Mercurial > repos > rnateam > mafft
comparison test-data/mafft_explicit_amino_blosum80.clustal.aln @ 15:bf28a8cff401 draft
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
| author | bgruening |
|---|---|
| date | Wed, 20 Mar 2024 07:34:52 +0000 |
| parents | |
| children |
comparison
equal
deleted
inserted
replaced
| 14:6f28e90db932 | 15:bf28a8cff401 |
|---|---|
| 1 CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.520) | |
| 2 | |
| 3 | |
| 4 1== ----------------------------------------MN------------------ | |
| 5 2== ----------------------------------------MN------------------ | |
| 6 3== ----------------------------------------MN------------------ | |
| 7 4=p ----------------------------------------MN------------------ | |
| 8 5=p ----------------------------------------MN------------------ | |
| 9 6== ----------------------------------------MK------------------ | |
| 10 7== ----------------------------------------MR------------------ | |
| 11 8=opsin, ------------------------------------------------------------ | |
| 12 9== ----------------------------------------MAQQWSLQRLAGRHPQDS-- | |
| 13 10== ----------------------------------------MAQQWSLQRLAGRHPQDS-- | |
| 14 11== ----------------------------------------MTEAWNVAVFAARRSRDD-- | |
| 15 12== ----------------------------------------MA-AWEAAFAARRRHEE--- | |
| 16 13== ----------------------------------------MS------------------ | |
| 17 14== ----------MESGNVS-------------SSLFGNVSTALR------------------ | |
| 18 15== ----------MEYHNVS-------------SVL-GNVSSVLR------------------ | |
| 19 16== ----------ME-------------------PLCNASEPPLR------------------ | |
| 20 17== ----------MD-------------------ALCNASEPPLR------------------ | |
| 21 18== --------------------------------MTNATGPQMA------------------ | |
| 22 19== --------------------------------MANVTGPQMA------------------ | |
| 23 20== ----------ME---SF-------------AVAAAQLGPHFA------------------ | |
| 24 21== ----------ME---SF-------------AVAAAQLGPHFA------------------ | |
| 25 22== ----------MD---SF-------------AAVATQLGPQFA------------------ | |
| 26 23== -----MERSHLP---ET-------------PFDLAHSGPRFQ------------------ | |
| 27 24== -----MERSLLP---EP-------------PLAMALLGPRFE------------------ | |
| 28 25== --------------------------------MIAVSGPSYE------------------ | |
| 29 26== ----------------------------------MANQLSYS------------------ | |
| 30 27== ---------------------------------------MVE------------------ | |
| 31 28== ----------------------------------------MG------------------ | |
| 32 29== ---------MMDVNSSGRPDLYGHLRSFL-LPEVGRGLPDLSPDGGADPVAG-SWAPHLL | |
| 33 30== -------------------------------------------------------MPHLL | |
| 34 31=p -------------------------------------------------------MPHLL | |
| 35 32== ----------MDVLSP-------------------------------------------- | |
| 36 33=p ----------MDVFSF-------------------------------------------- | |
| 37 34== MANFTFGDLALDVARMG-----GLASTPSGLRSTGLTTPGLSPTGLVTSDFNDSYG---L | |
| 38 35=p MANFTFGDLALDVARMG-----GLASTPSGLRSTGLTTPGLSPTGLVTSDFNDSYG---L | |
| 39 36== -MEGAEGQEELDWEAL-------YLRLP--LQNCSWNSTGWEPNWNVTVVPNTTW----- | |
| 40 | |
| 41 | |
| 42 1== -----GTE--GDN-FYVP----FSNKTGLARSPYEYPQY-YLAEPWK-----------YS | |
| 43 2== -----GTE--GPN-FYVP----FSNITGVVRSPFEQPQY-YLAEPWQ-----------FS | |
| 44 3== -----GTE--GIN-FYVP----MSNKTGVVRSPFEYPQY-YLAEPWK-----------YR | |
| 45 4=p -----GTE--GKN-FYVP----MSNRTGLVRSPFEYPQY-YLAEPWQ-----------FK | |
| 46 5=p -----GTE--GNN-FYVP----LSNRTGLVRSPFEYPQY-YLAEPWQ-----------FK | |
| 47 6== -----QVPEFHED-FYIPIPLDINNLSAY--SPFLVPQD-HLGNQGI-----------FM | |
| 48 7== -----KMS--EEE-FYL-----FKNISSV--GPWDGPQY-HIAPVWA-----------FY | |
| 49 8=opsin, ------------------------------------------------------------ | |
| 50 9== ----YEDSTQSSI-FT------YTNSNST-RGPFEGPNY-HIAPRWV-----------YH | |
| 51 10== ----YEDSTQSSI-FT------YTNSNST-RGPFEGPNY-HIAPRWV-----------YH | |
| 52 11== -----DDTTRGSV-FT------YTNTNNT-RGPFEGPNY-HIAPRWV-----------YN | |
| 53 12== -----EDTTRDSV-FT------YTNSNNT-RGPFEGPNY-HIAPRWV-----------YN | |
| 54 13== -----SNSSQAP-------------PNGT-PGPFDGPQWPYQAPQST-----------YV | |
| 55 14== -----PEARLSA-----------ETRLLGWNVPPEELR--HIPEHWLT--YPEPPESMNY | |
| 56 15== -----PDARLSA-----------ESRLLGWNVPPDELR--HIPEHWLI--YPEPPESMNY | |
| 57 16== -----PEAR-SSG---N-----GDLQFLGWNVPPDQIQ--YIPEHWLT--QLEPPASMHY | |
| 58 17== -----PEARMSSG---S-----DELQFLGWNVPPDQIQ--YIPEHWLT--QLEPPASMHY | |
| 59 18== -----YYGAASMD-FGY-----PEGVSIVDFVRPEIKP--YVHQHWYN--YPPVNPMWHY | |
| 60 19== -----FYGSGAAT-FGY-----PEGMTVADFVPDRVKH--MVLDHWYN--YPPVNPMWHY | |
| 61 20== -----PLS----------------NGSVVDKVTPDMAH--LISPYWNQ--FPAMDPIWAK | |
| 62 21== -----PLS----------------NGSVVDKVTPDMAH--LISPYWNQ--FPAMDPIWAK | |
| 63 22== -----APS----------------NGSVVDKVTPDMAH--LISPYWDQ--FPAMDPIWAK | |
| 64 23== -----AQSSG--------------NGSVLDNVLPDMAH--LVNPYWSR--FAPMDPMMSK | |
| 65 24== -----AQTGG--------------NRSVLDNVLPDMAP--LVNPHWSR--FAPMDPTMSK | |
| 66 25== -----AFSYGGQARF--------NNQTVVDKVPPDMLH--LIDANWYQ--YPPLNPMWHG | |
| 67 26== -----SLGWPYQP-----------NASVVDTMPKEMLY--MIHEHWYA--FPPMNPLWYS | |
| 68 27== -----STTLVNQT-WWY-------NPTVD------------IHPHWAK--FDPIPDAVYY | |
| 69 28== -----RDLRDNET-WWY-------NPSIV------------VHPHWRE--FDQVPDAVYY | |
| 70 29== S---EVTASPAPT-WDAP----PDNASGCGEQIN----------------YGRVE---KV | |
| 71 30== SGFLEVTASPAPT-WDAP----PDNVSGCGEQIN----------------YGRVE---KV | |
| 72 31=p SGFLEVTASPAPT-WDAP----PDNVSGCGEQIN----------------YGRVE---KV | |
| 73 32== -GQGNNTTSPPAP-FET-----GGNTTGISDVT-----------------VSYQ-----V | |
| 74 33=p -GQGNNTTASQEP-FGT-----GGNVTSISDVT-----------------FSYQ-----V | |
| 75 34== TGQFINGSHSSRS-RDNA----SANDTSATNMTDD--------RYWSLTVYSHEH---LV | |
| 76 35=p TGQFINGSHSSRS-RDNA----SANDTSATNMTDD--------RYWSLTVYSHEH---LV | |
| 77 36== -------WQASAP-FDTP----AALVRAAAK----------------------------- | |
| 78 | |
| 79 | |
| 80 1== ALAAYMFFLILVGFPVNFLTLFVTVQHKKLRTPLNYILLNLAMANLFMVLFG-FTVTMYT | |
| 81 2== MLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGG-FTTTLYT | |
| 82 3== LVCCYIFFLISTGLPINLLTLLVTFKHKKLRQPLNYILVNLAVADLFMACFG-FTVTFYT | |
| 83 4=p ILALYLFFLMSMGLPINGLTLVVTAQHKKLRQPLNFILVNLAVAGTIMVCFG-FTVTFYT | |
| 84 5=p LLAVYMFFLICLGLPINGLTLICTAQHKKLRQPLNFILVNLAVAGAIMVCFG-FTVTFYT | |
| 85 6== AMSVFMFFIFIGGASINILTILCTIQFKKLRSHLNYILVNLSIANLFVAIFG-SPLSFYS | |
| 86 7== LQAAFMGTVFLIGFPLNAMVLVATLRYKKLRQPLNYILVNVSFGGFLLCIFS-VFPVFVA | |
| 87 8=opsin, --------------------------------------------DLAETVIA-STISIVN | |
| 88 9== LTSVWMIFVVIASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIA-STISVVN | |
| 89 10== LTSVWMIFVVTASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIA-STISIVN | |
| 90 11== LVSFFMIIVVIASCFTNGLVLVATAKFKKLRHPLNWILVNLAFVDLVETLVA-STISVFN | |
| 91 12== LTSVWMIFVVAASVFTNGLVLVATWKFKKLRHPLNWILVNLAVADLGETVIA-STISVIN | |
| 92 13== GVAVLMGTVVACASVVNGLVIVVSICYKKLRSPLNYILVNLAVADLLVTLCG-SSVSLSN | |
| 93 14== LLGTLYIFFTLMSMLGNGLVIWVFSAAKSLRTPSNILVINLAFCDFMMMVK--TPIFIYN | |
| 94 15== LLGTLYIFFTVISMIGNGLVMWVFSAAKSLRTPSNILVINLAFCDFMMMIK--TPIFIYN | |
| 95 16== MLGVFYIFLFCASTVGNGMVIWIFSTSKSLRTPSNMFVLNLAVFDLIMCLK--APIF--N | |
| 96 17== MLGVFYIFLFFASTLGNGMVIWIFSTSKSLRTPSNMFVLNLAVFDLIMCLK--APIFIYN | |
| 97 18== LLGVIYLFLGTVSIFGNGLVIYLFNKSAALRTPANILVVNLALSDLIMLTTN-VPFFTYN | |
| 98 19== LLGVVYLFLGVISIAGNGLVIYLYMKSQALKTPANMLIVNLALSDLIMLTTN-FPPFCYN | |
| 99 20== ILTAYMIMIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAISDFGIMITN-TPMMGIN | |
| 100 21== ILTAYMIMIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAISDFGIMITN-TPMMGIN | |
| 101 22== ILTAYMIIIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAISDFGIMITN-TPMMGIN | |
| 102 23== ILGLFTLAIMIISCCGNGVVVYIFGGTKSLRTPANLLVLNLAFSDFCMMASQ-SPVMIIN | |
| 103 24== ILGLFTLVILIISCCGNGVVVYIFGGTKSLRTPANLLVLNLAFSDFCMMASQ-SPVMIIN | |
| 104 25== ILGFVIGMLGFVSAMGNGMVVYIFLSTKSLRTPSNLFVINLAISNFLMMFCM-SPPMVIN | |
| 105 26== ILGVAMIILGIICVLGNGMVIYLMMTTKSLRTPTNLLVVNLAFSDFCMMAFM-MPTMTSN | |
| 106 27== SVGIFIGVVGIIGILGNGVVIYLFSKTKSLQTPANMFIINLAMSDLSFSAINGFPLKTIS | |
| 107 28== SLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTIS | |
| 108 29== VIGSILTLITLLTIAGNCLVVISVCFVKKLRQPSNYLIVSLALADLSVAVAV-MPFVSVT | |
| 109 30== VIGSILTLITLLTIAGNCLVVISVSFVKKLRQPSNYLIVSLALADLSVAVAV-MPFVSVT | |
| 110 31=p VIGSILTLITLLTIAGNCLVVISVSFVKKLRQPSNYLIVSLALADLSVAVAV-MPFVSVT | |
| 111 32== ITSLLLGTLIFCAVLGNACVVAAIALERSLQNVANYLIGSLAVTDLMVSVLV-LPMAALY | |
| 112 33=p ITSLLLGTLIFCAVLGNACVVAAIALERSLQNVANYLIGSLAVTDLMVSVLV-LPMAALY | |
| 113 34== LTSVILGLFVLCCIIGNCFVIAAVMLERSLHNVANYLILSLAVADLMVAVLV-MPLSVVS | |
| 114 35=p LTSVILGLFVLCCIIGNCFVIAAVMLERSLHNVANYLILSLAVADLMVAVLV-MPLSVVS | |
| 115 36== --AVVLGLLILATVVGNVFVIAAILLERHLRSAANNLILSLAVADLLVACLV-MPLGAVY | |
| 116 . | |
| 117 | |
| 118 1== SMN-GYFV--FGPTMCSIEGFFATLGGEVALWSLVVLAIERYIVICKPMGN-FRFGNTHA | |
| 119 2== SLH-GYFV--FGPTGCNLEGFFATLGGEIGLWSLVVLAIERYVVVCKPMSN-FRFGENHA | |
| 120 3== AWN-GYFV--FGPVGCAVEGFFATLGGQVALWSLVVLAIERYIVVCKPMGN-FRFSATHA | |
| 121 4=p AIN-GYFV--LGPTGCAVEGFMATLGGEVALWSLVVLAIERYIVVCKPMGS-FKFSSSHA | |
| 122 5=p AIN-GYFA--LGPTGCAVEGFMATLGGEVALWSLVVLAIERYIVVCKPMGS-FKFSSTHA | |
| 123 6== FFN-RYFI--FGATACKIEGFLATLGGMVGLWSLAVVAFERWLVICKPLGN-FTFKTPHA | |
| 124 7== SCN-GYFV--FGRHVCALEGFLGTVAGLVTGWSLAFLAFERYIVICKPFGN-FRFSSKHA | |
| 125 8=opsin, QVS-GYFV--LGHPMCVLEGYTVSLCGITGLWSLAIISWERWLVVCKPFGN-VRFDAKLA | |
| 126 9== QVY-GYFV--LGHPMCVLEGYTVSLCGITGLWSLAIISWERWMVVCKPFGN-VRFDAKLA | |
| 127 10== QVS-GYFV--LGHPMCVLEGYTVSLCGITGLWSLAIISWERWLVVCKPFGN-VRFDAKLA | |
| 128 11== QIF-GYFI--LGHPLCVIEGYVVSSCGITGLWSLAIISWERWFVVCKPFGN-IKFDSKLA | |
| 129 12== QIS-GYFI--LGHPMCVVEGYTVSACGITALWSLAIISWERWFVVCKPFGN-IKFDGKLA | |
| 130 13== NIN-GFFV--FGRRMCELEGFMVSLTGIVGLWSLAILALERYVVVCKPLGD-FQFQRRHA | |
| 131 14== SFH-QGYA--LGHLGCQIFGIIGSYTGIAAGATNAFIAYDRFNVITRPMEG--KMTHGKA | |
| 132 15== SFH-QGYA--LGHLGCQIFGVIGSYTGIAAGATNAFIAYDRYNVITRPMEG--KMTHGKA | |
| 133 16== SFH-RGFAIYLGNTWCQIFASIGSYSGIGAGMTNAAIGYDRYNVITKPMNR--NMTFTKA | |
| 134 17== SFH-RGFA--LGNTWCQIFASIGSYSGIGAGMTNAAIGYDRYNVITKPMNR--NMTFTKA | |
| 135 18== CFSGGVWM--FSPQYCEIYACLGAITGVCSIWLLCMISFDRYNIICNGFNG-PKLTTGKA | |
| 136 19== CFSGGRWM--FSGTYCEIYAALGAITGVCSIWTLCMISFDRYNIICNGFNG-PKLTQGKA | |
| 137 20== LYF-ETWV--LGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAG-RPMTIPLA | |
| 138 21== LYF-ETWV--LGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAG-RPMTIPLA | |
| 139 22== LYF-ETWV--LGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAG-RPMTIPLA | |
| 140 23== FYY-ETWV--LGPLWCDIYAGCGSLFGCVSIWSMCMIAFDRYNVIVKGING-TPMTIKTS | |
| 141 24== FYY-ETWV--LGPLWCDIYAACGSLFGCVSIWSMCMIAFDRYNVIVKGING-TPMTIKTS | |
| 142 25== CYY-ETWV--LGPLFCQIYAMLGSLFGCGSIWTMTMIAFDRYNVIVKGLSG-KPLSINGA | |
| 143 26== CFA-ETWI--LGPFMCEVYGMAGSLFGCASIWSMVMITLDRYNVIVRGMAA-APLTHKKA | |
| 144 27== AFM-KKWI--FGKVACQLYGLLGGIFGFMSINTMAMISIDRYNVIGRPMAASKKMSHRRA | |
| 145 28== CFL-KKWI--FGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRA | |
| 146 29== DLIGGKWI--FGHFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNGKCM | |
| 147 30== DLIGGKWI--FGHFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNGKCM | |
| 148 31=p DLIGGKWI--FGHFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNGKCM | |
| 149 32== QVL-NKWT--LGQVTCDLFIALDVLCCTSSILHLCAIALDRYWAITDPIDYVNKRTPRRA | |
| 150 33=p QVL-NKWT--LGQVTCDLFIALDVLCCTSSILHLCAIALDRYWAITDPIDYVNKRTPRRA | |
| 151 34== EIS-KVWF--LHSEVCDMWISVDVLCCTASILHLVAIAMDRYWAVTS-IDYIRRRSARRI | |
| 152 35=p EIS-KVWF--LHSEVCDMWISVDVLCCTASILHLVAIAMDRYWAVTS-IDYIRRRSARRI | |
| 153 36== EVV-QRWT--LGPELCDMWTSGDVLCCTASILHLVAIALDRYWAVTN-IDYIHASTAKRV | |
| 154 : : * : : :*: : : | |
| 155 | |
| 156 1== IMGVAFTWIMALAC-AAPPLVG-W-----SRYIPEGMQCSCGPDYYTLNPNFNNESYVVY | |
| 157 2== IMGVAFTWVMALAC-AAPPLVG-W-----SRYIPEGMQCSCGIDYYTLKPEVNNESFVIY | |
| 158 3== MMGIAFTWVMAFSC-AAPPLFG-W-----SRYMPEGMQCSCGPDYYTHNPDYHNESYVLY | |
| 159 4=p FAGIAFTWVMALAC-AAPPLFG-W-----SRYIPEGMQCSCGPDYYTLNPDYNNESYVIY | |
| 160 5=p SAGIAFTWVMAMAC-AAPPLVG-W-----SRYIPEGIQCSCGPDYYTLNPEYNNESYVLY | |
| 161 6== IAGCILPWISALAA-SLPPLFG-W-----SRYIPEGLQCSCGPDWYTTNNKYNNESYVMF | |
| 162 7== LTVVLATWTIGIGV-SIPPFFG-W-----SRFIPEGLQCSCGPDWYTVGTKYRSESYTWF | |
| 163 8=opsin, IVGIAFSWIWAAVW-TAPPIFG-W-----SRYWPHGLKTSCGPDVFSGSSYPGVQSYMIV | |
| 164 9== IVGIAFSWIWAAVW-TAPPIFG-W-----SRYWPHGLKTSCGPDVFSGSSYPGVQSYMIV | |
| 165 10== IVGIAFSWIWSAVW-TAPPIFG-W-----SRYWPHGLKTSCGPDVFSGSSYPGVQSYMIV | |
| 166 11== IIGIVFSWVWAWGW-SAPPIFG-W-----SRYWPHGLKTSCGPDVFSGSVELGCQSFMLT | |
| 167 12== VAGILFSWLWSCAW-TAPPIFG-W-----SRYWPHGLKTSCGPDVFSGSSDPGVQSYMVV | |
| 168 13== VSGCAFTWGWALLW-SAPPLLG-W-----SSYVPEGLRTSCGPNWYTGGSNN--NSYILS | |
| 169 14== IAMIIFIYMYATPW-VVACYTETW-----GRFVPEGYLTSCTFDYLT--DNFDTRLFVAC | |
| 170 15== IAMIIFIYLYATPW-VVACYTESW-----GRFVPEGYLTSCTFDYLT--DNFDTRLFVAC | |
| 171 16== VIMNIIIWLYCTPW-VVLPLTQFW-----DRFVPEGYLTSCSFDYLS--DNFDTRLFVGT | |
| 172 17== VIMNIIIWLYCTPW-VVLPLTQFW-----DRFVPEGYLTSCSFDYLS--DNFDTRLFVGT | |
| 173 18== VVFALISWVIAIGC-ALPPFFG-W-----GNYILEGILDSCSYDYLT--QDFNTFSYNIF | |
| 174 19== TFMCGLAWVISVGW-SLPPFFG-W-----GSYTLEGILDSCSYDYFT--RDMNTITYNIC | |
| 175 20== LGKM---------------------------YVPEGNLTSCGIDYLE--RDWNPRSYLIF | |
| 176 21== LGKIAYIWFMSSIW-CLAPAFG-W-----SRYVPEGNLTSCGIDYLE--RDWNPRSYLIF | |
| 177 22== LGKIAYIWFMSTIWCCLAPVFG-W-----SRYVPEGNLTSCGIDYLE--RDWNPRSYLIF | |
| 178 23== IMKILFIWMMAVFW-TVMPLIG-W-----SAYVPEGNLTACSIDYMT--RMWNPRSYLIT | |
| 179 24== IMKIAFIWMMAVFW-TIMPLIG-W-----SSYVPEGNLTACSIDYMT--RQWNPRSYLIT | |
| 180 25== LIRIIAIWLFSLGW-TIAPMFG-W-----NRYVPEGNMTACGTDYFN--RGLLSASYLVC | |
| 181 26== TLLLLFVWIWSGGW-TILPFFG-W-----SRYVPEGNLTSCTVDYLT--KDWSSASYVVI | |
| 182 27== FLMIIFVWMWSIVW-SVGPVFN-W-----GAYVPEGILTSCSFDYLS--TDPSTRSFILC | |
| 183 28== FIMIIFVWLWSVLW-AIGPIFG-W-----GAYTLEGVLCNCSFDYIS--RDSTTRSNILC | |
| 184 29== AKMILSVWLLSASI-TLPPLFG-W-----AQNVNDDKVCLISQDF----------GYTIY | |
| 185 30== AKMILSVWLLSASI-TLPPLFG-W-----AQNVNDDKVCLISQDF----------GYTIY | |
| 186 31=p AKMILSVWLLSASI-TLPPLFG-W-----AQNVNDDKVCLISQDF----------GYTIY | |
| 187 32== AALISLTWLIGFLI-SIPPMLG-WRTPEDRSDPD---ACTISKDH----------GYTIY | |
| 188 33=p AALISLTWLIGFLI-SIPPMLG-WRTPEDRSDPD---ACTISKDH----------GYTIY | |
| 189 34== LLMIMVVWIVALFI-SIPPLFG-WRDP--NNDPDKTGTCIISQDK----------GYTIF | |
| 190 35=p LLMIMVVWIVALFI-SIPPLFG-WRDP--NNDPDKTGTCIISQDK----------GYTIF | |
| 191 36== GMMIACVWTVSFFV-CIAQLLG-WKDPDWNQRVSEDLRCVVSQDV----------GYQIF | |
| 192 : | |
| 193 | |
| 194 1== MFVVHFLVPFVIIFFCYGRLLCTV----KE------------------------------ | |
| 195 2== MFVVHFTIPMIVIFFCYGQLVFTV----KE------------------------------ | |
| 196 3== MFVIHFIIPVVVIFFSYGRLICKV----RE------------------------------ | |
| 197 4=p MFVCHFILPVAVIFFTYGRLVCTV----KA------------------------------ | |
| 198 5=p MFICHFILPVTIIFFTYGRLVCTV----KA------------------------------ | |
| 199 6== LFCFCFAVPFGTIVFCYGQLLITL----KL------------------------------ | |
| 200 7== LFIFCFIVPLSLICFSYTQLLRAL----KA------------------------------ | |
| 201 8=opsin, LMVTCCITPLSIIVLCYLQVWLAI----RA------------------------------ | |
| 202 9== LMVTCCITPLSIIVLCYLQVWLAI----RA------------------------------ | |
| 203 10== LMVTCCIIPLAIIMLCYLQVWLAI----RA------------------------------ | |
| 204 11== LMITCCFLPLFIIIVCYLQVWMAI----RA------------------------------ | |
| 205 12== LMVTCCFFPLAIIILCYLQVWLAI----RA------------------------------ | |
| 206 13== LFVTCFVLPLSLILFSYTNLLLTL----RA------------------------------ | |
| 207 14== IFFFSFVCPTTMITYYYSQIVGHVFSHEKA------------------------------ | |
| 208 15== IFFFSFVCPTTMITYYYSQIVGHVFSHEKA------------------------------ | |
| 209 16== IFFFSFVCPTLMILYYYSQIVGHVFSHEKA------------------------------ | |
| 210 17== IFLFSFVVPTLMILYYYSQIVGHVFNHEKA------------------------------ | |
| 211 18== IFVFDYFLPAAIIVFSYVFIVKAIFAHEAA------------------------------ | |
| 212 19== IFIFDFFLPASVIVFSYVFIVKAIFAHEAA------------------------------ | |
| 213 20== YSIFVYYIPLFLICYSYWFIIAAVSAHEKA------------------------------ | |
| 214 21== YSIFVYYIPLFLICYSYWFIIAAVSAHEKA------------------------------ | |
| 215 22== YSIFVYYIPLFLICYSYWFIIAAVSAHEKA------------------------------ | |
| 216 23== YSLFVYYTPLFLICYSYWFIIAAVAAHEKA------------------------------ | |
| 217 24== YSLFVYYTPLFMICYSYWFIIATVAAHEKA------------------------------ | |
| 218 25== YGIWVYFVPLFLIIYSYWFIIQAVAAHEKN------------------------------ | |
| 219 26== YGLAVYFLPLITMIYCYFFIVHAVAEHEKQ------------------------------ | |
| 220 27== MYFCGFMLPIIIIAFCYFNIVMSVSNHEKE------------------------------ | |
| 221 28== MFILGFFGPILIIFFCYFNIVMSVSNHEKE------------------------------ | |
| 222 29== STAVAFYIPMSVMLFMYYQIYKAARKSAAKHKF-----------------PGF------- | |
| 223 30== STAVAFYIPMSVMLFMYYQIYKAARKSAAKHKF-----------------PGF------- | |
| 224 31=p STAVAFYIPMSVMLFMYYQIYKAARKSAAKHKF-----------------PGF------- | |
| 225 32== STFGAFYIPLLLMLVLYGRIFRAARFRIRK------------------------------ | |
| 226 33=p STFGAFYIPLLLMLVLYGRIFRAARFRIRK------------------------------ | |
| 227 34== STVGAFYLPMLVMMIIYIRIWLVARSRIRKDKFQMTKARLKTEETTLVASPKTEYSVVSD | |
| 228 35=p STVGAFYLPMLVMMIIYIRIWLVARSRIRKDKFQMTKARLKTEETTLVASPKTEYSVVSD | |
| 229 36== ATASSFYVPVLIILILYWRIYQTARKRIR------------------------------- | |
| 230 * : * : | |
| 231 | |
| 232 1== --------------------------AAAAQQ---------------------------- | |
| 233 2== --------------------------AAAQQQ---------------------------- | |
| 234 3== --------------------------AAAQQQ---------------------------- | |
| 235 4=p --------------------------AAAQQQ---------------------------- | |
| 236 5=p --------------------------AAAQQQ---------------------------- | |
| 237 6== --------------------------AAKAQA---------------------------- | |
| 238 7== --------------------------VAAQQQ---------------------------- | |
| 239 8=opsin, --------------------------VAKQQK---------------------------- | |
| 240 9== --------------------------VAKQQK---------------------------- | |
| 241 10== --------------------------VAKQQK---------------------------- | |
| 242 11== --------------------------VAAQQK---------------------------- | |
| 243 12== --------------------------VAAQQK---------------------------- | |
| 244 13== --------------------------AAAQQK---------------------------- | |
| 245 14== --------------------------LRDQAKKM----------------------NVES | |
| 246 15== --------------------------LRDQAKKM----------------------NVDS | |
| 247 16== --------------------------LREQAKKM----------------------NVES | |
| 248 17== --------------------------LREQAKKM----------------------NVES | |
| 249 18== --------------------------MRAQAKKM----------------------NVST | |
| 250 19== --------------------------MRAQAKKM----------------------NVTN | |
| 251 20== --------------------------MREQAKKM----------------------NVKS | |
| 252 21== --------------------------MREQAKKM----------------------NVKS | |
| 253 22== --------------------------MREQAKKM----------------------NVKS | |
| 254 23== --------------------------MREQAKKM----------------------NVKS | |
| 255 24== --------------------------MRDQAKKM----------------------NVKS | |
| 256 25== --------------------------MREQAKKM----------------------NVAS | |
| 257 26== --------------------------LREQAKKM----------------------NVAS | |
| 258 27== --------------------------MAAMAKRL----------------------NAKE | |
| 259 28== --------------------------MAAMAKRL----------------------NAKE | |
| 260 29== --------------------------PRVEPD------------------------SVIA | |
| 261 30== --------------------------PRVQPE------------------------SVIS | |
| 262 31=p --------------------------PRVQPE------------------------SVIS | |
| 263 32== ---------TVKKVEKTGADTRHGASPAPQPKKS-----------VNGESGSR------- | |
| 264 33=p ---------TVRKVEKKGAGTSLGTSSAPPPKKS-----------LNGQPGSG------- | |
| 265 34== CNGCNSPDSTTEKKKRRAPFKSYGCSPRPERKKNRAKKLPENANGVNSNSSS-------- | |
| 266 35=p CNGCNSPDSTTEKKKRRAPFKSYGCSPRPERKKNRAKKLPENANGVNSNSSS-------- | |
| 267 36== --------------RRRGATARGGVGPPP---------VPAGGALVAGGGSGGIAAAVVA | |
| 268 | |
| 269 | |
| 270 1== ------------------------------------------------------------ | |
| 271 2== ------------------------------------------------------------ | |
| 272 3== ------------------------------------------------------------ | |
| 273 4=p ------------------------------------------------------------ | |
| 274 5=p ------------------------------------------------------------ | |
| 275 6== ------------------------------------------------------------ | |
| 276 7== ------------------------------------------------------------ | |
| 277 8=opsin, ------------------------------------------------------------ | |
| 278 9== ------------------------------------------------------------ | |
| 279 10== ------------------------------------------------------------ | |
| 280 11== ------------------------------------------------------------ | |
| 281 12== ------------------------------------------------------------ | |
| 282 13== ------------------------------------------------------------ | |
| 283 14== L----------------------------------------------------------- | |
| 284 15== L----------------------------------------------------------- | |
| 285 16== L----------------------------------------------------------- | |
| 286 17== L----------------------------------------------------------- | |
| 287 18== L----------------------------------------------------------- | |
| 288 19== L----------------------------------------------------------- | |
| 289 20== L----------------------------------------------------------- | |
| 290 21== L----------------------------------------------------------- | |
| 291 22== L----------------------------------------------------------- | |
| 292 23== L----------------------------------------------------------- | |
| 293 24== L----------------------------------------------------------- | |
| 294 25== L----------------------------------------------------------- | |
| 295 26== L----------------------------------------------------------- | |
| 296 27== L----------------------------------------------------------- | |
| 297 28== L----------------------------------------------------------- | |
| 298 29== L-----------------NGIVKLQ--------KEVEECAN------------------L | |
| 299 30== L-----------------NGVVKLQ--------KEVEECAN------------------L | |
| 300 31=p L-----------------NGVVKLQ--------KEVEECAN------------------L | |
| 301 32== --NWRLGVESKAGGALCANGAVRQGDDGAALEVIEVHRVGNSKEHLPLPSEAGPTPCA-- | |
| 302 33=p --DWRRCAENRAVGTPCTNGAVRQGDDEATLEVIEVHRVGNSKEHLPLPSESGSNSYA-- | |
| 303 34== --SERLKQIQIETAEAFANGCA----EEASIAMLERQ-CNNGKKISSNDTPYS------- | |
| 304 35=p --SERLKQIQIETAEAFANGCA----EEASIAMLERQ-CNNGKKISSNDTPYS------- | |
| 305 36== VIGRPLPTISETTTTGFTNVSS----NNTS---PEKQSCANGLEADPPTTGYGAVAAAYY | |
| 306 | |
| 307 | |
| 308 1== --------ESASTQK------AEKEVTRMVVLMVIGFLVCWVPYASVAFYIFT-HQGS-- | |
| 309 2== --------ESATTQK------AEKEVTRMVIIMVIFFLICWLPYASVAMYIFT-HQGS-- | |
| 310 3== --------ESATTQK------AEKEVTRMVILMVLGFMLAWTPYAVVAFWIFT-NKGA-- | |
| 311 4=p --------DSASTQK------AEREVTKMVILMVFGFLIAWTPYATVAAWIFF-NKGA-- | |
| 312 5=p --------DSASTQK------AEREVTKMVILMVLGFLVAWTPYATVAAWIFF-NKGA-- | |
| 313 6== --------DSASTQK------AEREVTKMVVVMVLGFLVCWAPYASFSLWIVS-HRGE-- | |
| 314 7== --------ESATTQK------AEREVSRMVVVMVGSFCVCYVPYAAFAMYMVN-NRNH-- | |
| 315 8=opsin, --------ESESTQK------AEKEVTRMVVVMVLAFC---------------------- | |
| 316 9== --------ESESTQK------AEKEVTRMVVVMVLAFCFCWGPYAFFACFAAA-NPGY-- | |
| 317 10== --------ESESTQK------AEKEVTRMVVVMIFAYCVCWGPYTFFACFAAA-NPGY-- | |
| 318 11== --------ESESTQK------AEREVSRMVVVMIVAFCICWGPYASFVSFAAA-NPGY-- | |
| 319 12== --------ESESTQK------AEKEVSRMVVVMIVAYCFCWGPYTFFACFAAA-NPGY-- | |
| 320 13== --------EADTTQR------AEREVTRMVIVMVMAFLLCWLPYSTFALVVAT-HKGI-- | |
| 321 14== -----RSNVDKNKET------AEIRIAKAAITICFLFFCSWTPYGVMSLIGAF-GDKT-- | |
| 322 15== -----RSNVDKSKEA------AEIRIAKAAITICFLFFASWTPYGVMSLIGAF-GDKT-- | |
| 323 16== -----RSNVDKSKET------AEIRIAKAAITICFLFFVSWTPYGVMSLIGAF-GDKS-- | |
| 324 17== -----RSNVDKSKET------AEIRIAKAAITICFLFFVSWTPYGVMSLIGAF-GDKS-- | |
| 325 18== -----RS-NEADAQR------AEIRIAKTALVNVSLWFICWTPYALISLKGVM-GDTS-- | |
| 326 19== -----RS-NEAETQR------AEIRIAKTALVNVSLWFICWTPYAAITIQGLL-GNAE-- | |
| 327 20== -----RS-SEDAEKS------AEGKLAKVALVTITLWFMAWTPYLVINCMGLF-KF-E-- | |
| 328 21== -----RS-SEDAEKS------AEGKLAKVALVTITLWFMAWTPYLVINCMGLF-KF-E-- | |
| 329 22== -----RS-SEDADKS------AEGKLAKVALVTISLWFMAWTPYLVINCMGLF-KF-E-- | |
| 330 23== -----RS-SEDCDKS------AEGKLAKVALTTISLWFMAWTPYLVICYFGLF-KI-D-- | |
| 331 24== -----RS-SEDCDKS------AENKLAKVALTTISLWFMAWTPYLIICYFGLF-KI-D-- | |
| 332 25== -----RS-SENQNTS------AECKLAKVALMTISLWFMAWTPYLVINFSGIF-NL-V-- | |
| 333 26== -----RANADQQKQS------AECRLAKVAMMTVGLWFMAWTPYLIISWAGVF-SSGT-- | |
| 334 27== -----R--KAQAGAS------AEMKLAKISMVIITQFMLSWSPYAIIALLAQF-GPAE-- | |
| 335 28== -----R--KAQAGAN------AEMRLAKISIVIVSQFLLSWSPYAVVALLAQF-GPLE-- | |
| 336 29== SRLLKHERKNISIFK------REQKAATTLGIIVGAFTVCWLPFFLLSTARPFICGTSCS | |
| 337 30== SRLLKHERKNISIFK------REQKAATTLGIIVGAFTVCWLPFFLLSTARPFICGTSCS | |
| 338 31=p SRLLKHERKNISIFK------REQKAATTLGIIVGAFTVCWLPFFLLSTARPFICGTSCS | |
| 339 32== PASFERKNERNAEAKRKMALARERKTVKTLGIIMGTFILCWLPFFIVALVLPF-CESSC- | |
| 340 33=p PACLERKNERNAEAKRKMALARERKTVKTLGIIMGTFILCWLPFFIVALVLPF-CESSC- | |
| 341 34== ------RTREKLELK------RERKAARTLAIITGAFLICWLPFFIIALIGPF-VDPE-- | |
| 342 35=p ------RTREKLELK------RERKAARTLAIITGAFLICWLPFFIIALIGPF-VDPE-- | |
| 343 36== PSLVRRKPKEAADSK------RERKAAKTLAIITGAFVACWLPFFVLAILVPT-CDCE-- | |
| 344 * . : | |
| 345 | |
| 346 1== DFGATFMTLPAFFAKSSALYNPVIYILMNKQFRNCMITTLCC--------GKNPLGDDE- | |
| 347 2== NFGPIFMTLPAFFAKTASIYNPIIYIMMNKQFRNCMLTSLCC--------GKNPLGDDE- | |
| 348 3== DFTATLMAVPAFFSKSSSLYNPIIYVLMNKQFRNCMITTICC--------GKNPFGDEDV | |
| 349 4=p DFSAKFMAIPAFFSKSSALYNPVIYVLLNKQFRNCMLTTIFC--------GKNPLGDDE- | |
| 350 5=p AFSAQFMAIPAFFSKTSALYNPVIYVLLNKQFRSCMLTTLFC--------GKNPLGDEE- | |
| 351 6== EFDLRMATIPSCLSKASTVYNPVIYVLMNKQFRSCMMKMV-C--------GKN-IEEDE- | |
| 352 7== GLDLRLVTIPSFFSKSACIYNPIIYCFMNKQFQACIMKMV-C--------GKA-MTDES- | |
| 353 8=opsin, ------------------------------------------------------------ | |
| 354 9== PFHPLMAALPAFFAKSATIYNPVIYVFMNRQFRNCILQLF----------GKK-VDDGS- | |
| 355 10== AFHPLMAALPAYFAKSATIYNPVIYVFMNRQFRNCILQLF----------GKK-VDDGS- | |
| 356 11== AFHPLAAALPAYFAKSATIYNPVIYVFMNRQFRNCIMQLF----------GKK-VDDGS- | |
| 357 12== AFHPLAAALPAYFAKSATIYNPIIYVFMNRQFRNCILQLF----------GKK-VDDGS- | |
| 358 13== IIQPVLASLPSYFSKTATVYNPIIYVFMNKQFQSCLLEMLCCG-----YQPQR-TGKAS- | |
| 359 14== LLTPGATMIPACACKMVACIDPFVYAISHPRYRMELQKRCPWLAL---------NEKAP- | |
| 360 15== LLTPGATMIPACTCKMVACIDPFVYAISHPRYRMELQKRCPWLAI---------SEKAP- | |
| 361 16== LLTQGATMIPACTCKLVACIDPFVYAISHPRYRLELQKRCPWLGV---------NEKSG- | |
| 362 17== LLTPGATMIPACTCKLVACIEPFVYAISHPRYRMELQKRCPWLGV---------NEKSG- | |
| 363 18== GITPLVSTLPALLAKSCSCYNPFVYAISHPKYRLAITQHLPWFCV------HE-TETKS- | |
| 364 19== GITPLLTTLPALLAKSCSCYNPFVYAISHPKFRLAITQHLPWFCV------HE-KDPND- | |
| 365 20== GLTPLNTIWGACFAKSAACYNPIVYGISHPKYRLALKEKCPCCVF------GK-VDDGK- | |
| 366 21== GLTPLNTIWGACFAKSAACYNPIVYGISHPKYRLALKEKCPCCVF------GK-VDDGK- | |
| 367 22== GLTPLNTIWGACFAKSAACYNPIVYGISHPKYRLALKEKCPCCVF------GK-VDDGK- | |
| 368 23== GLTPLTTIWGATFAKTSAVYNPIVYGISHPKYRIVLKEKCPMCVF------GN-TDEPK- | |
| 369 24== GLTPLTTIWGATFAKTSAVYNPIVYGISHPNDRLVLKEKCPMCVC------GT-TDEPK- | |
| 370 25== KISPLFTIWGSLFAKANAVYNPIVYGISHPKYRAALFAKFPSLAC-------A-AEPSS- | |
| 371 26== RLTPLATIWGSVFAKANSCYNPIVYGISHPRYKAALYQRFPSLAC------GS-GESGS- | |
| 372 27== WVTPYAAELPVLFAKASAIHNPIVYSVSHPKFREAIQTTFPWLLTCCQFDEKE-CEDAN- | |
| 373 28== WVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTCCQFDDKE-TEDDK- | |
| 374 29== CIPLWVERTFLWLGYANSLINPFIYAFFNRDLRTTYRSLLQCQYR--------------- | |
| 375 30== CIPLWVERTCLWLGYANSLINPFIYAFFNRDLRPTSRSLLQCQYR--------------- | |
| 376 31=p CIPLWVERTCLWLGYANSLINPFIYAFFNRDLRTTYRSLLQCQYR--------------- | |
| 377 32== HMPTLLGAIINWLGYSNSLLNPVIYAYFNKDFQNAFKKIIKCKFC--------------- | |
| 378 33=p HMPALLGAIINWLGYSNSLLNPVIYAYFNKDFQNAFKKIIKCKFC--------------- | |
| 379 34== GIPPFARSFVLWLGYFNSLLNPIIYTIFSPEFRSAFQKILFGKYR--------------- | |
| 380 35=p GIPPFARSFVLWLGYFNSLLNPIIYTIFSPEFRSAFQKILFGKYR--------------- | |
| 381 36== -VSPVLTSLSLWLGYFNSTLNPVIYTVFSPEFRHAFQRLLCGRRV--------------- | |
| 382 | |
| 383 | |
| 384 1== -SGASTSKTEVSSVS-TSPVSPA------------------------------------- | |
| 385 2== -ASATASKTE------TSQVAPA------------------------------------- | |
| 386 3== SSTVSQSKTEVSSVS-SSQVSPA------------------------------------- | |
| 387 4=p SSTVSTSKTEVSS------VSPA------------------------------------- | |
| 388 5=p SSTVSTSKTEVSS------VSPA------------------------------------- | |
| 389 6== -ASTSSQVTQVSS------VAPEK------------------------------------ | |
| 390 7== -DTCSSQKTEVSTVS-STQVGPN------------------------------------- | |
| 391 8=opsin, ------------------------------------------------------------ | |
| 392 9== -ELSSASKTEVSSV---SSVSPA------------------------------------- | |
| 393 10== -ELSSASKTEVSSV---SSVSPA------------------------------------- | |
| 394 11== -EASTTSRTEVSSVS-NSSVAPA------------------------------------- | |
| 395 12== -EVST-SRTEVSSVS-NSSVSPA------------------------------------- | |
| 396 13== -PGTPGPHADVTAAGLRNKVMPAHPV---------------------------------- | |
| 397 14== -ESSAVASTSTTQEP--QQTTAA------------------------------------- | |
| 398 15== -ESRAAISTSTTQEQ--QQTTAA------------------------------------- | |
| 399 16== -EISSAQST-TTQEQ--QQTTAA------------------------------------- | |
| 400 17== -EASSAQST-TTQEQ-TQQTSAA------------------------------------- | |
| 401 18== -NDDSQSNSTVAQDK-A------------------------------------------- | |
| 402 19== -VEENQSSNTQTQEK-S------------------------------------------- | |
| 403 20== -SSDAQSQA-TASEA-ESKA---------------------------------------- | |
| 404 21== -SSDAQSQA-TASEA-ESKA---------------------------------------- | |
| 405 22== -SSEAQSQA-TTSEA-ESKA---------------------------------------- | |
| 406 23== -PDAPASDTETTSEA-DSKA---------------------------------------- | |
| 407 24== -PDAPPSDTETTSEA-ESKD---------------------------------------- | |
| 408 25== -DAVSTTSGTTTVTD-NEKSNA-------------------------------------- | |
| 409 26== -DVKSEASATTTMEE-KPKIPEA------------------------------------- | |
| 410 27== -DAEEEVVASER--G-GESRDAAQMKEMMAMMQKMQAQQAAYQPPPPPQGY--PPQGYPP | |
| 411 28== -DAETEIPAGESSDA-APSADAAQMKEMMAMMQKMQQQQAAY----PPQGYAPPPQGYPP | |
| 412 29== -NINRKLSAAGMHEALKLAERPERPEFVL--------QNADY------------------ | |
| 413 30== -NINRKLSAAGMHEALKLAERPERSEFVL--------QNSDH------------------ | |
| 414 31=p -NINRKLSAAGMHEALKLAERPERSEFVL--------QNSDH------------------ | |
| 415 32== -RQ--------------------------------------------------------- | |
| 416 33=p -RR--------------------------------------------------------- | |
| 417 34== -RGHR------------------------------------------------------- | |
| 418 35=p -RGHR------------------------------------------------------- | |
| 419 36== -RRRRA---------------PQ------------------------------------- | |
| 420 | |
| 421 | |
| 422 1== ---------------------------------------------------- | |
| 423 2== ---------------------------------------------------- | |
| 424 3== ---------------------------------------------------- | |
| 425 4=p ---------------------------------------------------- | |
| 426 5=p ---------------------------------------------------- | |
| 427 6== ---------------------------------------------------- | |
| 428 7== ---------------------------------------------------- | |
| 429 8=opsin, ---------------------------------------------------- | |
| 430 9== ---------------------------------------------------- | |
| 431 10== ---------------------------------------------------- | |
| 432 11== ---------------------------------------------------- | |
| 433 12== ---------------------------------------------------- | |
| 434 13== ---------------------------------------------------- | |
| 435 14== ---------------------------------------------------- | |
| 436 15== ---------------------------------------------------- | |
| 437 16== ---------------------------------------------------- | |
| 438 17== ---------------------------------------------------- | |
| 439 18== ---------------------------------------------------- | |
| 440 19== ---------------------------------------------------- | |
| 441 20== ---------------------------------------------------- | |
| 442 21== ---------------------------------------------------- | |
| 443 22== ---------------------------------------------------- | |
| 444 23== ---------------------------------------------------- | |
| 445 24== ---------------------------------------------------- | |
| 446 25== ---------------------------------------------------- | |
| 447 26== ---------------------------------------------------- | |
| 448 27== QGAYPPPQGYPPQGYPPQGYPPQGYPPQGAPPQVEAPQGAPPQGVDNQAYQA | |
| 449 28== QGY--PPQGYPPQGYPPQGYPP---PPQGAPPQ-GAPPAAPPQGVDNQAYQA | |
| 450 29== ---------------------------------------CRKKGHDS----- | |
| 451 30== ---------------------------------------CGKKGHDT----- | |
| 452 31=p ---------------------------------------CGKKGHDT----- | |
| 453 32== ---------------------------------------------------- | |
| 454 33=p ---------------------------------------------------- | |
| 455 34== ---------------------------------------------------- | |
| 456 35=p ---------------------------------------------------- | |
| 457 36== ---------------------------------------------------- | |
| 458 |