Mercurial > repos > portiahollyoak > twobit_to_fasta
comparison twobit_to_fasta.xml @ 1:290689b572b3 draft
planemo upload for repository https://github.com/portiahollyoak/Tools commit c843a15727005c5e5fb47c26a63e80412b62f03a
author | portiahollyoak |
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date | Thu, 28 Apr 2016 08:08:11 -0400 |
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0:977675b747a2 | 1:290689b572b3 |
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1 <tool id ="2bit_to_fasta" name="Convert 2bit to fasta format" version=" 0.1.0"> | |
2 <description></description> | |
3 <requirements> | |
4 <requirement type="package" version="latest">twoBitToFa</requirement> | |
5 </requirements> | |
6 <stdio> | |
7 <exit_code range="1:" /> | |
8 </stdio> | |
9 <command>twoBitToFa "$input1" "$output" </command> | |
10 <inputs> | |
11 <param format="twobit" name="input1" type="data" label="twobit File"/> | |
12 </inputs> | |
13 <outputs> | |
14 <data format="fasta" name="output" /> | |
15 </outputs> | |
16 <tests> | |
17 <test> | |
18 <param name="input1" value="dm3_chr2L.2bit" ftype="twobit"/> | |
19 <output name="output" file="output.fasta"/> | |
20 </test> | |
21 </tests> | |
22 <help> <![CDATA[ | |
23 | |
24 This tool takes an input 2bit file and converts it into fasta format. | |
25 | |
26 ]]> </help> | |
27 </tool> |