Mercurial > repos > pstew > escape_excel
comparison escape_excel_wrapper.py @ 2:482c23a5abfe draft default tip
Uploaded Python wrapper
author | pstew |
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date | Fri, 17 Feb 2017 16:38:30 -0500 |
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1:7726adcf91c6 | 2:482c23a5abfe |
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1 import os | |
2 import sys | |
3 | |
4 paranoid = sys.argv[1] | |
5 escape_dates = sys.argv[2] | |
6 escape_scinot = sys.argv[3] | |
7 escape_leadzero = sys.argv[4] | |
8 input_file = sys.argv[5] | |
9 output_file = sys.argv[6] | |
10 | |
11 cmd = 'perl /home/bornea/galaxy-apostl-docker/tools/escapeExcel/escape_excel.pl' | |
12 if paranoid == 'TRUE': | |
13 cmd = cmd + ' --paranoid' | |
14 if escape_dates == 'TRUE': | |
15 cmd = cmd + ' --no-dates' | |
16 if escape_scinot == 'TRUE': | |
17 cmd = cmd + ' --no-sci' | |
18 if escape_leadzero== 'TRUE': | |
19 cmd = cmd + ' --no-zeroes' | |
20 | |
21 cmd = cmd + ' ' + input_file + ' ' + output_file | |
22 | |
23 os.system(cmd) |