Mercurial > repos > q2d2 > qiime2__phylogeny__filter_tree
changeset 2:97716f0bd25b draft
planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__phylogeny commit 65e4952f33eb335528e8553150e9097e5ea8f556
| author | q2d2 |
|---|---|
| date | Thu, 08 Jun 2023 19:49:48 +0000 |
| parents | 2f35a9736467 |
| children | fbdbfcbe5121 |
| files | qiime2__phylogeny__filter_tree.xml test-data/align_to_tree_mafft_fasttree.test0.rep-seqs.qza |
| diffstat | 2 files changed, 6 insertions(+), 6 deletions(-) [+] |
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--- a/qiime2__phylogeny__filter_tree.xml Fri Jan 13 22:59:02 2023 +0000 +++ b/qiime2__phylogeny__filter_tree.xml Thu Jun 08 19:49:48 2023 +0000 @@ -6,14 +6,14 @@ --> <!-- This tool was automatically generated by: - q2galaxy (version: 2022.11.1) + q2galaxy (version: 2023.5.0) for: - qiime2 (version: 2022.11.1) + qiime2 (version: 2023.5.1) --> -<tool name="qiime2 phylogeny filter-tree" id="qiime2__phylogeny__filter_tree" version="2022.11.1+q2galaxy.2022.11.1.2" profile="22.05" license="BSD-3-Clause"> +<tool name="qiime2 phylogeny filter-tree" id="qiime2__phylogeny__filter_tree" version="2023.5.0+q2galaxy.2023.5.0.2" profile="22.05" license="BSD-3-Clause"> <description>Remove features from tree based on metadata</description> <requirements> - <container type="docker">quay.io/qiime2/core:2022.11</container> + <container type="docker">quay.io/qiime2/core:2023.5</container> </requirements> <version_command>q2galaxy version phylogeny</version_command> <command detect_errors="exit_code">q2galaxy run phylogeny filter_tree '$inputs'</command> @@ -23,8 +23,8 @@ <inputs> <param name="tree" type="data" format="qza" label="tree: Phylogeny[Rooted¹ | Unrooted²]" help="[required] Tree that should be filtered"> <options options_filter_attribute="metadata.semantic_type"> + <filter type="add_value" value="Phylogeny[Rooted]"/> <filter type="add_value" value="Phylogeny[Unrooted]"/> - <filter type="add_value" value="Phylogeny[Rooted]"/> </options> <validator type="expression" message="Incompatible type">hasattr(value.metadata, "semantic_type") and value.metadata.semantic_type in ['Phylogeny[Rooted]', 'Phylogeny[Unrooted]']</validator> </param> @@ -33,8 +33,8 @@ <options options_filter_attribute="metadata.semantic_type"> <filter type="add_value" value="FeatureTable[Frequency]"/> <filter type="add_value" value="FeatureTable[RelativeFrequency]"/> + <filter type="add_value" value="FeatureTable[PresenceAbsence]"/> <filter type="add_value" value="FeatureTable[Composition]"/> - <filter type="add_value" value="FeatureTable[PresenceAbsence]"/> </options> <validator type="expression" message="Incompatible type">hasattr(value.metadata, "semantic_type") and value.metadata.semantic_type in ['FeatureTable[Composition]', 'FeatureTable[Frequency]', 'FeatureTable[PresenceAbsence]', 'FeatureTable[RelativeFrequency]']</validator> </param>