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annotate rpviz/README.md @ 16:fe78fd6b315a draft

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author pablocarb
date Tue, 11 Jun 2019 11:42:40 -0400
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1 # rpviz
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2 Metabolic engineering visualizer
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4 csv_network.py : To read information from a csv file
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5 sbml2list.py : To read information from a sbml file
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7 smile2picture.py : To convert SMILES into svg image
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9 network2json.py : To convert the network in a json file
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11 ## 1 html/pathway
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12 py2html : To create an html file from a json file, using a template (in html/template.html) with jinja2 and to use it with
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14 ## 1 html updated for each pathway
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15 py2html2 : To create a .js file with the json file and to open it with the template2 (in html/template2.html) and the network_viewer.js
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17 nxvisualizer.py : To open the network directly in Cytoscape
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