Mercurial > repos > rnateam > rbpbench
diff test-data/test_custom.str_motifs.cm @ 0:7dd2835ce566 draft
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/rbpbench commit 0e21bd630200c1f199db8ba5d83b81d4214fc59f
| author | rnateam |
|---|---|
| date | Sun, 03 Dec 2023 12:51:54 +0000 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/test_custom.str_motifs.cm Sun Dec 03 12:51:54 2023 +0000 @@ -0,0 +1,385 @@ +INFERNAL1/a [1.1.3 | Nov 2019] +NAME Histone3 +ACC RF00032 +DESC Histone 3' UTR stem-loop +STATES 142 +NODES 42 +CLEN 46 +W 57 +ALPH RNA +RF no +CONS yes +MAP yes +DATE Fri Apr 4 13:03:46 2014 +COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED +COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM +PBEGIN 0.05 +PEND 0.05 +WBETA 1e-07 +QDBBETA1 1e-07 +QDBBETA2 1e-15 +N2OMEGA 1.52588e-05 +N3OMEGA 1.52588e-05 +ELSELF -0.08926734 +NSEQ 46 +EFFN 46.000000 +CKSUM 471917655 +NULL 0.000 0.000 0.000 0.000 +GA 25.00 +TC 25.00 +NC 24.90 +EFP7GF -8.9961 0.74543 +ECMLC 0.73248 -4.63583 3.49505 1600000 463131 0.002591 +ECMGC 0.50982 -9.05666 1.92502 1600000 108029 0.003703 +ECMLI 0.86412 -1.32523 4.80439 1600000 239617 0.005008 +ECMGI 0.55516 -6.80684 2.91667 1600000 88393 0.004525 +CM + [ ROOT 0 ] - - - - - - + S 0 -1 0 1 4 1 1 57 76 -10.705 -10.912 -0.004 -9.326 + IL 1 1 2 1 4 1 19 64 83 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 + IR 2 2 3 2 3 1 19 63 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 + [ MATL 1 ] 1 - 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