Mercurial > repos > rnateam > blockbuster
diff tool_dependencies.xml @ 0:6ae946589f04 draft
initial Uploaded
author | rnateam |
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date | Sat, 22 Feb 2014 06:21:02 -0500 |
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children | 0f3d3f9f120f |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_dependencies.xml Sat Feb 22 06:21:02 2014 -0500 @@ -0,0 +1,24 @@ +<?xml version="1.0"?> +<tool_dependency> + <!-- blockbuster seems to have no version number, assuming a really small one --> + <package name="blockbuster" version="0.0.1"> + <install version="1.0"> + <actions> + <action type="download_by_url">https://github.com/bgruening/download_store/raw/master/blockbuster/blockbuster-0.0.1.tar.gz</action> + <action type="shell_command">make</action> + <action type="move_file"> + <source>blockbuster.x</source> + <destination>$INSTALL_DIR/bin</destination> + </action> + <action type="set_environment"> + <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable> + </action> + </actions> + </install> + <readme> + Blockbuster detects blocks of overlapping reads using a gaussian-distribution approach. + GCC is needed to compilte Blockbuster. + http://hoffmann.bioinf.uni-leipzig.de/LIFE/blockbuster.html + </readme> + </package> +</tool_dependency>