Mercurial > repos > portiahollyoak > twobit_to_fasta
diff twobit_to_fasta.xml @ 1:290689b572b3 draft
planemo upload for repository https://github.com/portiahollyoak/Tools commit c843a15727005c5e5fb47c26a63e80412b62f03a
author | portiahollyoak |
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date | Thu, 28 Apr 2016 08:08:11 -0400 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/twobit_to_fasta.xml Thu Apr 28 08:08:11 2016 -0400 @@ -0,0 +1,27 @@ +<tool id ="2bit_to_fasta" name="Convert 2bit to fasta format" version=" 0.1.0"> + <description></description> + <requirements> + <requirement type="package" version="latest">twoBitToFa</requirement> + </requirements> + <stdio> + <exit_code range="1:" /> + </stdio> + <command>twoBitToFa "$input1" "$output" </command> + <inputs> + <param format="twobit" name="input1" type="data" label="twobit File"/> + </inputs> + <outputs> + <data format="fasta" name="output" /> + </outputs> + <tests> + <test> + <param name="input1" value="dm3_chr2L.2bit" ftype="twobit"/> + <output name="output" file="output.fasta"/> + </test> + </tests> + <help> <![CDATA[ + +This tool takes an input 2bit file and converts it into fasta format. + + ]]> </help> +</tool> \ No newline at end of file