diff rpviz/README.md @ 16:fe78fd6b315a draft

planemo upload commit 87db86a34f2d92eb2c9756bf9ee53ae2970554d5
author pablocarb
date Tue, 11 Jun 2019 11:42:40 -0400
parents
children
line wrap: on
line diff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/rpviz/README.md	Tue Jun 11 11:42:40 2019 -0400
@@ -0,0 +1,18 @@
+# rpviz
+Metabolic engineering visualizer
+
+csv_network.py : To read information from a csv file 
+sbml2list.py : To read information from a sbml file
+
+smile2picture.py : To convert SMILES into svg image
+
+network2json.py : To convert the network in a json file
+
+## 1 html/pathway
+py2html : To create an html file from a json file, using a template (in html/template.html) with jinja2 and to use it with
+
+## 1 html updated for each pathway
+py2html2 : To create a .js file with the json file and to open it with the template2 (in html/template2.html) and the network_viewer.js
+
+nxvisualizer.py : To open the network directly in Cytoscape
+