 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7577 40 2.57915 2.25909 2.64442 0.28946 40 - -
|
|
7578 1.38629 1.38629 1.38629 1.38629
|
|
7579 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7580 41 2.81865 0.23582 2.88868 2.35662 41 - -
|
|
7581 1.38629 1.38629 1.38629 1.38629
|
|
7582 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7583 42 2.81865 0.23582 2.88868 2.35662 42 - -
|
|
7584 1.38629 1.38629 1.38629 1.38629
|
|
7585 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7586 43 0.23862 2.84929 2.43386 2.70756 43 - -
|
|
7587 1.38629 1.38629 1.38629 1.38629
|
|
7588 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7589 44 2.57915 2.25909 2.64442 0.28946 44 - -
|
|
7590 1.38629 1.38629 1.38629 1.38629
|
|
7591 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7592 45 0.23862 2.84929 2.43386 2.70756 45 - -
|
|
7593 1.38629 1.38629 1.38629 1.38629
|
|
7594 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
7595 //
|
|
7596 HMMER3/b [3.0 | March 2010]
|
|
7597 NAME 1_SSU_Chlorophyta_1_SSU_end_one_long
|
|
7598 LENG 45
|
|
7599 ALPH DNA
|
|
7600 RF no
|
|
7601 CS no
|
|
7602 MAP yes
|
|
7603 DATE Wed Jan 25 23:24:42 2012
|
|
7604 NSEQ 17
|
|
7605 EFFN 3.183350
|
|
7606 CKSUM 2896528741
|
|
7607 STATS LOCAL MSV -8.0312 0.71931
|
|
7608 STATS LOCAL VITERBI -7.7110 0.71931
|
|
7609 STATS LOCAL FORWARD -4.3559 0.71931
|
|
7610 HMM A C G T
|
|
7611 m->m m->i m->d i->m i->i d->m d->d
|
|
7612 COMPO 1.39905 1.54747 1.13673 1.51634
|
|
7613 1.38629 1.38629 1.38629 1.38629
|
|
7614 0.03786 3.98590 3.98590 1.46634 0.26236 0.00000 *
|
|
7615 1 0.14808 3.33460 2.77216 3.23198 1 - -
|
|
7616 1.38629 1.38629 1.38629 1.38629
|
|
7617 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
|
|
7618 2 2.91540 3.54122 0.12238 3.44111 2 - -
|
|
7619 1.38629 1.38629 1.38629 1.38629
|
|
7620 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
|
|
7621 3 3.04275 2.56593 3.09265 0.18625 3 - -
|
|
7622 1.38629 1.38629 1.38629 1.38629
|
|
7623 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
|
|
7624 4 3.38042 0.13667 3.43208 2.79048 4 - -
|
|
7625 1.38629 1.38629 1.38629 1.38629
|
|
7626 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
|
|
7627 5 2.91540 3.54122 0.12238 3.44111 5 - -
|
|
7628 1.38629 1.38629 1.38629 1.38629
|
|
7629 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
|
|
7630 6 3.04275 2.56593 3.09265 0.18625 6 - -
|
|
7631 1.38629 1.38629 1.38629 1.38629
|
|
7632 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
|
|
7633 7 0.14808 3.33460 2.77216 3.23198 7 - -
|
|
7634 1.38629 1.38629 1.38629 1.38629
|
|
7635 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
|
|
7636 8 0.14808 3.33460 2.77216 3.23198 8 - -
|
|
7637 1.38629 1.38629 1.38629 1.38629
|
|
7638 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
|
|
7639 9 3.38042 0.13667 3.43208 2.79048 9 - -
|
|
7640 1.38629 1.38629 1.38629 1.38629
|
|
7641 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
|
|
7642 10 0.14808 3.33460 2.77216 3.23198 10 - -
|
|
7643 1.38629 1.38629 1.38629 1.38629
|
|
7644 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
|
|
7645 11 0.14808 3.33460 2.77216 3.23198 11 - -
|
|
7646 1.38629 1.38629 1.38629 1.38629
|
|
7647 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
|
|
7648 12 2.91540 3.54122 0.12238 3.44111 12 - -
|
|
7649 1.38629 1.38629 1.38629 1.38629
|
|
7650 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
|
|
7651 13 2.91540 3.54122 0.12238 3.44111 13 - -
|
|
7652 1.38629 1.38629 1.38629 1.38629
|
|
7653 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
|
|
7654 14 3.04275 2.56593 3.09265 0.18625 14 - -
|
|
7655 1.38629 1.38629 1.38629 1.38629
|
|
7656 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
|
|
7657 15 3.38042 0.13667 3.43208 2.79048 15 - -
|
|
7658 1.38629 1.38629 1.38629 1.38629
|
|
7659 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
|
|
7660 16 3.04275 2.56593 3.09265 0.18625 16 - -
|
|
7661 1.38629 1.38629 1.38629 1.38629
|
|
7662 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
|
|
7663 17 3.38042 0.13667 3.43208 2.79048 17 - -
|
|
7664 1.38629 1.38629 1.38629 1.38629
|
|
7665 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
|
|
7666 18 3.38042 0.13667 3.43208 2.79048 18 - -
|
|
7667 1.38629 1.38629 1.38629 1.38629
|
|
7668 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
|
|
7669 19 2.91540 3.54122 0.12238 3.44111 19 - -
|
|
7670 1.38629 1.38629 1.38629 1.38629
|
|
7671 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
|
|
7672 20 3.04275 2.56593 3.09265 0.18625 20 - -
|
|
7673 1.38629 1.38629 1.38629 1.38629
|
|
7674 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
|
|
7675 21 0.14808 3.33460 2.77216 3.23198 21 - -
|
|
7676 1.38629 1.38629 1.38629 1.38629
|
|
7677 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
|
|
7678 22 2.91540 3.54122 0.12238 3.44111 22 - -
|
|
7679 1.38629 1.38629 1.38629 1.38629
|
|
7680 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
|
|
7681 23 2.91540 3.54122 0.12238 3.44111 23 - -
|
|
7682 1.38629 1.38629 1.38629 1.38629
|
|
7683 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
|
|
7684 24 3.04275 2.56593 3.09265 0.18625 24 - -
|
|
7685 1.38629 1.38629 1.38629 1.38629
|
|
7686 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
|
|
7687 25 2.91540 3.54122 0.12238 3.44111 25 - -
|
|
7688 1.38629 1.38629 1.38629 1.38629
|
|
7689 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
|
|
7690 26 0.14808 3.33460 2.77216 3.23198 26 - -
|
|
7691 1.38629 1.38629 1.38629 1.38629
|
|
7692 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
|
|
7693 27 0.14808 3.33460 2.77216 3.23198 27 - -
|
|
7694 1.38629 1.38629 1.38629 1.38629
|
|
7695 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
|
|
7696 28 3.38042 0.13667 3.43208 2.79048 28 - -
|
|
7697 1.38629 1.38629 1.38629 1.38629
|
|
7698 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
|
|
7699 29 3.38042 0.13667 3.43208 2.79048 29 - -
|
|
7700 1.38629 1.38629 1.38629 1.38629
|
|
7701 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
|
|
7702 30 3.04275 2.56593 3.09265 0.18625 30 - -
|
|
7703 1.38629 1.38629 1.38629 1.38629
|
|
7704 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
|
|
7705 31 2.91540 3.54122 0.12238 3.44111 31 - -
|
|
7706 1.38629 1.38629 1.38629 1.38629
|
|
7707 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
|
|
7708 32 3.38042 0.13667 3.43208 2.79048 32 - -
|
|
7709 1.38629 1.38629 1.38629 1.38629
|
|
7710 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
|
|
7711 33 2.91540 3.54122 0.12238 3.44111 33 - -
|
|
7712 1.38629 1.38629 1.38629 1.38629
|
|
7713 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
|
|
7714 34 2.91540 3.54122 0.12238 3.44111 34 - -
|
|
7715 1.38629 1.38629 1.38629 1.38629
|
|
7716 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
|
|
7717 35 0.14808 3.33460 2.77216 3.23198 35 - -
|
|
7718 1.38629 1.38629 1.38629 1.38629
|
|
7719 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
|
|
7720 36 2.91540 3.54122 0.12238 3.44111 36 - -
|
|
7721 1.38629 1.38629 1.38629 1.38629
|
|
7722 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
|
|
7723 37 2.91540 3.54122 0.12238 3.44111 37 - -
|
|
7724 1.38629 1.38629 1.38629 1.38629
|
|
7725 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
|
|
7726 38 2.91540 3.54122 0.12238 3.44111 38 - -
|
|
7727 1.38629 1.38629 1.38629 1.38629
|
|
7728 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
|
|
7729 39 0.14808 3.33460 2.77216 3.23198 39 - -
|
|
7730 1.38629 1.38629 1.38629 1.38629
|
|
7731 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
|
|
7732 40 3.04275 2.56593 3.09265 0.18625 40 - -
|
|
7733 1.38629 1.38629 1.38629 1.38629
|
|
7734 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
|
|
7735 41 3.38042 0.13667 3.43208 2.79048 41 - -
|
|
7736 1.38629 1.38629 1.38629 1.38629
|
|
7737 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
|
|
7738 42 0.14808 3.33460 2.77216 3.23198 42 - -
|
|
7739 1.38629 1.38629 1.38629 1.38629
|
|
7740 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
|
|
7741 43 3.04275 2.56593 3.09265 0.18625 43 - -
|
|
7742 1.38629 1.38629 1.38629 1.38629
|
|
7743 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
|
|
7744 44 3.04275 2.56593 3.09265 0.18625 44 - -
|
|
7745 1.38629 1.38629 1.38629 1.38629
|
|
7746 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
|
|
7747 45 2.91540 3.54122 0.12238 3.44111 45 - -
|
|
7748 1.38629 1.38629 1.38629 1.38629
|
|
7749 0.01911 3.96715 * 1.46634 0.26236 0.00000 *
|
|
7750 //
|
|
7751 HMMER3/b [3.0 | March 2010]
|
|
7752 NAME 1_SSU_Chlorophyta_1_SSU_end_seven_long
|
|
7753 LENG 45
|
|
7754 ALPH DNA
|
|
7755 RF no
|
|
7756 CS no
|
|
7757 MAP yes
|
|
7758 DATE Wed Jan 25 23:25:34 2012
|
|
7759 NSEQ 2
|
|
7760 EFFN 2.000000
|
|
7761 CKSUM 1241919471
|
|
7762 STATS LOCAL MSV -7.4998 0.72801
|
|
7763 STATS LOCAL VITERBI -8.1905 0.72801
|
|
7764 STATS LOCAL FORWARD -3.4574 0.72801
|
|
7765 HMM A C G T
|
|
7766 m->m m->i m->d i->m i->i d->m d->d
|
|
7767 COMPO 1.33801 1.52553 1.31435 1.38040
|
|
7768 1.38629 1.38629 1.38629 1.38629
|
|
7769 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
7770 1 0.23862 2.84929 2.43386 2.70756 1 - -
|
|
7771 1.38629 1.38629 1.38629 1.38629
|
|
7772 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7773 2 2.57915 2.25909 2.64442 0.28946 2 - -
|
|
7774 1.38629 1.38629 1.38629 1.38629
|
|
7775 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7776 3 2.57915 2.25909 2.64442 0.28946 3 - -
|
|
7777 1.38629 1.38629 1.38629 1.38629
|
|
7778 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7779 4 2.81865 0.23582 2.88868 2.35662 4 - -
|
|
7780 1.38629 1.38629 1.38629 1.38629
|
|
7781 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7782 5 2.53331 3.02441 0.20344 2.88069 5 - -
|
|
7783 1.38629 1.38629 1.38629 1.38629
|
|
7784 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7785 6 2.57915 2.25909 2.64442 0.28946 6 - -
|
|
7786 1.38629 1.38629 1.38629 1.38629
|
|
7787 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7788 7 0.23862 2.84929 2.43386 2.70756 7 - -
|
|
7789 1.38629 1.38629 1.38629 1.38629
|
|
7790 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7791 8 0.23862 2.84929 2.43386 2.70756 8 - -
|
|
7792 1.38629 1.38629 1.38629 1.38629
|
|
7793 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7794 9 2.81865 0.23582 2.88868 2.35662 9 - -
|
|
7795 1.38629 1.38629 1.38629 1.38629
|
|
7796 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7797 10 2.81865 0.23582 2.88868 2.35662 10 - -
|
|
7798 1.38629 1.38629 1.38629 1.38629
|
|
7799 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7800 11 0.23862 2.84929 2.43386 2.70756 11 - -
|
|
7801 1.38629 1.38629 1.38629 1.38629
|
|
7802 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7803 12 0.23862 2.84929 2.43386 2.70756 12 - -
|
|
7804 1.38629 1.38629 1.38629 1.38629
|
|
7805 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7806 13 2.53331 3.02441 0.20344 2.88069 13 - -
|
|
7807 1.38629 1.38629 1.38629 1.38629
|
|
7808 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7809 14 2.57915 2.25909 2.64442 0.28946 14 - -
|
|
7810 1.38629 1.38629 1.38629 1.38629
|
|
7811 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7812 15 2.57915 2.25909 2.64442 0.28946 15 - -
|
|
7813 1.38629 1.38629 1.38629 1.38629
|
|
7814 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7815 16 2.57915 2.25909 2.64442 0.28946 16 - -
|
|
7816 1.38629 1.38629 1.38629 1.38629
|
|
7817 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7818 17 2.81865 0.23582 2.88868 2.35662 17 - -
|
|
7819 1.38629 1.38629 1.38629 1.38629
|
|
7820 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7821 18 2.81865 0.23582 2.88868 2.35662 18 - -
|
|
7822 1.38629 1.38629 1.38629 1.38629
|
|
7823 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7824 19 2.53331 3.02441 0.20344 2.88069 19 - -
|
|
7825 1.38629 1.38629 1.38629 1.38629
|
|
7826 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7827 20 2.57915 2.25909 2.64442 0.28946 20 - -
|
|
7828 1.38629 1.38629 1.38629 1.38629
|
|
7829 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7830 21 0.23862 2.84929 2.43386 2.70756 21 - -
|
|
7831 1.38629 1.38629 1.38629 1.38629
|
|
7832 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7833 22 2.53331 3.02441 0.20344 2.88069 22 - -
|
|
7834 1.38629 1.38629 1.38629 1.38629
|
|
7835 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7836 23 2.53331 3.02441 0.20344 2.88069 23 - -
|
|
7837 1.38629 1.38629 1.38629 1.38629
|
|
7838 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7839 24 2.57915 2.25909 2.64442 0.28946 24 - -
|
|
7840 1.38629 1.38629 1.38629 1.38629
|
|
7841 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7842 25 2.53331 3.02441 0.20344 2.88069 25 - -
|
|
7843 1.38629 1.38629 1.38629 1.38629
|
|
7844 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7845 26 0.23862 2.84929 2.43386 2.70756 26 - -
|
|
7846 1.38629 1.38629 1.38629 1.38629
|
|
7847 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7848 27 0.23862 2.84929 2.43386 2.70756 27 - -
|
|
7849 1.38629 1.38629 1.38629 1.38629
|
|
7850 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7851 28 2.81865 0.23582 2.88868 2.35662 28 - -
|
|
7852 1.38629 1.38629 1.38629 1.38629
|
|
7853 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7854 29 2.81865 0.23582 2.88868 2.35662 29 - -
|
|
7855 1.38629 1.38629 1.38629 1.38629
|
|
7856 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7857 30 2.57915 2.25909 2.64442 0.28946 30 - -
|
|
7858 1.38629 1.38629 1.38629 1.38629
|
|
7859 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7860 31 2.53331 3.02441 0.20344 2.88069 31 - -
|
|
7861 1.38629 1.38629 1.38629 1.38629
|
|
7862 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7863 32 2.81865 0.23582 2.88868 2.35662 32 - -
|
|
7864 1.38629 1.38629 1.38629 1.38629
|
|
7865 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7866 33 2.53331 3.02441 0.20344 2.88069 33 - -
|
|
7867 1.38629 1.38629 1.38629 1.38629
|
|
7868 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7869 34 2.53331 3.02441 0.20344 2.88069 34 - -
|
|
7870 1.38629 1.38629 1.38629 1.38629
|
|
7871 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7872 35 0.23862 2.84929 2.43386 2.70756 35 - -
|
|
7873 1.38629 1.38629 1.38629 1.38629
|
|
7874 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7875 36 0.23862 2.84929 2.43386 2.70756 36 - -
|
|
7876 1.38629 1.38629 1.38629 1.38629
|
|
7877 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7878 37 2.53331 3.02441 0.20344 2.88069 37 - -
|
|
7879 1.38629 1.38629 1.38629 1.38629
|
|
7880 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7881 38 2.53331 3.02441 0.20344 2.88069 38 - -
|
|
7882 1.38629 1.38629 1.38629 1.38629
|
|
7883 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7884 39 0.23862 2.84929 2.43386 2.70756 39 - -
|
|
7885 1.38629 1.38629 1.38629 1.38629
|
|
7886 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7887 40 2.57915 2.25909 2.64442 0.28946 40 - -
|
|
7888 1.38629 1.38629 1.38629 1.38629
|
|
7889 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7890 41 2.81865 0.23582 2.88868 2.35662 41 - -
|
|
7891 1.38629 1.38629 1.38629 1.38629
|
|
7892 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7893 42 0.23862 2.84929 2.43386 2.70756 42 - -
|
|
7894 1.38629 1.38629 1.38629 1.38629
|
|
7895 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7896 43 2.57915 2.25909 2.64442 0.28946 43 - -
|
|
7897 1.38629 1.38629 1.38629 1.38629
|
|
7898 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7899 44 2.57915 2.25909 2.64442 0.28946 44 - -
|
|
7900 1.38629 1.38629 1.38629 1.38629
|
|
7901 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
7902 45 2.53331 3.02441 0.20344 2.88069 45 - -
|
|
7903 1.38629 1.38629 1.38629 1.38629
|
|
7904 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
7905 //
|
|
7906 HMMER3/b [3.0 | March 2010]
|
|
7907 NAME 1_SSU_Chlorophyta_1_SSU_end_six_long
|
|
7908 LENG 45
|
|
7909 ALPH DNA
|
|
7910 RF no
|
|
7911 CS no
|
|
7912 MAP yes
|
|
7913 DATE Wed Jan 25 23:25:26 2012
|
|
7914 NSEQ 5
|
|
7915 EFFN 3.247070
|
|
7916 CKSUM 1322824676
|
|
7917 STATS LOCAL MSV -7.9755 0.71931
|
|
7918 STATS LOCAL VITERBI -7.6686 0.71931
|
|
7919 STATS LOCAL FORWARD -4.1183 0.71931
|
|
7920 HMM A C G T
|
|
7921 m->m m->i m->d i->m i->i d->m d->d
|
|
7922 COMPO 1.33346 1.62242 1.24914 1.37727
|
|
7923 1.38629 1.38629 1.38629 1.38629
|
|
7924 0.03741 3.99766 3.99766 1.46634 0.26236 0.00000 *
|
|
7925 1 0.14518 3.35575 2.78597 3.25510 1 - -
|
|
7926 1.38629 1.38629 1.38629 1.38629
|
|
7927 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
7928 2 3.06393 2.57943 3.11303 0.18271 2 - -
|
|
7929 1.38629 1.38629 1.38629 1.38629
|
|
7930 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
7931 3 3.06393 2.57943 3.11303 0.18271 3 - -
|
|
7932 1.38629 1.38629 1.38629 1.38629
|
|
7933 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
7934 4 3.40484 0.13363 3.45549 2.80837 4 - -
|
|
7935 1.38629 1.38629 1.38629 1.38629
|
|
7936 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
7937 5 2.93035 3.56282 0.11992 3.46492 5 - -
|
|
7938 1.38629 1.38629 1.38629 1.38629
|
|
7939 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
7940 6 3.06393 2.57943 3.11303 0.18271 6 - -
|
|
7941 1.38629 1.38629 1.38629 1.38629
|
|
7942 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
7943 7 0.14518 3.35575 2.78597 3.25510 7 - -
|
|
7944 1.38629 1.38629 1.38629 1.38629
|
|
7945 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
7946 8 0.14518 3.35575 2.78597 3.25510 8 - -
|
|
7947 1.38629 1.38629 1.38629 1.38629
|
|
7948 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
7949 9 3.40484 0.13363 3.45549 2.80837 9 - -
|
|
7950 1.38629 1.38629 1.38629 1.38629
|
|
7951 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
7952 10 0.14518 3.35575 2.78597 3.25510 10 - -
|
|
7953 1.38629 1.38629 1.38629 1.38629
|
|
7954 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
7955 11 0.14518 3.35575 2.78597 3.25510 11 - -
|
|
7956 1.38629 1.38629 1.38629 1.38629
|
|
7957 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
7958 12 2.93035 3.56282 0.11992 3.46492 12 - -
|
|
7959 1.38629 1.38629 1.38629 1.38629
|
|
7960 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
7961 13 2.93035 3.56282 0.11992 3.46492 13 - -
|
|
7962 1.38629 1.38629 1.38629 1.38629
|
|
7963 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
7964 14 3.06393 2.57943 3.11303 0.18271 14 - -
|
|
7965 1.38629 1.38629 1.38629 1.38629
|
|
7966 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
7967 15 3.06393 2.57943 3.11303 0.18271 15 - -
|
|
7968 1.38629 1.38629 1.38629 1.38629
|
|
7969 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
7970 16 3.06393 2.57943 3.11303 0.18271 16 - -
|
|
7971 1.38629 1.38629 1.38629 1.38629
|
|
7972 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
7973 17 3.40484 0.13363 3.45549 2.80837 17 - -
|
|
7974 1.38629 1.38629 1.38629 1.38629
|
|
7975 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
7976 18 3.40484 0.13363 3.45549 2.80837 18 - -
|
|
7977 1.38629 1.38629 1.38629 1.38629
|
|
7978 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
7979 19 2.93035 3.56282 0.11992 3.46492 19 - -
|
|
7980 1.38629 1.38629 1.38629 1.38629
|
|
7981 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
7982 20 3.06393 2.57943 3.11303 0.18271 20 - -
|
|
7983 1.38629 1.38629 1.38629 1.38629
|
|
7984 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
7985 21 0.14518 3.35575 2.78597 3.25510 21 - -
|
|
7986 1.38629 1.38629 1.38629 1.38629
|
|
7987 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
7988 22 2.93035 3.56282 0.11992 3.46492 22 - -
|
|
7989 1.38629 1.38629 1.38629 1.38629
|
|
7990 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
7991 23 2.93035 3.56282 0.11992 3.46492 23 - -
|
|
7992 1.38629 1.38629 1.38629 1.38629
|
|
7993 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
7994 24 3.06393 2.57943 3.11303 0.18271 24 - -
|
|
7995 1.38629 1.38629 1.38629 1.38629
|
|
7996 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
7997 25 2.93035 3.56282 0.11992 3.46492 25 - -
|
|
7998 1.38629 1.38629 1.38629 1.38629
|
|
7999 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
8000 26 0.14518 3.35575 2.78597 3.25510 26 - -
|
|
8001 1.38629 1.38629 1.38629 1.38629
|
|
8002 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
8003 27 0.14518 3.35575 2.78597 3.25510 27 - -
|
|
8004 1.38629 1.38629 1.38629 1.38629
|
|
8005 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
8006 28 3.40484 0.13363 3.45549 2.80837 28 - -
|
|
8007 1.38629 1.38629 1.38629 1.38629
|
|
8008 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
8009 29 3.40484 0.13363 3.45549 2.80837 29 - -
|
|
8010 1.38629 1.38629 1.38629 1.38629
|
|
8011 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
8012 30 3.06393 2.57943 3.11303 0.18271 30 - -
|
|
8013 1.38629 1.38629 1.38629 1.38629
|
|
8014 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
8015 31 2.93035 3.56282 0.11992 3.46492 31 - -
|
|
8016 1.38629 1.38629 1.38629 1.38629
|
|
8017 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
8018 32 3.40484 0.13363 3.45549 2.80837 32 - -
|
|
8019 1.38629 1.38629 1.38629 1.38629
|
|
8020 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
8021 33 2.93035 3.56282 0.11992 3.46492 33 - -
|
|
8022 1.38629 1.38629 1.38629 1.38629
|
|
8023 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
8024 34 2.93035 3.56282 0.11992 3.46492 34 - -
|
|
8025 1.38629 1.38629 1.38629 1.38629
|
|
8026 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
8027 35 0.14518 3.35575 2.78597 3.25510 35 - -
|
|
8028 1.38629 1.38629 1.38629 1.38629
|
|
8029 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
8030 36 0.14518 3.35575 2.78597 3.25510 36 - -
|
|
8031 1.38629 1.38629 1.38629 1.38629
|
|
8032 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
8033 37 2.93035 3.56282 0.11992 3.46492 37 - -
|
|
8034 1.38629 1.38629 1.38629 1.38629
|
|
8035 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
8036 38 2.93035 3.56282 0.11992 3.46492 38 - -
|
|
8037 1.38629 1.38629 1.38629 1.38629
|
|
8038 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
8039 39 0.14518 3.35575 2.78597 3.25510 39 - -
|
|
8040 1.38629 1.38629 1.38629 1.38629
|
|
8041 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
8042 40 3.06393 2.57943 3.11303 0.18271 40 - -
|
|
8043 1.38629 1.38629 1.38629 1.38629
|
|
8044 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
8045 41 3.40484 0.13363 3.45549 2.80837 41 - -
|
|
8046 1.38629 1.38629 1.38629 1.38629
|
|
8047 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
8048 42 0.14518 3.35575 2.78597 3.25510 42 - -
|
|
8049 1.38629 1.38629 1.38629 1.38629
|
|
8050 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
8051 43 3.06393 2.57943 3.11303 0.18271 43 - -
|
|
8052 1.38629 1.38629 1.38629 1.38629
|
|
8053 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
8054 44 3.06393 2.57943 3.11303 0.18271 44 - -
|
|
8055 1.38629 1.38629 1.38629 1.38629
|
|
8056 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
8057 45 2.93035 3.56282 0.11992 3.46492 45 - -
|
|
8058 1.38629 1.38629 1.38629 1.38629
|
|
8059 0.01888 3.97913 * 1.46634 0.26236 0.00000 *
|
|
8060 //
|
|
8061 HMMER3/b [3.0 | March 2010]
|
|
8062 NAME 1_SSU_Chlorophyta_1_SSU_end_three_long
|
|
8063 LENG 45
|
|
8064 ALPH DNA
|
|
8065 RF no
|
|
8066 CS no
|
|
8067 MAP yes
|
|
8068 DATE Wed Jan 25 23:24:57 2012
|
|
8069 NSEQ 4
|
|
8070 EFFN 3.230469
|
|
8071 CKSUM 805615287
|
|
8072 STATS LOCAL MSV -8.0211 0.71931
|
|
8073 STATS LOCAL VITERBI -7.6818 0.71931
|
|
8074 STATS LOCAL FORWARD -4.1105 0.71931
|
|
8075 HMM A C G T
|
|
8076 m->m m->i m->d i->m i->i d->m d->d
|
|
8077 COMPO 1.27186 1.62653 1.24657 1.44566
|
|
8078 1.38629 1.38629 1.38629 1.38629
|
|
8079 0.03752 3.99461 3.99461 1.46634 0.26236 0.00000 *
|
|
8080 1 0.14592 3.35028 2.78241 3.24912 1 - -
|
|
8081 1.38629 1.38629 1.38629 1.38629
|
|
8082 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
|
|
8083 2 2.92650 3.55724 0.12055 3.45877 2 - -
|
|
8084 1.38629 1.38629 1.38629 1.38629
|
|
8085 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
|
|
8086 3 3.05845 2.57594 3.10775 0.18362 3 - -
|
|
8087 1.38629 1.38629 1.38629 1.38629
|
|
8088 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
|
|
8089 4 3.39853 0.13441 3.44944 2.80375 4 - -
|
|
8090 1.38629 1.38629 1.38629 1.38629
|
|
8091 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
|
|
8092 5 2.92650 3.55724 0.12055 3.45877 5 - -
|
|
8093 1.38629 1.38629 1.38629 1.38629
|
|
8094 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
|
|
8095 6 3.05845 2.57594 3.10775 0.18362 6 - -
|
|
8096 1.38629 1.38629 1.38629 1.38629
|
|
8097 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
|
|
8098 7 0.14592 3.35028 2.78241 3.24912 7 - -
|
|
8099 1.38629 1.38629 1.38629 1.38629
|
|
8100 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
|
|
8101 8 0.14592 3.35028 2.78241 3.24912 8 - -
|
|
8102 1.38629 1.38629 1.38629 1.38629
|
|
8103 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
|
|
8104 9 3.39853 0.13441 3.44944 2.80375 9 - -
|
|
8105 1.38629 1.38629 1.38629 1.38629
|
|
8106 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
|
|
8107 10 0.14592 3.35028 2.78241 3.24912 10 - -
|
|
8108 1.38629 1.38629 1.38629 1.38629
|
|
8109 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
|
|
8110 11 0.14592 3.35028 2.78241 3.24912 11 - -
|
|
8111 1.38629 1.38629 1.38629 1.38629
|
|
8112 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
|
|
8113 12 2.92650 3.55724 0.12055 3.45877 12 - -
|
|
8114 1.38629 1.38629 1.38629 1.38629
|
|
8115 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
|
|
8116 13 2.92650 3.55724 0.12055 3.45877 13 - -
|
|
8117 1.38629 1.38629 1.38629 1.38629
|
|
8118 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
|
|
8119 14 3.05845 2.57594 3.10775 0.18362 14 - -
|
|
8120 1.38629 1.38629 1.38629 1.38629
|
|
8121 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
|
|
8122 15 3.05845 2.57594 3.10775 0.18362 15 - -
|
|
8123 1.38629 1.38629 1.38629 1.38629
|
|
8124 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
|
|
8125 16 3.05845 2.57594 3.10775 0.18362 16 - -
|
|
8126 1.38629 1.38629 1.38629 1.38629
|
|
8127 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
|
|
8128 17 3.39853 0.13441 3.44944 2.80375 17 - -
|
|
8129 1.38629 1.38629 1.38629 1.38629
|
|
8130 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
|
|
8131 18 3.39853 0.13441 3.44944 2.80375 18 - -
|
|
8132 1.38629 1.38629 1.38629 1.38629
|
|
8133 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
|
|
8134 19 2.92650 3.55724 0.12055 3.45877 19 - -
|
|
8135 1.38629 1.38629 1.38629 1.38629
|
|
8136 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
|
|
8137 20 3.05845 2.57594 3.10775 0.18362 20 - -
|
|
8138 1.38629 1.38629 1.38629 1.38629
|
|
8139 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
|
|
8140 21 0.14592 3.35028 2.78241 3.24912 21 - -
|
|
8141 1.38629 1.38629 1.38629 1.38629
|
|
8142 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
|
|
8143 22 2.92650 3.55724 0.12055 3.45877 22 - -
|
|
8144 1.38629 1.38629 1.38629 1.38629
|
|
8145 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
|
|
8146 23 2.92650 3.55724 0.12055 3.45877 23 - -
|
|
8147 1.38629 1.38629 1.38629 1.38629
|
|
8148 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
|
|
8149 24 3.05845 2.57594 3.10775 0.18362 24 - -
|
|
8150 1.38629 1.38629 1.38629 1.38629
|
|
8151 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
|
|
8152 25 2.92650 3.55724 0.12055 3.45877 25 - -
|
|
8153 1.38629 1.38629 1.38629 1.38629
|
|
8154 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
|
|
8155 26 0.14592 3.35028 2.78241 3.24912 26 - -
|
|
8156 1.38629 1.38629 1.38629 1.38629
|
|
8157 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
|
|
8158 27 0.14592 3.35028 2.78241 3.24912 27 - -
|
|
8159 1.38629 1.38629 1.38629 1.38629
|
|
8160 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
|
|
8161 28 3.39853 0.13441 3.44944 2.80375 28 - -
|
|
8162 1.38629 1.38629 1.38629 1.38629
|
|
8163 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
|
|
8164 29 3.39853 0.13441 3.44944 2.80375 29 - -
|
|
8165 1.38629 1.38629 1.38629 1.38629
|
|
8166 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
|
|
8167 30 3.05845 2.57594 3.10775 0.18362 30 - -
|
|
8168 1.38629 1.38629 1.38629 1.38629
|
|
8169 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
|
|
8170 31 2.92650 3.55724 0.12055 3.45877 31 - -
|
|
8171 1.38629 1.38629 1.38629 1.38629
|
|
8172 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
|
|
8173 32 3.39853 0.13441 3.44944 2.80375 32 - -
|
|
8174 1.38629 1.38629 1.38629 1.38629
|
|
8175 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
|
|
8176 33 2.92650 3.55724 0.12055 3.45877 33 - -
|
|
8177 1.38629 1.38629 1.38629 1.38629
|
|
8178 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
|
|
8179 34 2.92650 3.55724 0.12055 3.45877 34 - -
|
|
8180 1.38629 1.38629 1.38629 1.38629
|
|
8181 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
|
|
8182 35 0.14592 3.35028 2.78241 3.24912 35 - -
|
|
8183 1.38629 1.38629 1.38629 1.38629
|
|
8184 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
|
|
8185 36 0.14592 3.35028 2.78241 3.24912 36 - -
|
|
8186 1.38629 1.38629 1.38629 1.38629
|
|
8187 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
|
|
8188 37 2.92650 3.55724 0.12055 3.45877 37 - -
|
|
8189 1.38629 1.38629 1.38629 1.38629
|
|
8190 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
|
|
8191 38 2.92650 3.55724 0.12055 3.45877 38 - -
|
|
8192 1.38629 1.38629 1.38629 1.38629
|
|
8193 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
|
|
8194 39 0.14592 3.35028 2.78241 3.24912 39 - -
|
|
8195 1.38629 1.38629 1.38629 1.38629
|
|
8196 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
|
|
8197 40 3.05845 2.57594 3.10775 0.18362 40 - -
|
|
8198 1.38629 1.38629 1.38629 1.38629
|
|
8199 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
|
|
8200 41 3.39853 0.13441 3.44944 2.80375 41 - -
|
|
8201 1.38629 1.38629 1.38629 1.38629
|
|
8202 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
|
|
8203 42 0.14592 3.35028 2.78241 3.24912 42 - -
|
|
8204 1.38629 1.38629 1.38629 1.38629
|
|
8205 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
|
|
8206 43 3.05845 2.57594 3.10775 0.18362 43 - -
|
|
8207 1.38629 1.38629 1.38629 1.38629
|
|
8208 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
|
|
8209 44 3.05845 2.57594 3.10775 0.18362 44 - -
|
|
8210 1.38629 1.38629 1.38629 1.38629
|
|
8211 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
|
|
8212 45 0.14592 3.35028 2.78241 3.24912 45 - -
|
|
8213 1.38629 1.38629 1.38629 1.38629
|
|
8214 0.01894 3.97602 * 1.46634 0.26236 0.00000 *
|
|
8215 //
|
|
8216 HMMER3/b [3.0 | March 2010]
|
|
8217 NAME 1_SSU_Chlorophyta_1_SSU_end_two_long
|
|
8218 LENG 45
|
|
8219 ALPH DNA
|
|
8220 RF no
|
|
8221 CS no
|
|
8222 MAP yes
|
|
8223 DATE Wed Jan 25 23:24:49 2012
|
|
8224 NSEQ 14
|
|
8225 EFFN 3.216309
|
|
8226 CKSUM 4158192941
|
|
8227 STATS LOCAL MSV -7.9726 0.71932
|
|
8228 STATS LOCAL VITERBI -7.6791 0.71932
|
|
8229 STATS LOCAL FORWARD -4.0862 0.71932
|
|
8230 HMM A C G T
|
|
8231 m->m m->i m->d i->m i->i d->m d->d
|
|
8232 COMPO 1.33300 1.62698 1.18954 1.44633
|
|
8233 1.38629 1.38629 1.38629 1.38629
|
|
8234 0.03762 3.99200 3.99200 1.46634 0.26236 0.00000 *
|
|
8235 1 0.14656 3.34560 2.77935 3.24400 1 - -
|
|
8236 1.38629 1.38629 1.38629 1.38629
|
|
8237 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
|
|
8238 2 2.92319 3.55246 0.12110 3.45350 2 - -
|
|
8239 1.38629 1.38629 1.38629 1.38629
|
|
8240 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
|
|
8241 3 3.05375 2.57294 3.10323 0.18440 3 - -
|
|
8242 1.38629 1.38629 1.38629 1.38629
|
|
8243 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
|
|
8244 4 3.39312 0.13508 3.44425 2.79979 4 - -
|
|
8245 1.38629 1.38629 1.38629 1.38629
|
|
8246 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
|
|
8247 5 2.92319 3.55246 0.12110 3.45350 5 - -
|
|
8248 1.38629 1.38629 1.38629 1.38629
|
|
8249 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
|
|
8250 6 3.05375 2.57294 3.10323 0.18440 6 - -
|
|
8251 1.38629 1.38629 1.38629 1.38629
|
|
8252 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
|
|
8253 7 0.14656 3.34560 2.77935 3.24400 7 - -
|
|
8254 1.38629 1.38629 1.38629 1.38629
|
|
8255 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
|
|
8256 8 0.14656 3.34560 2.77935 3.24400 8 - -
|
|
8257 1.38629 1.38629 1.38629 1.38629
|
|
8258 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
|
|
8259 9 3.39312 0.13508 3.44425 2.79979 9 - -
|
|
8260 1.38629 1.38629 1.38629 1.38629
|
|
8261 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
|
|
8262 10 0.14656 3.34560 2.77935 3.24400 10 - -
|
|
8263 1.38629 1.38629 1.38629 1.38629
|
|
8264 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
|
|
8265 11 0.14656 3.34560 2.77935 3.24400 11 - -
|
|
8266 1.38629 1.38629 1.38629 1.38629
|
|
8267 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
|
|
8268 12 2.92319 3.55246 0.12110 3.45350 12 - -
|
|
8269 1.38629 1.38629 1.38629 1.38629
|
|
8270 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
|
|
8271 13 2.92319 3.55246 0.12110 3.45350 13 - -
|
|
8272 1.38629 1.38629 1.38629 1.38629
|
|
8273 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
|
|
8274 14 3.05375 2.57294 3.10323 0.18440 14 - -
|
|
8275 1.38629 1.38629 1.38629 1.38629
|
|
8276 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
|
|
8277 15 3.05375 2.57294 3.10323 0.18440 15 - -
|
|
8278 1.38629 1.38629 1.38629 1.38629
|
|
8279 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
|
|
8280 16 3.05375 2.57294 3.10323 0.18440 16 - -
|
|
8281 1.38629 1.38629 1.38629 1.38629
|
|
8282 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
|
|
8283 17 3.39312 0.13508 3.44425 2.79979 17 - -
|
|
8284 1.38629 1.38629 1.38629 1.38629
|
|
8285 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
|
|
8286 18 3.39312 0.13508 3.44425 2.79979 18 - -
|
|
8287 1.38629 1.38629 1.38629 1.38629
|
|
8288 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
|
|
8289 19 2.92319 3.55246 0.12110 3.45350 19 - -
|
|
8290 1.38629 1.38629 1.38629 1.38629
|
|
8291 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
|
|
8292 20 3.05375 2.57294 3.10323 0.18440 20 - -
|
|
8293 1.38629 1.38629 1.38629 1.38629
|
|
8294 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
|
|
8295 21 0.14656 3.34560 2.77935 3.24400 21 - -
|
|
8296 1.38629 1.38629 1.38629 1.38629
|
|
8297 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
|
|
8298 22 2.92319 3.55246 0.12110 3.45350 22 - -
|
|
8299 1.38629 1.38629 1.38629 1.38629
|
|
8300 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
|
|
8301 23 2.92319 3.55246 0.12110 3.45350 23 - -
|
|
8302 1.38629 1.38629 1.38629 1.38629
|
|
8303 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
|
|
8304 24 3.05375 2.57294 3.10323 0.18440 24 - -
|
|
8305 1.38629 1.38629 1.38629 1.38629
|
|
8306 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
|
|
8307 25 2.92319 3.55246 0.12110 3.45350 25 - -
|
|
8308 1.38629 1.38629 1.38629 1.38629
|
|
8309 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
|
|
8310 26 0.14656 3.34560 2.77935 3.24400 26 - -
|
|
8311 1.38629 1.38629 1.38629 1.38629
|
|
8312 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
|
|
8313 27 0.14656 3.34560 2.77935 3.24400 27 - -
|
|
8314 1.38629 1.38629 1.38629 1.38629
|
|
8315 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
|
|
8316 28 3.39312 0.13508 3.44425 2.79979 28 - -
|
|
8317 1.38629 1.38629 1.38629 1.38629
|
|
8318 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
|
|
8319 29 3.39312 0.13508 3.44425 2.79979 29 - -
|
|
8320 1.38629 1.38629 1.38629 1.38629
|
|
8321 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
|
|
8322 30 3.05375 2.57294 3.10323 0.18440 30 - -
|
|
8323 1.38629 1.38629 1.38629 1.38629
|
|
8324 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
|
|
8325 31 2.92319 3.55246 0.12110 3.45350 31 - -
|
|
8326 1.38629 1.38629 1.38629 1.38629
|
|
8327 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
|
|
8328 32 3.39312 0.13508 3.44425 2.79979 32 - -
|
|
8329 1.38629 1.38629 1.38629 1.38629
|
|
8330 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
|
|
8331 33 2.92319 3.55246 0.12110 3.45350 33 - -
|
|
8332 1.38629 1.38629 1.38629 1.38629
|
|
8333 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
|
|
8334 34 2.92319 3.55246 0.12110 3.45350 34 - -
|
|
8335 1.38629 1.38629 1.38629 1.38629
|
|
8336 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
|
|
8337 35 0.14656 3.34560 2.77935 3.24400 35 - -
|
|
8338 1.38629 1.38629 1.38629 1.38629
|
|
8339 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
|
|
8340 36 0.14656 3.34560 2.77935 3.24400 36 - -
|
|
8341 1.38629 1.38629 1.38629 1.38629
|
|
8342 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
|
|
8343 37 2.92319 3.55246 0.12110 3.45350 37 - -
|
|
8344 1.38629 1.38629 1.38629 1.38629
|
|
8345 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
|
|
8346 38 2.92319 3.55246 0.12110 3.45350 38 - -
|
|
8347 1.38629 1.38629 1.38629 1.38629
|
|
8348 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
|
|
8349 39 0.14656 3.34560 2.77935 3.24400 39 - -
|
|
8350 1.38629 1.38629 1.38629 1.38629
|
|
8351 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
|
|
8352 40 3.05375 2.57294 3.10323 0.18440 40 - -
|
|
8353 1.38629 1.38629 1.38629 1.38629
|
|
8354 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
|
|
8355 41 3.39312 0.13508 3.44425 2.79979 41 - -
|
|
8356 1.38629 1.38629 1.38629 1.38629
|
|
8357 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
|
|
8358 42 0.14656 3.34560 2.77935 3.24400 42 - -
|
|
8359 1.38629 1.38629 1.38629 1.38629
|
|
8360 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
|
|
8361 43 3.05375 2.57294 3.10323 0.18440 43 - -
|
|
8362 1.38629 1.38629 1.38629 1.38629
|
|
8363 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
|
|
8364 44 3.05375 2.57294 3.10323 0.18440 44 - -
|
|
8365 1.38629 1.38629 1.38629 1.38629
|
|
8366 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
|
|
8367 45 2.92319 3.55246 0.12110 3.45350 45 - -
|
|
8368 1.38629 1.38629 1.38629 1.38629
|
|
8369 0.01899 3.97336 * 1.46634 0.26236 0.00000 *
|
|
8370 //
|