annotate qiime2__metadata__tabulate.xml @ 3:b833fbd936a7 draft

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date Thu, 25 Apr 2024 21:16:35 +0000
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1 <?xml version='1.0' encoding='utf-8'?>
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2 <!--
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3 Copyright (c) 2024, QIIME 2 development team.
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5 Distributed under the terms of the Modified BSD License. (SPDX: BSD-3-Clause)
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6 -->
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7 <!--
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8 This tool was automatically generated by:
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9 q2galaxy (version: 2024.2.1)
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10 for:
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11 qiime2 (version: 2024.2.0)
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12 -->
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13 <tool name="qiime2 metadata tabulate" id="qiime2__metadata__tabulate" version="2024.2.0+q2galaxy.2024.2.1" profile="22.05" license="BSD-3-Clause">
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14 <description>Interactively explore Metadata in an HTML table</description>
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15 <requirements>
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16 <container type="docker">quay.io/qiime2/amplicon:2024.2</container>
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17 </requirements>
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18 <version_command>q2galaxy version metadata</version_command>
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19 <command detect_errors="exit_code">q2galaxy run metadata tabulate '$inputs'</command>
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20 <configfiles>
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21 <inputs name="inputs" data_style="staging_path_and_source_path"/>
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22 </configfiles>
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23 <inputs>
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24 <repeat name="input" min="1" help="[required] The metadata to tabulate." title="input: Metadata">
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25 <conditional name="__q2galaxy__GUI__conditional__input__">
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26 <param name="type" type="select" label="input: Metadata">
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27 <option value="tsv" selected="true">Metadata from TSV</option>
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28 <option value="qza">Metadata from Artifact</option>
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29 </param>
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30 <when value="tsv">
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31 <param name="source" type="data" format="tabular,qiime2.tabular" label="Metadata Source"/>
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32 </when>
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33 <when value="qza">
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34 <param name="source" type="data" format="qza" label="Metadata Source"/>
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35 </when>
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36 </conditional>
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37 </repeat>
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38 <section name="__q2galaxy__GUI__section__extra_opts__" title="Click here for additional options">
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39 <param name="page_size" type="integer" value="100" label="page_size: Int" help="[default: 100] The maximum number of Metadata records to display per page"/>
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40 </section>
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41 </inputs>
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42 <outputs>
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43 <data name="visualization" format="qzv" label="${tool.name} on ${on_string}: visualization.qzv" from_work_dir="visualization.qzv"/>
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44 </outputs>
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45 <tests/>
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46 <help>
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47 QIIME 2: metadata tabulate
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48 ==========================
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49 Interactively explore Metadata in an HTML table
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50
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52 Outputs:
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53 --------
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54 :visualization.qzv: &lt;no description&gt;
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55
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56 |
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57
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58 Description:
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59 ------------
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60 Generate a tabular view of Metadata. The output visualization supports interactive filtering, sorting, and exporting to common file formats.
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61
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62
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63 |
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64
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65 </help>
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66 <citations>
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67 <citation type="doi">10.1038/s41587-019-0209-9</citation>
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68 </citations>
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69 </tool>