Mercurial > repos > proteore > proteore_maps_visualization
comparison tool-data/rno_pathways.loc @ 0:9845dc9c7323 draft
planemo upload commit ad5f1c5a1a71d7fa2bc8bac408856aa80b0fc2a3
| author | proteore |
|---|---|
| date | Tue, 18 Dec 2018 10:02:54 -0500 |
| parents | |
| children |
comparison
equal
deleted
inserted
replaced
| -1:000000000000 | 0:9845dc9c7323 |
|---|---|
| 1 rno00010 Glycolysis / Gluconeogenesis | |
| 2 rno00020 Citrate cycle (TCA cycle) | |
| 3 rno00030 Pentose phosphate pathway | |
| 4 rno00040 Pentose and glucuronate interconversions | |
| 5 rno00051 Fructose and mannose metabolism | |
| 6 rno00052 Galactose metabolism | |
| 7 rno00053 Ascorbate and aldarate metabolism | |
| 8 rno00061 Fatty acid biosynthesis | |
| 9 rno00062 Fatty acid elongation | |
| 10 rno00071 Fatty acid degradation | |
| 11 rno00072 Synthesis and degradation of ketone bodies | |
| 12 rno00100 Steroid biosynthesis | |
| 13 rno00120 Primary bile acid biosynthesis | |
| 14 rno00130 Ubiquinone and other terpenoid-quinone biosynthesis | |
| 15 rno00140 Steroid hormone biosynthesis | |
| 16 rno00190 Oxidative phosphorylation | |
| 17 rno00220 Arginine biosynthesis | |
| 18 rno00230 Purine metabolism | |
| 19 rno00232 Caffeine metabolism | |
| 20 rno00240 Pyrimidine metabolism | |
| 21 rno00250 Alanine, aspartate and glutamate metabolism | |
| 22 rno00260 Glycine, serine and threonine metabolism | |
| 23 rno00270 Cysteine and methionine metabolism | |
| 24 rno00280 Valine, leucine and isoleucine degradation | |
| 25 rno00290 Valine, leucine and isoleucine biosynthesis | |
| 26 rno00310 Lysine degradation | |
| 27 rno00330 Arginine and proline metabolism | |
| 28 rno00340 Histidine metabolism | |
| 29 rno00350 Tyrosine metabolism | |
| 30 rno00360 Phenylalanine metabolism | |
| 31 rno00380 Tryptophan metabolism | |
| 32 rno00400 Phenylalanine, tyrosine and tryptophan biosynthesis | |
| 33 rno00410 beta-Alanine metabolism | |
| 34 rno00430 Taurine and hypotaurine metabolism | |
| 35 rno00440 Phosphonate and phosphinate metabolism | |
| 36 rno00450 Selenocompound metabolism | |
| 37 rno00471 D-Glutamine and D-glutamate metabolism | |
| 38 rno00472 D-Arginine and D-ornithine metabolism | |
| 39 rno00480 Glutathione metabolism | |
| 40 rno00500 Starch and sucrose metabolism | |
| 41 rno00510 N-Glycan biosynthesis | |
| 42 rno00511 Other glycan degradation | |
| 43 rno00512 Mucin type O-glycan biosynthesis | |
| 44 rno00514 Other types of O-glycan biosynthesis | |
| 45 rno00515 Mannose type O-glycan biosynthesis | |
| 46 rno00520 Amino sugar and nucleotide sugar metabolism | |
| 47 rno00524 Neomycin, kanamycin and gentamicin biosynthesis | |
| 48 rno00531 Glycosaminoglycan degradation | |
| 49 rno00532 Glycosaminoglycan biosynthesis | |
| 50 rno00533 Glycosaminoglycan biosynthesis | |
| 51 rno00534 Glycosaminoglycan biosynthesis | |
| 52 rno00561 Glycerolipid metabolism | |
| 53 rno00562 Inositol phosphate metabolism | |
| 54 rno00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis | |
| 55 rno00564 Glycerophospholipid metabolism | |
| 56 rno00565 Ether lipid metabolism | |
| 57 rno00590 Arachidonic acid metabolism | |
| 58 rno00591 Linoleic acid metabolism | |
| 59 rno00592 alpha-Linolenic acid metabolism | |
| 60 rno00600 Sphingolipid metabolism | |
| 61 rno00601 Glycosphingolipid biosynthesis | |
| 62 rno00603 Glycosphingolipid biosynthesis | |
| 63 rno00604 Glycosphingolipid biosynthesis | |
| 64 rno00620 Pyruvate metabolism | |
| 65 rno00630 Glyoxylate and dicarboxylate metabolism | |
| 66 rno00640 Propanoate metabolism | |
| 67 rno00650 Butanoate metabolism | |
| 68 rno00670 One carbon pool by folate | |
| 69 rno00730 Thiamine metabolism | |
| 70 rno00740 Riboflavin metabolism | |
| 71 rno00750 Vitamin B6 metabolism | |
| 72 rno00760 Nicotinate and nicotinamide metabolism | |
| 73 rno00770 Pantothenate and CoA biosynthesis | |
| 74 rno00780 Biotin metabolism | |
| 75 rno00785 Lipoic acid metabolism | |
| 76 rno00790 Folate biosynthesis | |
| 77 rno00830 Retinol metabolism | |
| 78 rno00860 Porphyrin and chlorophyll metabolism | |
| 79 rno00900 Terpenoid backbone biosynthesis | |
| 80 rno00910 Nitrogen metabolism | |
| 81 rno00920 Sulfur metabolism | |
| 82 rno00970 Aminoacyl-tRNA biosynthesis | |
| 83 rno00980 Metabolism of xenobiotics by cytochrome P450 | |
| 84 rno00982 Drug metabolism | |
| 85 rno00983 Drug metabolism | |
| 86 rno01040 Biosynthesis of unsaturated fatty acids | |
| 87 rno01100 Metabolic pathways | |
| 88 rno01200 Carbon metabolism | |
| 89 rno01210 2-Oxocarboxylic acid metabolism | |
| 90 rno01212 Fatty acid metabolism | |
| 91 rno01230 Biosynthesis of amino acids | |
| 92 rno01521 EGFR tyrosine kinase inhibitor resistance | |
| 93 rno01522 Endocrine resistance | |
| 94 rno01523 Antifolate resistance | |
| 95 rno01524 Platinum drug resistance | |
| 96 rno02010 ABC transporters | |
| 97 rno03008 Ribosome biogenesis in eukaryotes | |
| 98 rno03010 Ribosome | |
| 99 rno03013 RNA transport | |
| 100 rno03015 mRNA surveillance pathway | |
| 101 rno03018 RNA degradation | |
| 102 rno03020 RNA polymerase | |
| 103 rno03022 Basal transcription factors | |
| 104 rno03030 DNA replication | |
| 105 rno03040 Spliceosome | |
| 106 rno03050 Proteasome | |
| 107 rno03060 Protein export | |
| 108 rno03320 PPAR signaling pathway | |
| 109 rno03410 Base excision repair | |
| 110 rno03420 Nucleotide excision repair | |
| 111 rno03430 Mismatch repair | |
| 112 rno03440 Homologous recombination | |
| 113 rno03450 Non-homologous end-joining | |
| 114 rno03460 Fanconi anemia pathway | |
| 115 rno04010 MAPK signaling pathway | |
| 116 rno04012 ErbB signaling pathway | |
| 117 rno04014 Ras signaling pathway | |
| 118 rno04015 Rap1 signaling pathway | |
| 119 rno04020 Calcium signaling pathway | |
| 120 rno04022 cGMP-PKG signaling pathway | |
| 121 rno04024 cAMP signaling pathway | |
| 122 rno04060 Cytokine-cytokine receptor interaction | |
| 123 rno04062 Chemokine signaling pathway | |
| 124 rno04064 NF-kappa B signaling pathway | |
| 125 rno04066 HIF-1 signaling pathway | |
| 126 rno04068 FoxO signaling pathway | |
| 127 rno04070 Phosphatidylinositol signaling system | |
| 128 rno04071 Sphingolipid signaling pathway | |
| 129 rno04072 Phospholipase D signaling pathway | |
| 130 rno04080 Neuroactive ligand-receptor interaction | |
| 131 rno04110 Cell cycle | |
| 132 rno04114 Oocyte meiosis | |
| 133 rno04115 p53 signaling pathway | |
| 134 rno04120 Ubiquitin mediated proteolysis | |
| 135 rno04122 Sulfur relay system | |
| 136 rno04130 SNARE interactions in vesicular transport | |
| 137 rno04136 Autophagy | |
| 138 rno04137 Mitophagy | |
| 139 rno04140 Autophagy | |
| 140 rno04141 Protein processing in endoplasmic reticulum | |
| 141 rno04142 Lysosome | |
| 142 rno04144 Endocytosis | |
| 143 rno04145 Phagosome | |
| 144 rno04146 Peroxisome | |
| 145 rno04150 mTOR signaling pathway | |
| 146 rno04151 PI3K-Akt signaling pathway | |
| 147 rno04152 AMPK signaling pathway | |
| 148 rno04210 Apoptosis | |
| 149 rno04211 Longevity regulating pathway | |
| 150 rno04213 Longevity regulating pathway | |
| 151 rno04215 Apoptosis | |
| 152 rno04216 Ferroptosis | |
| 153 rno04217 Necroptosis | |
| 154 rno04218 Cellular senescence | |
| 155 rno04260 Cardiac muscle contraction | |
| 156 rno04261 Adrenergic signaling in cardiomyocytes | |
| 157 rno04270 Vascular smooth muscle contraction | |
| 158 rno04310 Wnt signaling pathway | |
| 159 rno04330 Notch signaling pathway | |
| 160 rno04340 Hedgehog signaling pathway | |
| 161 rno04350 TGF-beta signaling pathway | |
| 162 rno04360 Axon guidance | |
| 163 rno04370 VEGF signaling pathway | |
| 164 rno04371 Apelin signaling pathway | |
| 165 rno04380 Osteoclast differentiation | |
| 166 rno04390 Hippo signaling pathway | |
| 167 rno04392 Hippo signaling pathway | |
| 168 rno04510 Focal adhesion | |
| 169 rno04512 ECM-receptor interaction | |
| 170 rno04514 Cell adhesion molecules (CAMs) | |
| 171 rno04520 Adherens junction | |
| 172 rno04530 Tight junction | |
| 173 rno04540 Gap junction | |
| 174 rno04550 Signaling pathways regulating pluripotency of stem cells | |
| 175 rno04610 Complement and coagulation cascades | |
| 176 rno04611 Platelet activation | |
| 177 rno04612 Antigen processing and presentation | |
| 178 rno04614 Renin-angiotensin system | |
| 179 rno04620 Toll-like receptor signaling pathway | |
| 180 rno04621 NOD-like receptor signaling pathway | |
| 181 rno04622 RIG-I-like receptor signaling pathway | |
| 182 rno04623 Cytosolic DNA-sensing pathway | |
| 183 rno04625 C-type lectin receptor signaling pathway | |
| 184 rno04630 JAK-STAT signaling pathway | |
| 185 rno04640 Hematopoietic cell lineage | |
| 186 rno04650 Natural killer cell mediated cytotoxicity | |
| 187 rno04657 IL-17 signaling pathway | |
| 188 rno04658 Th1 and Th2 cell differentiation | |
| 189 rno04659 Th17 cell differentiation | |
| 190 rno04660 T cell receptor signaling pathway | |
| 191 rno04662 B cell receptor signaling pathway | |
| 192 rno04664 Fc epsilon RI signaling pathway | |
| 193 rno04666 Fc gamma R-mediated phagocytosis | |
| 194 rno04668 TNF signaling pathway | |
| 195 rno04670 Leukocyte transendothelial migration | |
| 196 rno04672 Intestinal immune network for IgA production | |
| 197 rno04710 Circadian rhythm | |
| 198 rno04713 Circadian entrainment | |
| 199 rno04714 Thermogenesis | |
| 200 rno04720 Long-term potentiation | |
| 201 rno04721 Synaptic vesicle cycle | |
| 202 rno04722 Neurotrophin signaling pathway | |
| 203 rno04723 Retrograde endocannabinoid signaling | |
| 204 rno04724 Glutamatergic synapse | |
| 205 rno04725 Cholinergic synapse | |
| 206 rno04726 Serotonergic synapse | |
| 207 rno04727 GABAergic synapse | |
| 208 rno04728 Dopaminergic synapse | |
| 209 rno04730 Long-term depression | |
| 210 rno04740 Olfactory transduction | |
| 211 rno04742 Taste transduction | |
| 212 rno04744 Phototransduction | |
| 213 rno04750 Inflammatory mediator regulation of TRP channels | |
| 214 rno04810 Regulation of actin cytoskeleton | |
| 215 rno04910 Insulin signaling pathway | |
| 216 rno04911 Insulin secretion | |
| 217 rno04912 GnRH signaling pathway | |
| 218 rno04913 Ovarian steroidogenesis | |
| 219 rno04914 Progesterone-mediated oocyte maturation | |
| 220 rno04915 Estrogen signaling pathway | |
| 221 rno04916 Melanogenesis | |
| 222 rno04917 Prolactin signaling pathway | |
| 223 rno04918 Thyroid hormone synthesis | |
| 224 rno04919 Thyroid hormone signaling pathway | |
| 225 rno04920 Adipocytokine signaling pathway | |
| 226 rno04921 Oxytocin signaling pathway | |
| 227 rno04922 Glucagon signaling pathway | |
| 228 rno04923 Regulation of lipolysis in adipocytes | |
| 229 rno04924 Renin secretion | |
| 230 rno04925 Aldosterone synthesis and secretion | |
| 231 rno04926 Relaxin signaling pathway | |
| 232 rno04927 Cortisol synthesis and secretion | |
| 233 rno04928 Parathyroid hormone synthesis, secretion and action | |
| 234 rno04930 Type II diabetes mellitus | |
| 235 rno04931 Insulin resistance | |
| 236 rno04932 Non-alcoholic fatty liver disease (NAFLD) | |
| 237 rno04933 AGE-RAGE signaling pathway in diabetic complications | |
| 238 rno04934 Cushing syndrome | |
| 239 rno04940 Type I diabetes mellitus | |
| 240 rno04950 Maturity onset diabetes of the young | |
| 241 rno04960 Aldosterone-regulated sodium reabsorption | |
| 242 rno04961 Endocrine and other factor-regulated calcium reabsorption | |
| 243 rno04962 Vasopressin-regulated water reabsorption | |
| 244 rno04964 Proximal tubule bicarbonate reclamation | |
| 245 rno04966 Collecting duct acid secretion | |
| 246 rno04970 Salivary secretion | |
| 247 rno04971 Gastric acid secretion | |
| 248 rno04972 Pancreatic secretion | |
| 249 rno04973 Carbohydrate digestion and absorption | |
| 250 rno04974 Protein digestion and absorption | |
| 251 rno04975 Fat digestion and absorption | |
| 252 rno04976 Bile secretion | |
| 253 rno04977 Vitamin digestion and absorption | |
| 254 rno04978 Mineral absorption | |
| 255 rno04979 Cholesterol metabolism | |
| 256 rno05010 Alzheimer disease | |
| 257 rno05012 Parkinson disease | |
| 258 rno05014 Amyotrophic lateral sclerosis (ALS) | |
| 259 rno05016 Huntington disease | |
| 260 rno05020 Prion diseases | |
| 261 rno05030 Cocaine addiction | |
| 262 rno05031 Amphetamine addiction | |
| 263 rno05032 Morphine addiction | |
| 264 rno05033 Nicotine addiction | |
| 265 rno05034 Alcoholism | |
| 266 rno05100 Bacterial invasion of epithelial cells | |
| 267 rno05132 Salmonella infection | |
| 268 rno05133 Pertussis | |
| 269 rno05134 Legionellosis | |
| 270 rno05140 Leishmaniasis | |
| 271 rno05142 Chagas disease (American trypanosomiasis) | |
| 272 rno05143 African trypanosomiasis | |
| 273 rno05144 Malaria | |
| 274 rno05145 Toxoplasmosis | |
| 275 rno05146 Amoebiasis | |
| 276 rno05150 Staphylococcus aureus infection | |
| 277 rno05152 Tuberculosis | |
| 278 rno05160 Hepatitis C | |
| 279 rno05161 Hepatitis B | |
| 280 rno05162 Measles | |
| 281 rno05163 Human cytomegalovirus infection | |
| 282 rno05164 Influenza A | |
| 283 rno05165 Human papillomavirus infection | |
| 284 rno05166 Human T-cell leukemia virus 1 infection | |
| 285 rno05167 Kaposi sarcoma-associated herpesvirus infection | |
| 286 rno05168 Herpes simplex infection | |
| 287 rno05169 Epstein-Barr virus infection | |
| 288 rno05170 Human immunodeficiency virus 1 infection | |
| 289 rno05200 Pathways in cancer | |
| 290 rno05202 Transcriptional misregulation in cancer | |
| 291 rno05203 Viral carcinogenesis | |
| 292 rno05204 Chemical carcinogenesis | |
| 293 rno05205 Proteoglycans in cancer | |
| 294 rno05206 MicroRNAs in cancer | |
| 295 rno05210 Colorectal cancer | |
| 296 rno05211 Renal cell carcinoma | |
| 297 rno05212 Pancreatic cancer | |
| 298 rno05213 Endometrial cancer | |
| 299 rno05214 Glioma | |
| 300 rno05215 Prostate cancer | |
| 301 rno05216 Thyroid cancer | |
| 302 rno05217 Basal cell carcinoma | |
| 303 rno05218 Melanoma | |
| 304 rno05219 Bladder cancer | |
| 305 rno05220 Chronic myeloid leukemia | |
| 306 rno05221 Acute myeloid leukemia | |
| 307 rno05222 Small cell lung cancer | |
| 308 rno05223 Non-small cell lung cancer | |
| 309 rno05224 Breast cancer | |
| 310 rno05225 Hepatocellular carcinoma | |
| 311 rno05226 Gastric cancer | |
| 312 rno05230 Central carbon metabolism in cancer | |
| 313 rno05231 Choline metabolism in cancer | |
| 314 rno05310 Asthma | |
| 315 rno05320 Autoimmune thyroid disease | |
| 316 rno05321 Inflammatory bowel disease (IBD) | |
| 317 rno05322 Systemic lupus erythematosus | |
| 318 rno05323 Rheumatoid arthritis | |
| 319 rno05330 Allograft rejection | |
| 320 rno05332 Graft-versus-host disease | |
| 321 rno05340 Primary immunodeficiency | |
| 322 rno05410 Hypertrophic cardiomyopathy (HCM) | |
| 323 rno05412 Arrhythmogenic right ventricular cardiomyopathy (ARVC) | |
| 324 rno05414 Dilated cardiomyopathy (DCM) | |
| 325 rno05416 Viral myocarditis | |
| 326 rno05418 Fluid shear stress and atherosclerosis |