Mercurial > repos > richard-burhans > ncbi_fcs_adaptor
diff notes.txt @ 0:d55ad8533d58 draft default tip
planemo upload for repository https://github.com/richard-burhans/galaxytools/tree/main/tools/ncbi_fcs_adaptor commit 74ccb005520db16be005e6471e8624357aca7d94
author | richard-burhans |
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date | Fri, 01 Mar 2024 18:26:57 +0000 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/notes.txt Fri Mar 01 18:26:57 2024 +0000 @@ -0,0 +1,17 @@ +-rw-r--r-- 1 rico rico 0 Feb 22 20:46 fasta_validation_log.txt +-rw-r--r-- 1 rico rico 15015 Feb 22 20:46 adapter_log.txt +-rw-r--r-- 1 rico rico 1996423 Feb 22 20:46 cleaned.fa +-rw-r--r-- 1 rico rico 36 Feb 22 20:46 adapter_report.tabular + + +<!-- + $DOCKER run --init --name $CONTAINER --user "$(id -u):$(id -g)" -v $FASTA_DIRNAME:/sample-volume/ \ + -v $EXPANDED_OUTPUT:/output-volume/ $DOCKER_IMAGE \ + /app/fcs/bin/av_screen_x -o /output-volume/ $TAX /sample-volume/$FASTA_FILENAME + + singularity run $CONTAINER \ + --bind $FASTA_DIRNAME:/sample-volume/ \ + --bind $EXPANDED_OUTPUT:/output-volume/ \ + $SINGULARITY_IMAGE \ + /app/fcs/bin/av_screen_x -o /output-volume/ $TAX /sample-volume/$FASTA_FILENAME +-->