2
|
1 import os
|
|
2 import sys
|
|
3
|
|
4 paranoid = sys.argv[1]
|
|
5 escape_dates = sys.argv[2]
|
|
6 escape_scinot = sys.argv[3]
|
|
7 escape_leadzero = sys.argv[4]
|
|
8 input_file = sys.argv[5]
|
|
9 output_file = sys.argv[6]
|
|
10
|
|
11 cmd = 'perl /home/bornea/galaxy-apostl-docker/tools/escapeExcel/escape_excel.pl'
|
|
12 if paranoid == 'TRUE':
|
|
13 cmd = cmd + ' --paranoid'
|
|
14 if escape_dates == 'TRUE':
|
|
15 cmd = cmd + ' --no-dates'
|
|
16 if escape_scinot == 'TRUE':
|
|
17 cmd = cmd + ' --no-sci'
|
|
18 if escape_leadzero== 'TRUE':
|
|
19 cmd = cmd + ' --no-zeroes'
|
|
20
|
|
21 cmd = cmd + ' ' + input_file + ' ' + output_file
|
|
22
|
|
23 os.system(cmd)
|