itsx: ITSx_db/HMMs/Q.hmm annotate

annotate ITSx_db/HMMs/Q.hmm @ 0:f82c70f54bd7 draft

Uploaded

author	okorol
date	Tue, 24 Mar 2015 12:02:48 -0400
parents
children

rev	line source
0 f82c70f54bd7 Uploaded okorol parents: diff changeset	1 HMMER3/b [3.0 \| March 2010]
f82c70f54bd7 Uploaded okorol parents: diff changeset	2 NAME 3_End_Raphidophyceae_58S_end_one_long
f82c70f54bd7 Uploaded okorol parents: diff changeset	3 LENG 45
f82c70f54bd7 Uploaded okorol parents: diff changeset	4 ALPH DNA
f82c70f54bd7 Uploaded okorol parents: diff changeset	5 RF no
f82c70f54bd7 Uploaded okorol parents: diff changeset	6 CS no
f82c70f54bd7 Uploaded okorol parents: diff changeset	7 MAP yes
f82c70f54bd7 Uploaded okorol parents: diff changeset	8 DATE Thu Jan 19 22:28:09 2012
f82c70f54bd7 Uploaded okorol parents: diff changeset	9 NSEQ 29
f82c70f54bd7 Uploaded okorol parents: diff changeset	10 EFFN 3.345337
f82c70f54bd7 Uploaded okorol parents: diff changeset	11 CKSUM 2540392139
f82c70f54bd7 Uploaded okorol parents: diff changeset	12 STATS LOCAL MSV -8.0627 0.71933
f82c70f54bd7 Uploaded okorol parents: diff changeset	13 STATS LOCAL VITERBI -7.5685 0.71933
f82c70f54bd7 Uploaded okorol parents: diff changeset	14 STATS LOCAL FORWARD -3.8000 0.71933
f82c70f54bd7 Uploaded okorol parents: diff changeset	15 HMM A C G T
f82c70f54bd7 Uploaded okorol parents: diff changeset	16 m->m m->i m->d i->m i->i d->m d->d
f82c70f54bd7 Uploaded okorol parents: diff changeset	17 COMPO 1.72491 1.59887 1.25392 1.09570
f82c70f54bd7 Uploaded okorol parents: diff changeset	18 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	19 0.03673 4.01554 4.01554 1.46634 0.26236 0.00000 *
f82c70f54bd7 Uploaded okorol parents: diff changeset	20 1 3.44143 0.12922 3.49054 2.83505 1 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	21 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	22 0.03673 4.01554 4.01554 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	23 2 0.14094 3.38749 2.80662 3.28984 2 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	24 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	25 0.03673 4.01554 4.01554 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	26 3 3.44143 0.12922 3.49054 2.83505 3 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	27 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	28 0.03673 4.01554 4.01554 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	29 4 3.09591 2.59978 3.14378 0.17750 4 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	30 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	31 0.03673 4.01554 4.01554 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	32 5 3.09591 2.59978 3.14378 0.17750 5 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	33 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	34 0.03673 4.01554 4.01554 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	35 6 3.44143 0.12922 3.49054 2.83505 6 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	36 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	37 0.03673 4.01554 4.01554 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	38 7 3.44143 0.12922 3.49054 2.83505 7 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	39 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	40 0.03673 4.01554 4.01554 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	41 8 2.95256 3.59508 0.11636 3.50051 8 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	42 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	43 0.03673 4.01554 4.01554 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	44 9 2.95256 3.59508 0.11636 3.50051 9 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	45 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	46 0.03673 4.01554 4.01554 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	47 10 2.95256 3.59508 0.11636 3.50051 10 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	48 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	49 0.03673 4.01554 4.01554 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	50 11 0.14094 3.38749 2.80662 3.28984 11 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	51 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	52 0.03673 4.01554 4.01554 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	53 12 3.09591 2.59978 3.14378 0.17750 12 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	54 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	55 0.03673 4.01554 4.01554 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	56 13 0.14094 3.38749 2.80662 3.28984 13 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	57 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	58 0.03673 4.01554 4.01554 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	59 14 3.09591 2.59978 3.14378 0.17750 14 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	60 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	61 0.03673 4.01554 4.01554 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	62 15 3.09591 2.59978 3.14378 0.17750 15 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	63 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	64 0.03673 4.01554 4.01554 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	65 16 3.44143 0.12922 3.49054 2.83505 16 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	66 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	67 0.03673 4.01554 4.01554 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	68 17 3.44143 0.12922 3.49054 2.83505 17 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	69 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	70 0.03673 4.01554 4.01554 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	71 18 3.09591 2.59978 3.14378 0.17750 18 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	72 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	73 0.03673 4.01554 4.01554 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	74 19 2.95256 3.59508 0.11636 3.50051 19 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	75 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	76 0.03673 4.01554 4.01554 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	77 20 2.95256 3.59508 0.11636 3.50051 20 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	78 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	79 0.03673 4.01554 4.01554 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	80 21 2.95256 3.59508 0.11636 3.50051 21 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	81 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	82 0.03673 4.01554 4.01554 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	83 22 0.14094 3.38749 2.80662 3.28984 22 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	84 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	85 0.03673 4.01554 4.01554 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	86 23 2.95256 3.59508 0.11636 3.50051 23 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	87 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	88 0.03673 4.01554 4.01554 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	89 24 3.09591 2.59978 3.14378 0.17750 24 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	90 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	91 0.03673 4.01554 4.01554 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	92 25 0.14094 3.38749 2.80662 3.28984 25 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	93 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	94 0.03673 4.01554 4.01554 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	95 26 3.09591 2.59978 3.14378 0.17750 26 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	96 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	97 0.03673 4.01554 4.01554 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	98 27 2.95256 3.59508 0.11636 3.50051 27 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	99 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	100 0.03673 4.01554 4.01554 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	101 28 3.44143 0.12922 3.49054 2.83505 28 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	102 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	103 0.03673 4.01554 4.01554 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	104 29 3.09591 2.59978 3.14378 0.17750 29 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	105 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	106 0.03673 4.01554 4.01554 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	107 30 3.09591 2.59978 3.14378 0.17750 30 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	108 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	109 0.03673 4.01554 4.01554 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	110 31 2.95256 3.59508 0.11636 3.50051 31 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	111 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	112 0.03673 4.01554 4.01554 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	113 32 3.09591 2.59978 3.14378 0.17750 32 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	114 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	115 0.03673 4.01554 4.01554 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	116 33 3.09591 2.59978 3.14378 0.17750 33 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	117 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	118 0.03673 4.01554 4.01554 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	119 34 0.17548 3.26091 2.52535 3.15686 34 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	120 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	121 0.03673 4.01554 4.01554 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	122 35 2.95256 3.59508 0.11636 3.50051 35 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	123 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	124 0.03673 4.01554 4.01554 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	125 36 0.14094 3.38749 2.80662 3.28984 36 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	126 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	127 0.03673 4.01554 4.01554 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	128 37 2.95256 3.59508 0.11636 3.50051 37 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	129 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	130 0.03673 4.01554 4.01554 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	131 38 3.09591 2.59978 3.14378 0.17750 38 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	132 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	133 0.03673 4.01554 4.01554 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	134 39 2.95256 3.59508 0.11636 3.50051 39 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	135 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	136 0.03673 4.01554 4.01554 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	137 40 3.09591 2.59978 3.14378 0.17750 40 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	138 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	139 0.03673 4.01554 4.01554 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	140 41 3.44143 0.12922 3.49054 2.83505 41 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	141 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	142 0.03673 4.01554 4.01554 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	143 42 3.09591 2.59978 3.14378 0.17750 42 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	144 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	145 0.03673 4.01554 4.01554 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	146 43 2.95256 3.59508 0.11636 3.50051 43 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	147 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	148 0.03673 4.01554 4.01554 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	149 44 3.09591 2.59978 3.14378 0.17750 44 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	150 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	151 0.03673 4.01554 4.01554 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	152 45 3.09591 2.59978 3.14378 0.17750 45 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	153 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	154 0.01854 3.99734 * 1.46634 0.26236 0.00000 *
f82c70f54bd7 Uploaded okorol parents: diff changeset	155 //
f82c70f54bd7 Uploaded okorol parents: diff changeset	156 HMMER3/b [3.0 \| March 2010]
f82c70f54bd7 Uploaded okorol parents: diff changeset	157 NAME 3_End_Raphidophyceae_58S_end_three_long
f82c70f54bd7 Uploaded okorol parents: diff changeset	158 LENG 45
f82c70f54bd7 Uploaded okorol parents: diff changeset	159 ALPH DNA
f82c70f54bd7 Uploaded okorol parents: diff changeset	160 RF no
f82c70f54bd7 Uploaded okorol parents: diff changeset	161 CS no
f82c70f54bd7 Uploaded okorol parents: diff changeset	162 MAP yes
f82c70f54bd7 Uploaded okorol parents: diff changeset	163 DATE Thu Jan 19 22:28:25 2012
f82c70f54bd7 Uploaded okorol parents: diff changeset	164 NSEQ 22
f82c70f54bd7 Uploaded okorol parents: diff changeset	165 EFFN 3.348877
f82c70f54bd7 Uploaded okorol parents: diff changeset	166 CKSUM 1842339946
f82c70f54bd7 Uploaded okorol parents: diff changeset	167 STATS LOCAL MSV -7.9914 0.71933
f82c70f54bd7 Uploaded okorol parents: diff changeset	168 STATS LOCAL VITERBI -7.6624 0.71933
f82c70f54bd7 Uploaded okorol parents: diff changeset	169 STATS LOCAL FORWARD -3.8281 0.71933
f82c70f54bd7 Uploaded okorol parents: diff changeset	170 HMM A C G T
f82c70f54bd7 Uploaded okorol parents: diff changeset	171 m->m m->i m->d i->m i->i d->m d->d
f82c70f54bd7 Uploaded okorol parents: diff changeset	172 COMPO 1.72163 1.59833 1.25283 1.09872
f82c70f54bd7 Uploaded okorol parents: diff changeset	173 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	174 0.03671 4.01618 4.01618 1.46634 0.26236 0.00000 *
f82c70f54bd7 Uploaded okorol parents: diff changeset	175 1 2.95334 3.59622 0.11624 3.50177 1 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	176 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	177 0.03671 4.01618 4.01618 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	178 2 3.44273 0.12907 3.49178 2.83600 2 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	179 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	180 0.03671 4.01618 4.01618 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	181 3 0.14080 3.38861 2.80735 3.29107 3 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	182 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	183 0.03671 4.01618 4.01618 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	184 4 3.44273 0.12907 3.49178 2.83600 4 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	185 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	186 0.03671 4.01618 4.01618 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	187 5 3.09705 2.60051 3.14488 0.17732 5 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	188 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	189 0.03671 4.01618 4.01618 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	190 6 3.09705 2.60051 3.14488 0.17732 6 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	191 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	192 0.03671 4.01618 4.01618 1.46634 0.26236 1.09861 0.40547
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f82c70f54bd7 Uploaded okorol parents: diff changeset	194 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	197 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	200 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	203 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	206 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	208 12 2.96194 2.28365 3.01466 0.22652 12 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	209 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	212 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	213 0.03671 4.01618 4.01618 1.46634 0.26236 1.09861 0.40547
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f82c70f54bd7 Uploaded okorol parents: diff changeset	215 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	216 0.03671 4.01618 4.01618 1.46634 0.26236 1.09861 0.40547
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f82c70f54bd7 Uploaded okorol parents: diff changeset	218 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	219 0.03671 4.01618 4.01618 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	220 16 3.44273 0.12907 3.49178 2.83600 16 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	221 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	222 0.03671 4.01618 4.01618 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	223 17 3.44273 0.12907 3.49178 2.83600 17 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	224 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	225 0.03671 4.01618 4.01618 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	226 18 3.09705 2.60051 3.14488 0.17732 18 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	227 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	228 0.03671 4.01618 4.01618 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	229 19 2.95334 3.59622 0.11624 3.50177 19 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	230 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	231 0.03671 4.01618 4.01618 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	232 20 2.95334 3.59622 0.11624 3.50177 20 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	233 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	234 0.03671 4.01618 4.01618 1.46634 0.26236 1.09861 0.40547
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f82c70f54bd7 Uploaded okorol parents: diff changeset	236 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	237 0.03671 4.01618 4.01618 1.46634 0.26236 1.09861 0.40547
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f82c70f54bd7 Uploaded okorol parents: diff changeset	239 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	240 0.03671 4.01618 4.01618 1.46634 0.26236 1.09861 0.40547
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f82c70f54bd7 Uploaded okorol parents: diff changeset	242 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	243 0.03671 4.01618 4.01618 1.46634 0.26236 1.09861 0.40547
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f82c70f54bd7 Uploaded okorol parents: diff changeset	245 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	246 0.03671 4.01618 4.01618 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	247 25 0.14080 3.38861 2.80735 3.29107 25 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	248 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	249 0.03671 4.01618 4.01618 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	250 26 3.09705 2.60051 3.14488 0.17732 26 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	251 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	252 0.03671 4.01618 4.01618 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	253 27 2.95334 3.59622 0.11624 3.50177 27 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	254 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	255 0.03671 4.01618 4.01618 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	256 28 3.44273 0.12907 3.49178 2.83600 28 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	257 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	258 0.03671 4.01618 4.01618 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	259 29 3.09705 2.60051 3.14488 0.17732 29 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	260 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	261 0.03671 4.01618 4.01618 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	262 30 3.09705 2.60051 3.14488 0.17732 30 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	263 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	264 0.03671 4.01618 4.01618 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	265 31 3.09705 2.60051 3.14488 0.17732 31 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	266 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	267 0.03671 4.01618 4.01618 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	268 32 0.14080 3.38861 2.80735 3.29107 32 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	269 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	270 0.03671 4.01618 4.01618 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	271 33 3.09705 2.60051 3.14488 0.17732 33 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	272 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	273 0.03671 4.01618 4.01618 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	274 34 0.14080 3.38861 2.80735 3.29107 34 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	275 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	276 0.03671 4.01618 4.01618 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	277 35 2.95334 3.59622 0.11624 3.50177 35 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	278 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	279 0.03671 4.01618 4.01618 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	280 36 0.14080 3.38861 2.80735 3.29107 36 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	281 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	282 0.03671 4.01618 4.01618 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	283 37 2.95334 3.59622 0.11624 3.50177 37 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	284 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	285 0.03671 4.01618 4.01618 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	286 38 3.09705 2.60051 3.14488 0.17732 38 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	287 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	288 0.03671 4.01618 4.01618 1.46634 0.26236 1.09861 0.40547
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f82c70f54bd7 Uploaded okorol parents: diff changeset	290 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	291 0.03671 4.01618 4.01618 1.46634 0.26236 1.09861 0.40547
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f82c70f54bd7 Uploaded okorol parents: diff changeset	293 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	294 0.03671 4.01618 4.01618 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	295 41 3.44273 0.12907 3.49178 2.83600 41 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	296 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	297 0.03671 4.01618 4.01618 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	298 42 3.09705 2.60051 3.14488 0.17732 42 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	299 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	300 0.03671 4.01618 4.01618 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	301 43 2.95334 3.59622 0.11624 3.50177 43 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	302 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	303 0.03671 4.01618 4.01618 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	304 44 3.09705 2.60051 3.14488 0.17732 44 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	305 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	306 0.03671 4.01618 4.01618 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	307 45 3.09705 2.60051 3.14488 0.17732 45 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	308 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	309 0.01852 3.99799 * 1.46634 0.26236 0.00000 *
f82c70f54bd7 Uploaded okorol parents: diff changeset	310 //
f82c70f54bd7 Uploaded okorol parents: diff changeset	311 HMMER3/b [3.0 \| March 2010]
f82c70f54bd7 Uploaded okorol parents: diff changeset	312 NAME 3_End_Raphidophyceae_58S_end_two_long
f82c70f54bd7 Uploaded okorol parents: diff changeset	313 LENG 45
f82c70f54bd7 Uploaded okorol parents: diff changeset	314 ALPH DNA
f82c70f54bd7 Uploaded okorol parents: diff changeset	315 RF no
f82c70f54bd7 Uploaded okorol parents: diff changeset	316 CS no
f82c70f54bd7 Uploaded okorol parents: diff changeset	317 MAP yes
f82c70f54bd7 Uploaded okorol parents: diff changeset	318 DATE Thu Jan 19 22:28:17 2012
f82c70f54bd7 Uploaded okorol parents: diff changeset	319 NSEQ 2
f82c70f54bd7 Uploaded okorol parents: diff changeset	320 EFFN 2.000000
f82c70f54bd7 Uploaded okorol parents: diff changeset	321 CKSUM 3536786290
f82c70f54bd7 Uploaded okorol parents: diff changeset	322 STATS LOCAL MSV -7.4659 0.72801
f82c70f54bd7 Uploaded okorol parents: diff changeset	323 STATS LOCAL VITERBI -8.3758 0.72801
f82c70f54bd7 Uploaded okorol parents: diff changeset	324 STATS LOCAL FORWARD -3.4843 0.72801
f82c70f54bd7 Uploaded okorol parents: diff changeset	325 HMM A C G T
f82c70f54bd7 Uploaded okorol parents: diff changeset	326 m->m m->i m->d i->m i->i d->m d->d
f82c70f54bd7 Uploaded okorol parents: diff changeset	327 COMPO 1.92192 1.27826 1.22095 1.27224
f82c70f54bd7 Uploaded okorol parents: diff changeset	328 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	329 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
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f82c70f54bd7 Uploaded okorol parents: diff changeset	378 17 2.81865 0.23582 2.88868 2.35662 17 - -
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f82c70f54bd7 Uploaded okorol parents: diff changeset	418 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	421 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	424 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	427 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	429 34 2.57915 2.25909 2.64442 0.28946 34 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	430 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	433 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	439 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	442 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	445 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	448 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	451 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	454 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	456 43 2.53331 3.02441 0.20344 2.88069 43 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	457 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	458 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	459 44 2.57915 2.25909 2.64442 0.28946 44 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	460 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	461 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	462 45 2.57915 2.25909 2.64442 0.28946 45 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	463 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	464 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
f82c70f54bd7 Uploaded okorol parents: diff changeset	465 //
f82c70f54bd7 Uploaded okorol parents: diff changeset	466 HMMER3/b [3.0 \| March 2010]
f82c70f54bd7 Uploaded okorol parents: diff changeset	467 NAME 2_5.8_Raphidophyceae_58S_start_one_long
f82c70f54bd7 Uploaded okorol parents: diff changeset	468 LENG 45
f82c70f54bd7 Uploaded okorol parents: diff changeset	469 ALPH DNA
f82c70f54bd7 Uploaded okorol parents: diff changeset	470 RF no
f82c70f54bd7 Uploaded okorol parents: diff changeset	471 CS no
f82c70f54bd7 Uploaded okorol parents: diff changeset	472 MAP yes
f82c70f54bd7 Uploaded okorol parents: diff changeset	473 DATE Thu Jan 19 22:20:20 2012
f82c70f54bd7 Uploaded okorol parents: diff changeset	474 NSEQ 55
f82c70f54bd7 Uploaded okorol parents: diff changeset	475 EFFN 3.481140
f82c70f54bd7 Uploaded okorol parents: diff changeset	476 CKSUM 1990027650
f82c70f54bd7 Uploaded okorol parents: diff changeset	477 STATS LOCAL MSV -7.4661 0.71933
f82c70f54bd7 Uploaded okorol parents: diff changeset	478 STATS LOCAL VITERBI -7.6976 0.71933
f82c70f54bd7 Uploaded okorol parents: diff changeset	479 STATS LOCAL FORWARD -4.3165 0.71933
f82c70f54bd7 Uploaded okorol parents: diff changeset	480 HMM A C G T
f82c70f54bd7 Uploaded okorol parents: diff changeset	481 m->m m->i m->d i->m i->i d->m d->d
f82c70f54bd7 Uploaded okorol parents: diff changeset	482 COMPO 1.41421 1.31471 1.35031 1.47329
f82c70f54bd7 Uploaded okorol parents: diff changeset	483 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	484 0.03584 4.03974 4.03974 1.46634 0.26236 0.00000 *
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f82c70f54bd7 Uploaded okorol parents: diff changeset	498 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	620 //
f82c70f54bd7 Uploaded okorol parents: diff changeset	621 HMMER3/b [3.0 \| March 2010]
f82c70f54bd7 Uploaded okorol parents: diff changeset	622 NAME 2_5.8_Raphidophyceae_58S_start_two_long
f82c70f54bd7 Uploaded okorol parents: diff changeset	623 LENG 45
f82c70f54bd7 Uploaded okorol parents: diff changeset	624 ALPH DNA
f82c70f54bd7 Uploaded okorol parents: diff changeset	625 RF no
f82c70f54bd7 Uploaded okorol parents: diff changeset	626 CS no
f82c70f54bd7 Uploaded okorol parents: diff changeset	627 MAP yes
f82c70f54bd7 Uploaded okorol parents: diff changeset	628 DATE Sat Oct 8 23:41:06 2011
f82c70f54bd7 Uploaded okorol parents: diff changeset	629 NSEQ 2
f82c70f54bd7 Uploaded okorol parents: diff changeset	630 EFFN 2.000000
f82c70f54bd7 Uploaded okorol parents: diff changeset	631 CKSUM 4228921988
f82c70f54bd7 Uploaded okorol parents: diff changeset	632 STATS LOCAL MSV -7.5411 0.72814
f82c70f54bd7 Uploaded okorol parents: diff changeset	633 STATS LOCAL VITERBI -8.1860 0.72814
f82c70f54bd7 Uploaded okorol parents: diff changeset	634 STATS LOCAL FORWARD -3.8575 0.72814
f82c70f54bd7 Uploaded okorol parents: diff changeset	635 HMM A C G T
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f82c70f54bd7 Uploaded okorol parents: diff changeset	637 COMPO 1.23782 1.40044 1.49697 1.42842
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f82c70f54bd7 Uploaded okorol parents: diff changeset	639 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
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f82c70f54bd7 Uploaded okorol parents: diff changeset	755 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	761 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	770 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	771 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	772 45 2.81865 0.23582 2.88868 2.35662 45 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	773 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	774 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
f82c70f54bd7 Uploaded okorol parents: diff changeset	775 //
f82c70f54bd7 Uploaded okorol parents: diff changeset	776 HMMER3/b [3.0 \| March 2010]
f82c70f54bd7 Uploaded okorol parents: diff changeset	777 NAME 4_LSU_Raphidophyceae_4_LSU_start_long
f82c70f54bd7 Uploaded okorol parents: diff changeset	778 LENG 45
f82c70f54bd7 Uploaded okorol parents: diff changeset	779 ALPH DNA
f82c70f54bd7 Uploaded okorol parents: diff changeset	780 RF no
f82c70f54bd7 Uploaded okorol parents: diff changeset	781 CS no
f82c70f54bd7 Uploaded okorol parents: diff changeset	782 MAP yes
f82c70f54bd7 Uploaded okorol parents: diff changeset	783 DATE Sat Oct 8 23:57:11 2011
f82c70f54bd7 Uploaded okorol parents: diff changeset	784 NSEQ 23
f82c70f54bd7 Uploaded okorol parents: diff changeset	785 EFFN 3.293335
f82c70f54bd7 Uploaded okorol parents: diff changeset	786 CKSUM 2676057667
f82c70f54bd7 Uploaded okorol parents: diff changeset	787 STATS LOCAL MSV -8.1976 0.71932
f82c70f54bd7 Uploaded okorol parents: diff changeset	788 STATS LOCAL VITERBI -7.6482 0.71932
f82c70f54bd7 Uploaded okorol parents: diff changeset	789 STATS LOCAL FORWARD -3.7861 0.71932
f82c70f54bd7 Uploaded okorol parents: diff changeset	790 HMM A C G T
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f82c70f54bd7 Uploaded okorol parents: diff changeset	792 COMPO 1.06153 1.46136 1.69261 1.43500
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f82c70f54bd7 Uploaded okorol parents: diff changeset	794 0.03709 4.00612 4.00612 1.46634 0.26236 0.00000 *
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f82c70f54bd7 Uploaded okorol parents: diff changeset	832 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	835 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	838 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	844 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	850 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	910 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	913 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	916 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	924 44 3.07909 2.58908 3.12761 0.18022 44 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	925 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	926 0.03709 4.00612 4.00612 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	927 45 0.14315 3.37082 2.79579 3.27159 45 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	928 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	929 0.01872 3.98775 * 1.46634 0.26236 0.00000 *
f82c70f54bd7 Uploaded okorol parents: diff changeset	930 //
f82c70f54bd7 Uploaded okorol parents: diff changeset	931 HMMER3/b [3.0 \| March 2010]
f82c70f54bd7 Uploaded okorol parents: diff changeset	932 NAME 1_SSU_Raphidophyceae_1_SSU_end_long
f82c70f54bd7 Uploaded okorol parents: diff changeset	933 LENG 45
f82c70f54bd7 Uploaded okorol parents: diff changeset	934 ALPH DNA
f82c70f54bd7 Uploaded okorol parents: diff changeset	935 RF no
f82c70f54bd7 Uploaded okorol parents: diff changeset	936 CS no
f82c70f54bd7 Uploaded okorol parents: diff changeset	937 MAP yes
f82c70f54bd7 Uploaded okorol parents: diff changeset	938 DATE Sat Oct 8 23:33:58 2011
f82c70f54bd7 Uploaded okorol parents: diff changeset	939 NSEQ 4
f82c70f54bd7 Uploaded okorol parents: diff changeset	940 EFFN 3.230469
f82c70f54bd7 Uploaded okorol parents: diff changeset	941 CKSUM 805615287
f82c70f54bd7 Uploaded okorol parents: diff changeset	942 STATS LOCAL MSV -8.0211 0.71931
f82c70f54bd7 Uploaded okorol parents: diff changeset	943 STATS LOCAL VITERBI -7.6818 0.71931
f82c70f54bd7 Uploaded okorol parents: diff changeset	944 STATS LOCAL FORWARD -4.1105 0.71931
f82c70f54bd7 Uploaded okorol parents: diff changeset	945 HMM A C G T
f82c70f54bd7 Uploaded okorol parents: diff changeset	946 m->m m->i m->d i->m i->i d->m d->d
f82c70f54bd7 Uploaded okorol parents: diff changeset	947 COMPO 1.27186 1.62653 1.24657 1.44566
f82c70f54bd7 Uploaded okorol parents: diff changeset	948 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	949 0.03752 3.99461 3.99461 1.46634 0.26236 0.00000 *
f82c70f54bd7 Uploaded okorol parents: diff changeset	950 1 0.14592 3.35028 2.78241 3.24912 1 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	951 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	952 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	953 2 2.92650 3.55724 0.12055 3.45877 2 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	954 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	955 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	956 3 3.05845 2.57594 3.10775 0.18362 3 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	957 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	958 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	959 4 3.39853 0.13441 3.44944 2.80375 4 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	960 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	961 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	962 5 2.92650 3.55724 0.12055 3.45877 5 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	963 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	964 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	965 6 3.05845 2.57594 3.10775 0.18362 6 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	966 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	967 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	968 7 0.14592 3.35028 2.78241 3.24912 7 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	969 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	970 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	971 8 0.14592 3.35028 2.78241 3.24912 8 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	972 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	973 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	974 9 3.39853 0.13441 3.44944 2.80375 9 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	975 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	976 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	977 10 0.14592 3.35028 2.78241 3.24912 10 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	978 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	979 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	980 11 0.14592 3.35028 2.78241 3.24912 11 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	981 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	982 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	983 12 2.92650 3.55724 0.12055 3.45877 12 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	984 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	985 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	986 13 2.92650 3.55724 0.12055 3.45877 13 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	987 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	988 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	989 14 3.05845 2.57594 3.10775 0.18362 14 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	990 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	991 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	992 15 3.05845 2.57594 3.10775 0.18362 15 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	993 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	994 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	995 16 3.05845 2.57594 3.10775 0.18362 16 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	996 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	997 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	998 17 3.39853 0.13441 3.44944 2.80375 17 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	999 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	1000 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	1001 18 3.39853 0.13441 3.44944 2.80375 18 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	1002 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	1003 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	1004 19 2.92650 3.55724 0.12055 3.45877 19 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	1005 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	1006 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	1007 20 3.05845 2.57594 3.10775 0.18362 20 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	1008 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	1009 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	1010 21 0.14592 3.35028 2.78241 3.24912 21 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	1011 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	1012 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	1013 22 2.92650 3.55724 0.12055 3.45877 22 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	1014 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	1015 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	1016 23 2.92650 3.55724 0.12055 3.45877 23 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	1017 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	1018 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	1019 24 3.05845 2.57594 3.10775 0.18362 24 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	1020 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	1021 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	1022 25 2.92650 3.55724 0.12055 3.45877 25 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	1023 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	1024 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	1025 26 0.14592 3.35028 2.78241 3.24912 26 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	1026 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	1027 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	1028 27 0.14592 3.35028 2.78241 3.24912 27 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	1029 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	1030 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	1031 28 3.39853 0.13441 3.44944 2.80375 28 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	1032 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	1033 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	1034 29 3.39853 0.13441 3.44944 2.80375 29 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	1035 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	1036 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	1037 30 3.05845 2.57594 3.10775 0.18362 30 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	1038 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	1039 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	1040 31 2.92650 3.55724 0.12055 3.45877 31 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	1041 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	1042 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	1043 32 3.39853 0.13441 3.44944 2.80375 32 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	1044 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	1045 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	1046 33 2.92650 3.55724 0.12055 3.45877 33 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	1047 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	1048 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	1049 34 2.92650 3.55724 0.12055 3.45877 34 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	1050 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	1051 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	1052 35 0.14592 3.35028 2.78241 3.24912 35 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	1053 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	1054 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	1055 36 0.14592 3.35028 2.78241 3.24912 36 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	1056 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	1057 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	1058 37 2.92650 3.55724 0.12055 3.45877 37 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	1059 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	1060 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	1061 38 2.92650 3.55724 0.12055 3.45877 38 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	1062 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	1063 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	1064 39 0.14592 3.35028 2.78241 3.24912 39 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	1065 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	1066 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	1067 40 3.05845 2.57594 3.10775 0.18362 40 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	1068 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	1069 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	1070 41 3.39853 0.13441 3.44944 2.80375 41 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	1071 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	1072 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	1073 42 0.14592 3.35028 2.78241 3.24912 42 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	1074 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	1075 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	1076 43 3.05845 2.57594 3.10775 0.18362 43 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	1077 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	1078 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	1079 44 3.05845 2.57594 3.10775 0.18362 44 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	1080 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	1081 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	1082 45 0.14592 3.35028 2.78241 3.24912 45 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	1083 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	1084 0.01894 3.97602 * 1.46634 0.26236 0.00000 *
f82c70f54bd7 Uploaded okorol parents: diff changeset	1085 //

Mercurial > repos > okorol > itsx

annotate ITSx_db/HMMs/Q.hmm @ 0:f82c70f54bd7 draft