view test-data/test_custom.str_motifs.cm @ 0:7dd2835ce566 draft

planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/rbpbench commit 0e21bd630200c1f199db8ba5d83b81d4214fc59f
author rnateam
date Sun, 03 Dec 2023 12:51:54 +0000
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INFERNAL1/a [1.1.3 | Nov 2019]
NAME     Histone3
ACC      RF00032
DESC     Histone 3' UTR stem-loop
STATES   142
NODES    42
CLEN     46
W        57
ALPH     RNA
RF       no
CONS     yes
MAP      yes
DATE     Fri Apr  4 13:03:46 2014
COM      [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED
COM      [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM
PBEGIN   0.05
PEND     0.05
WBETA    1e-07
QDBBETA1 1e-07
QDBBETA2 1e-15
N2OMEGA  1.52588e-05
N3OMEGA  1.52588e-05
ELSELF   -0.08926734
NSEQ     46
EFFN     46.000000
CKSUM    471917655
NULL     0.000  0.000  0.000  0.000 
GA       25.00
TC       25.00
NC       24.90
EFP7GF   -8.9961 0.74543
ECMLC    0.73248    -4.63583     3.49505     1600000      463131  0.002591
ECMGC    0.50982    -9.05666     1.92502     1600000      108029  0.003703
ECMLI    0.86412    -1.32523     4.80439     1600000      239617  0.005008
ECMGI    0.55516    -6.80684     2.91667     1600000       88393  0.004525
CM
                                             [ ROOT    0 ]      -      - - - - -
     S     0    -1 0     1     4     1     1    57    76 -10.705 -10.912  -0.004  -9.326                 
    IL     1     1 2     1     4     1    19    64    83  -1.686  -2.369  -1.117  -4.855                  0.000  0.000  0.000  0.000 
    IR     2     2 3     2     3     1    19    63    81  -1.442  -0.798  -4.142                          0.000  0.000  0.000  0.000 
                                             [ MATL    1 ]      1      - c - - -
    ML     3     2 3     5     3     1    19    57    76 -11.622  -0.002 -10.276                          0.274  0.676 -1.683 -0.183 
     D     4     2 3     5     3     0    15    58    76  -6.174  -1.687  -0.566                         
    IL     5     5 3     5     3     1    18    62    80  -1.442  -0.798  -4.142                          0.000  0.000  0.000  0.000 
                                             [ MATL    2 ]      2      - c - - -
    ML     6     5 3     8     3     1    18    56    75 -11.622  -0.002 -10.276                          0.562  0.685 -1.974 -0.595 
     D     7     5 3     8     3     0    15    57    75  -6.174  -1.687  -0.566                         
    IL     8     8 3     8     3     1    17    61    79  -1.442  -0.798  -4.142                          0.000  0.000  0.000  0.000 
                                             [ MATL    3 ]      3      - A - - -
    ML     9     8 3    11     3     1    17    55    74 -11.622  -0.002 -10.276                          1.588 -1.105 -4.684 -1.031 
     D    10     8 3    11     3     0    14    56    74  -6.174  -1.687  -0.566                         
    IL    11    11 3    11     3     1    17    60    78  -1.442  -0.798  -4.142                          0.000  0.000  0.000  0.000 
                                             [ MATL    4 ]      4      - A - - -
    ML    12    11 3    14     3     1    16    54    73 -11.622  -0.002 -10.276                          1.035 -0.025 -1.895 -0.517 
     D    13    11 3    14     3     0    14    55    73  -6.174  -1.687  -0.566                         
    IL    14    14 3    14     3     1    16    59    77  -1.442  -0.798  -4.142                          0.000  0.000  0.000  0.000 
                                             [ MATL    5 ]      5      - a - - -
    ML    15    14 3    17     3     1    15    53    72 -11.923  -0.687  -1.402                          0.970  0.662 -4.530 -1.266 
     D    16    14 3    17     3     0    14    52    71  -5.620  -0.734  -1.403                         
    IL    17    17 3    17     3     1    15    55    73  -1.925  -0.554  -4.164                          0.000  0.000  0.000  0.000 
                                             [ MATR    6 ]      -     47 - U - -
    MR    18    17 3    20     3     1    14    52    71 -11.239  -0.003  -9.556                         -1.280 -3.255 -0.399  1.446 
     D    19    17 3    20     3     0    13    51    70 -11.650  -0.025  -5.880                         
    IR    20    20 3    20     3     1    12    54    72  -1.925  -0.554  -4.164                          0.000  0.000  0.000  0.000 
                                             [ MATR    7 ]      -     46 - g - -
    MR    21    20 3    23     3     1    14    51    70 -11.923  -0.002 -10.241                          0.333 -0.456  0.341 -0.425 
     D    22    20 3    23     3     0     8    50    68  -6.390  -1.568  -0.620                         
    IR    23    23 3    23     3     1    12    53    71  -1.925  -0.554  -4.164                          0.000  0.000  0.000  0.000 
                                             [ MATR    8 ]      -     45 - U - -
    MR    24    23 3    26     3     1    13    50    69 -11.923  -0.002 -10.241                          0.022 -0.397 -2.351  1.021 
     D    25    23 3    26     3     0     7    49    67  -6.390  -1.568  -0.620                         
    IR    26    26 3    26     3     1    11    52    70  -1.925  -0.554  -4.164                          0.000  0.000  0.000  0.000 
                                             [ MATR    9 ]      -     44 - u - -
    MR    27    26 3    29     3     1    12    49    68 -11.923  -0.002 -10.241                          0.188 -0.473 -0.169  0.323 
     D    28    26 3    29     3     0     6    48    66  -6.390  -1.568  -0.620                         
    IR    29    29 3    29     3     1    10    51    69  -1.925  -0.554  -4.164                          0.000  0.000  0.000  0.000 
                                             [ MATR   10 ]      -     43 - u - -
    MR    30    29 3    32     3     1    11    48    67 -11.923  -0.002 -10.241                          0.043 -1.204  0.229  0.448 
     D    31    29 3    32     3     0     5    47    65  -6.390  -1.568  -0.620                         
    IR    32    32 3    32     3     1    10    50    68  -1.925  -0.554  -4.164                          0.000  0.000  0.000  0.000 
                                             [ MATR   11 ]      -     42 - u - -
    MR    33    32 3    35     3     1    10    47    66 -11.923  -0.037  -5.328                          0.283 -0.639 -0.668  0.596 
     D    34    32 3    35     3     0     5    46    64  -6.390  -1.568  -0.620                         
    IR    35    35 3    35     3     1     9    49    67  -1.925  -0.554  -4.164                          0.000  0.000  0.000  0.000 
                                             [ MATR   12 ]      -     41 - a - -
    MR    36    35 3    38     3     1     9    46    65 -11.888  -0.002 -10.205                          0.690 -2.247  0.302 -0.084 
     D    37    35 3    38     3     0     4    45    64  -8.147  -0.315  -2.376                         
    IR    38    38 3    38     3     1     7    48    66  -1.925  -0.554  -4.164                          0.000  0.000  0.000  0.000 
                                             [ MATR   13 ]      -     40 - a - -
    MR    39    38 3    41     3     1     8    45    64 -11.923  -0.002 -10.241                          0.896 -0.277 -0.185 -1.204 
     D    40    38 3    41     3     0     2    44    62  -6.390  -1.568  -0.620                         
    IR    41    41 3    41     3     1     6    47    65  -1.925  -0.554  -4.164                          0.000  0.000  0.000  0.000 
                                             [ MATR   14 ]      -     39 - A - -
    MR    42    41 3    44     3     1     7    44    63 -11.923  -0.002 -10.241                          1.147 -1.015 -0.320 -1.029 
     D    43    41 3    44     3     0     1    43    61  -6.390  -1.568  -0.620                         
    IR    44    44 3    44     3     1     5    46    64  -1.925  -0.554  -4.164                          0.000  0.000  0.000  0.000 
                                             [ MATR   15 ]      -     38 - a - -
    MR    45    44 3    47     3     1     7    43    62 -11.923  -0.027  -5.794                          0.871 -0.426 -0.479 -0.497 
     D    46    44 3    47     3     0     1    42    60  -6.390  -1.568  -0.620                         
    IR    47    47 3    47     3     1     5    45    63  -1.925  -0.554  -4.164                          0.000  0.000  0.000  0.000 
                                             [ MATR   16 ]      -     37 - a - -
    MR    48    47 3    50     3     1     6    42    61 -11.898  -0.002 -10.216                          0.726 -0.863 -0.477  0.109 
     D    49    47 3    50     3     0     0    41    60  -7.823  -0.406  -2.053                         
    IR    50    50 3    50     3     1     3    44    62  -1.925  -0.554  -4.164                          0.000  0.000  0.000  0.000 
                                             [ MATR   17 ]      -     36 - a - -
    MR    51    50 3    53     3     1     5    41    60 -11.923  -0.002 -10.241                          0.725 -1.911 -0.230  0.297 
     D    52    50 3    53     3     0     0    40    58  -6.390  -1.568  -0.620                         
    IR    53    53 3    53     3     1     3    43    61  -1.925  -0.554  -4.164                          0.000  0.000  0.000  0.000 
                                             [ MATR   18 ]      -     35 - a - -
    MR    54    53 3    56     3     1     4    40    59 -11.923  -0.002 -10.241                          0.828 -0.827 -1.719  0.441 
     D    55    53 3    56     3     0     0    39    57  -6.390  -1.568  -0.620                         
    IR    56    56 3    56     3     1     2    42    60  -1.925  -0.554  -4.164                          0.000  0.000  0.000  0.000 
                                             [ MATR   19 ]      -     34 - c - -
    MR    57    56 3    59     3     1     3    39    58 -11.923  -0.002 -10.241                          0.119  0.695 -0.517 -0.745 
     D    58    56 3    59     3     0     0    38    56  -6.390  -1.568  -0.620                         
    IR    59    59 3    59     3     1     2    41    59  -1.925  -0.554  -4.164                          0.000  0.000  0.000  0.000 
                                             [ MATR   20 ]      -     33 - a - -
    MR    60    59 3    62     3     1     2    38    57 -11.923  -0.002 -10.241                          0.569 -0.255 -1.396  0.378 
     D    61    59 3    62     3     0     0    37    55  -6.390  -1.568  -0.620                         
    IR    62    62 3    62     3     1     1    40    58  -1.925  -0.554  -4.164                          0.000  0.000  0.000  0.000 
                                             [ MATR   21 ]      -     32 - u - -
    MR    63    62 3    65     3     1     1    37    56 -11.923  -0.056  -4.714                          0.347 -0.205 -0.853  0.387 
     D    64    62 3    65     3     0     0    36    54  -6.390  -1.568  -0.620                         
    IR    65    65 3    65     3     1     1    39    57  -1.925  -0.554  -4.164                          0.000  0.000  0.000  0.000 
                                             [ MATR   22 ]      -     31 - u - -
    MR    66    65 3    68     3     1     3    36    55 -11.868  -0.002 -10.186                          0.706 -1.486 -1.611  0.752 
     D    67    65 3    68     3     0     0    35    54  -8.618  -0.220  -2.847                         
    IR    68    68 3    68     3     1     1    38    56  -1.925  -0.554  -4.164                          0.000  0.000  0.000  0.000 
                                             [ MATR   23 ]      -     30 - u - -
    MR    69    68 3    71     3     1     2    35    54 -11.923  -0.002 -10.241                         -0.972 -0.369  0.214  0.638 
     D    70    68 3    71     3     0     0    34    52  -6.390  -1.568  -0.620                         
    IR    71    71 3    71     3     1     1    37    55  -1.925  -0.554  -4.164                          0.000  0.000  0.000  0.000 
                                             [ MATR   24 ]      -     29 - A - -
    MR    72    71 3    74     3     1     1    34    53 -11.923  -0.047  -4.982                          1.166 -1.748 -1.275  0.063 
     D    73    71 3    74     3     0     0    33    52  -6.390  -1.568  -0.620                         
    IR    74    74 3    74     3     1     1    36    54  -1.925  -0.554  -4.164                          0.000  0.000  0.000  0.000 
                                             [ MATR   25 ]      -     28 - c - -
    MR    75    74 3    77     3     1     1    33    52 -11.878  -0.002 -10.195                         -0.910  0.584 -0.997  0.554 
     D    76    74 3    77     3     0     0    32    51  -8.406  -0.258  -2.636                         
    IR    77    77 3    77     3     1     1    35    53  -1.925  -0.554  -4.164                          0.000  0.000  0.000  0.000 
                                             [ MATR   26 ]      -     27 - A - -
    MR    78    77 3    80     3     1     1    32    51 -11.923  -0.071  -4.384                          1.458 -1.557 -2.019 -0.586 
     D    79    77 3    80     3     0     0    31    50  -6.390  -1.568  -0.620                         
    IR    80    80 3    80     3     1     1    34    52  -1.925  -0.554  -4.164                          0.000  0.000  0.000  0.000 
                                             [ MATR   27 ]      -     26 - a - -
    MR    81    80 3    83     3     1     1    31    50  -1.344  -0.725 -10.171                          0.698  0.567 -2.058 -0.607 
     D    82    80 3    83     3     0     0    31    49  -0.277  -4.066  -3.118                         
    IR    83    83 3    83     3     1     1    31    49  -6.042  -0.027  -8.281                          0.000  0.000  0.000  0.000 
                                             [ MATR   28 ]      -     24 - c - -
    MR    84    83 3    86     3     1     1    30    48 -11.923  -0.002 -10.241                          0.331  0.903 -2.658 -0.486 
     D    85    83 3    86     3     0     0    29    47  -6.390  -1.568  -0.620                         
    IR    86    86 3    86     3     1     1    31    49  -1.925  -0.554  -4.164                          0.000  0.000  0.000  0.000 
                                             [ MATR   29 ]      -     23 - C - -
    MR    87    86 3    89     3     1     1    29    47 -11.923  -0.002 -10.241                         -2.740  1.578 -5.132 -0.259 
     D    88    86 3    89     3     0     0    28    46  -6.390  -1.568  -0.620                         
    IR    89    89 3    89     3     1     1    30    48  -1.925  -0.554  -4.164                          0.000  0.000  0.000  0.000 
                                             [ MATR   30 ]      -     22 - A - -
    MR    90    89 3    92     5     1     1    28    46 -10.571  -0.003 -10.387 -10.599 -11.491          1.957 -3.517 -6.202 -6.036 
     D    91    89 3    92     5     0     0    27    45  -5.352  -0.707  -2.978  -4.409  -2.404         
    IR    92    92 3    92     5     1     1    28    47  -2.408  -0.496  -5.920  -4.087  -5.193          0.000  0.000  0.000  0.000 
                                             [ MATP   31 ]      6     21 G C - -
    MP    93    92 3    97     6     2     2    27    45 -11.637 -11.577  -0.004 -10.353 -10.633 -11.028 -9.446 -6.202 -11.294 -3.624 -11.134 -7.406 -5.494 -10.940 -7.562  3.944 -7.769 -1.149 -5.842 -7.856 -7.917 -10.190 
    ML    94    92 3    97     6     1     1    26    44  -6.250  -6.596  -1.310  -1.005  -6.446  -3.975  0.368 -0.385 -0.191  0.094 
    MR    95    92 3    97     6     1     1    25    44  -6.988  -5.717  -1.625  -5.695  -0.829  -3.908  0.368 -0.385 -0.191  0.094 
     D    96    92 3    97     6     0     0    23    42  -9.049  -7.747  -3.544  -4.226  -4.244  -0.319 
    IL    97    97 5    97     6     1     1    27    45  -2.579  -2.842  -0.760  -4.497  -5.274  -4.934  0.000  0.000  0.000  0.000 
    IR    98    98 6    98     5     1     1    26    45  -2.408  -0.496  -5.920  -4.087  -5.193          0.000  0.000  0.000  0.000 
                                             [ MATP   32 ]      7     20 G C - -
    MP    99    98 6   103     6     2     2    25    43 -11.637 -11.577  -0.004 -10.353 -10.633 -11.028 -9.520 -6.204 -11.599 -3.658 -11.128 -7.383 -5.483 -11.144 -7.569  3.980 -7.767 -4.127 -5.848 -7.844 -7.915 -10.583 
    ML   100    98 6   103     6     1     1    24    42  -6.250  -6.596  -1.310  -1.005  -6.446  -3.975  0.368 -0.385 -0.191  0.094 
    MR   101    98 6   103     6     1     1    24    42  -6.988  -5.717  -1.625  -5.695  -0.829  -3.908  0.368 -0.385 -0.191  0.094 
     D   102    98 6   103     6     0     0    21    40  -9.049  -7.747  -3.544  -4.226  -4.244  -0.319 
    IL   103   103 5   103     6     1     1    25    43  -2.579  -2.842  -0.760  -4.497  -5.274  -4.934  0.000  0.000  0.000  0.000 
    IR   104   104 6   104     5     1     1    24    43  -2.408  -0.496  -5.920  -4.087  -5.193          0.000  0.000  0.000  0.000 
                                             [ MATP   33 ]      8     19 C G - -
    MP   105   104 6   109     6     2     2    23    41 -11.637 -11.577  -0.004 -10.353 -10.633 -11.028 -8.195 -8.273 -7.664  0.485 -6.102 -7.918  3.494 -6.975 -7.717 -4.266 -7.912 -6.303  1.648 -8.123 -3.772 -6.505 
    ML   106   104 6   109     6     1     1    22    41  -6.250  -6.596  -1.310  -1.005  -6.446  -3.975  0.368 -0.385 -0.191  0.094 
    MR   107   104 6   109     6     1     1    22    41  -6.988  -5.717  -1.625  -5.695  -0.829  -3.908  0.368 -0.385 -0.191  0.094 
     D   108   104 6   109     6     0     0    20    39  -9.049  -7.747  -3.544  -4.226  -4.244  -0.319 
    IL   109   109 5   109     6     1     1    23    41  -2.579  -2.842  -0.760  -4.497  -5.274  -4.934  0.000  0.000  0.000  0.000 
    IR   110   110 6   110     5     1     1    22    41  -2.408  -0.496  -5.920  -4.087  -5.193          0.000  0.000  0.000  0.000 
                                             [ MATP   34 ]      9     18 U A - -
    MP   111   110 6   115     6     2     2    21    39 -11.637 -11.577  -0.004 -10.353 -10.633 -11.028 -7.836 -7.795 -7.436 -3.794 -5.957 -7.798  2.220 -6.790 -7.445  1.323 -7.710 -5.649  3.103 -7.832 -3.590 -6.217 
    ML   112   110 6   115     6     1     1    21    40  -6.250  -6.596  -1.310  -1.005  -6.446  -3.975  0.368 -0.385 -0.191  0.094 
    MR   113   110 6   115     6     1     1    21    40  -6.988  -5.717  -1.625  -5.695  -0.829  -3.908  0.368 -0.385 -0.191  0.094 
     D   114   110 6   115     6     0     0    19    38  -9.049  -7.747  -3.544  -4.226  -4.244  -0.319 
    IL   115   115 5   115     6     1     1    21    40  -2.579  -2.842  -0.760  -4.497  -5.274  -4.934  0.000  0.000  0.000  0.000 
    IR   116   116 6   116     5     1     1    21    39  -2.408  -0.496  -5.920  -4.087  -5.193          0.000  0.000  0.000  0.000 
                                             [ MATP   35 ]     10     17 C G - -
    MP   117   116 6   121     6     2     2    19    37 -11.637 -11.577  -0.004 -10.353 -10.633 -11.028 -8.021 -8.050 -7.554 -4.088 -6.028 -7.856  3.184 -6.884 -7.587  0.019 -7.815 -5.994  2.506 -7.979 -3.679 -6.365 
    ML   118   116 6   121     6     1     1    21    39  -6.250  -6.596  -1.310  -1.005  -6.446  -3.975  0.368 -0.385 -0.191  0.094 
    MR   119   116 6   121     6     1     1    20    39  -6.988  -5.717  -1.625  -5.695  -0.829  -3.908  0.368 -0.385 -0.191  0.094 
     D   120   116 6   121     6     0     0    19    38  -9.049  -7.747  -3.544  -4.226  -4.244  -0.319 
    IL   121   121 5   121     6     1     1    20    39  -2.579  -2.842  -0.760  -4.497  -5.274  -4.934  0.000  0.000  0.000  0.000 
    IR   122   122 6   122     5     1     1    20    38  -2.408  -0.496  -5.920  -4.087  -5.193          0.000  0.000  0.000  0.000 
                                             [ MATP   36 ]     11     16 U A - -
    MP   123   122 6   127     4     2     2    17    35 -10.705 -10.912  -0.004  -9.326                 -8.498 -8.756 -7.833 -4.969 -6.193 -7.989  1.976 -7.104 -7.931 -4.927 -8.060 -7.105  3.379 -8.342  0.623 -6.731 
    ML   124   122 6   127     4     1     1    20    39  -3.758  -3.940  -0.507  -2.670                  0.368 -0.385 -0.191  0.094 
    MR   125   122 6   127     4     1     1    20    38  -4.809  -3.838  -1.706  -0.766                  0.368 -0.385 -0.191  0.094 
     D   126   122 6   127     4     0     0    19    37  -4.568  -4.250  -2.265  -0.520                 
    IL   127   127 5   127     4     1     1    22    40  -1.686  -2.369  -1.117  -4.855                  0.000  0.000  0.000  0.000 
    IR   128   128 6   128     3     1     1    21    39  -1.442  -0.798  -4.142                          0.000  0.000  0.000  0.000 
                                             [ MATL   37 ]     12      - U - - -
    ML   129   128 6   131     3     1     1    14    32 -11.622  -0.002 -10.276                          0.104 -1.394 -4.333  1.319 
     D   130   128 6   131     3     0     0    16    34  -6.174  -1.687  -0.566                         
    IL   131   131 3   131     3     1     1    20    38  -1.442  -0.798  -4.142                          0.000  0.000  0.000  0.000 
                                             [ MATL   38 ]     13      - U - - -
    ML   132   131 3   134     3     1     1    12    31 -11.622  -0.002 -10.276                         -2.505  0.463 -5.033  1.272 
     D   133   131 3   134     3     0     0    15    33  -6.174  -1.687  -0.566                         
    IL   134   134 3   134     3     1     1    19    37  -1.442  -0.798  -4.142                          0.000  0.000  0.000  0.000 
                                             [ MATL   39 ]     14      - U - - -
    ML   135   134 3   137     3     1     1    11    29 -11.622  -0.002 -10.276                         -7.616 -6.858 -8.607  1.994 
     D   136   134 3   137     3     0     0    13    32  -6.174  -1.687  -0.566                         
    IL   137   137 3   137     3     1     1    18    36  -1.442  -0.798  -4.142                          0.000  0.000  0.000  0.000 
                                             [ MATL   40 ]     15      - a - - -
    ML   138   137 3   140     2     1     1     1     1       *   0.000                                  0.741  0.478 -2.313 -0.445 
     D   139   137 3   140     2     0     0     0     0       *   0.000                                 
    IL   140   140 3   140     2     1     1    13    28  -1.823  -0.479                                  0.000  0.000  0.000  0.000 
                                             [ END    41 ]      -      - - - - -
     E   141   140 3    -1     0     0     0     0     0                                                 
//
HMMER3/f [3.3 | Nov 2019]
NAME  Histone3
ACC   RF00032
DESC  Histone 3' UTR stem-loop
LENG  46
MAXL  102
ALPH  RNA
RF    no
MM    no
CONS  yes
CS    yes
MAP   yes
DATE  Fri Apr  4 13:03:46 2014
COM   [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED
NSEQ  46
EFFN  42.133911
CKSUM 471917655
STATS LOCAL MSV       -8.1088  0.74543
STATS LOCAL VITERBI   -8.5088  0.74543
STATS LOCAL FORWARD   -3.2029  0.74543
HMM          A        C        G        U   
            m->m     m->i     m->d     i->m     i->i     d->m     d->d
  COMPO   1.16847  1.39084  1.71368  1.34673
          1.38629  1.38629  1.38629  1.38629
          0.00416  6.17794  6.17794  1.46634  0.26236  0.00000        *
      1   1.19718  0.92283  2.53752  1.50734      1 c - - :
          1.38629  1.38629  1.38629  1.38629
          0.00416  6.17794  6.17794  1.46634  0.26236  1.09861  0.40547
      2   0.99976  0.91709  2.73454  1.78721      2 c - - :
          1.38629  1.38629  1.38629  1.38629
          0.00416  6.17794  6.17794  1.46634  0.26236  1.09861  0.40547
      3   0.28707  2.15200  4.53977  2.09870      3 A - - :
          1.38629  1.38629  1.38629  1.38629
          0.00416  6.17794  6.17794  1.46634  0.26236  1.09861  0.40547
      4   0.67303  1.40667  2.67938  1.73570      4 A - - :
          1.38629  1.38629  1.38629  1.38629
          0.00416  6.17794  6.17794  1.46634  0.26236  1.09861  0.40547
      5   0.71631  0.93175  4.42267  2.24827      5 a - - :
          1.38629  1.38629  1.38629  1.38629
          0.00416  6.17794  6.17794  1.46634  0.26236  1.09861  0.40547
      6   4.96323  6.10024  0.01150  6.11805      6 G - - <
          1.38629  1.38629  1.38629  1.38629
          0.00416  6.17794  6.17794  1.46634  0.26236  1.09861  0.40547
      7   4.97477  6.07793  0.01151  6.10217      7 G - - <
          1.38629  1.38629  1.38629  1.38629
          0.00416  6.17794  6.17794  1.46634  0.26236  1.09861  0.40547
      8   2.42219  0.35197  5.16373  1.59825      8 C - - <
          1.38629  1.38629  1.38629  1.38629
          0.00416  6.17794  6.17794  1.46634  0.26236  1.09861  0.40547
      9   4.96709  1.22589  1.84282  0.61402      9 U - - <
          1.38629  1.38629  1.38629  1.38629
          0.00416  6.17794  6.17794  1.46634  0.26236  1.09861  0.40547
     10   5.14332  0.56593  2.72176  1.02007     10 C - - <
          1.38629  1.38629  1.38629  1.38629
          0.00416  6.17794  6.17794  1.46634  0.26236  1.09861  0.40547
     11   5.65512  1.39382  5.58556  0.29488     11 U - - <
          1.38629  1.38629  1.38629  1.38629
          0.00416  6.17794  6.17794  1.46634  0.26236  1.09861  0.40547
     12   1.31706  2.34288  4.27893  0.47454     12 U - - _
          1.38629  1.38629  1.38629  1.38629
          0.00416  6.17794  6.17794  1.46634  0.26236  1.09861  0.40547
     13   3.10136  1.06700  4.79001  0.50640     13 U - - _
          1.38629  1.38629  1.38629  1.38629
          0.00416  6.17794  6.17794  1.46634  0.26236  1.09861  0.40547
     14   6.52235  6.01860  7.19543  0.00466     14 U - - _
          1.38629  1.38629  1.38629  1.38629
          0.00416  6.17794  6.17794  1.46634  0.26236  1.09861  0.40547
     15   0.87615  1.05939  2.96086  1.68645     15 a - - _
          1.38629  1.38629  1.38629  1.38629
          0.00416  6.17794  6.17794  1.46634  0.26236  1.09861  0.40547
     16   0.43199  5.71946  1.06961  5.43487     16 A - - >
          1.38629  1.38629  1.38629  1.38629
          0.00416  6.17794  6.17794  1.46634  0.26236  1.09861  0.40547
     17   1.03329  2.73783  0.55849  4.90865     17 G - - >
          1.38629  1.38629  1.38629  1.38629
          0.00416  6.17794  6.17794  1.46634  0.26236  1.09861  0.40547
     18   0.62348  1.85123  1.21052  4.72873     18 A - - >
          1.38629  1.38629  1.38629  1.38629
          0.00416  6.17794  6.17794  1.46634  0.26236  1.09861  0.40547
     19   1.62037  5.32794  0.34630  2.40773     19 G - - >
          1.38629  1.38629  1.38629  1.38629
          0.00416  6.17794  6.17794  1.46634  0.26236  1.09861  0.40547
     20   6.16935  0.01425  6.02393  4.64210     20 C - - >
          1.38629  1.38629  1.38629  1.38629
          0.00416  6.17794  6.17794  1.46634  0.26236  1.09861  0.40547
     21   6.22221  0.03904  6.06094  3.38213     21 C - - >
          1.38629  1.38629  1.38629  1.38629
          0.00416  6.17794  6.17794  1.46634  0.26236  1.09861  0.40547
     22   0.03027  3.82336  5.58493  5.47058     22 A - - :
          1.38629  1.38629  1.38629  1.38629
          0.00416  6.17794  6.17794  1.46634  0.26236  1.09861  0.40547
     23   3.26053  0.29487  4.86483  1.56402     23 C - - :
          1.38629  1.38629  1.38629  1.38629
          0.00416  6.17794  6.17794  1.46634  0.26236  1.09861  0.40547
     24   1.15929  0.76514  3.19669  1.71411     24 c - - :
          1.38629  1.38629  1.38629  1.38629
          0.47612  0.97621  6.17794  0.01098  4.51736  1.09861  0.40547
     25   0.90589  0.99871  2.78941  1.79574     26 a - - :
          1.38629  1.38629  1.38629  1.38629
          0.00416  6.17794  6.17794  1.46634  0.26236  1.09861  0.40547
     26   0.37936  2.45545  2.76975  1.78857     27 A - - :
          1.38629  1.38629  1.38629  1.38629
          0.03553  6.17794  3.41622  1.46634  0.26236  1.09861  0.40547
     27   2.00288  0.98595  2.07379  1.00440     28 c - - :
          1.38629  1.38629  1.38629  1.38629
          0.00429  6.14670  6.14670  1.46634  0.26236  0.11900  2.18757
     28   0.58277  2.57844  2.26067  1.34141     29 A - - :
          1.38629  1.38629  1.38629  1.38629
          0.00416  6.17794  6.17794  1.46634  0.26236  1.09861  0.40547
     29   2.04103  1.64155  1.24300  0.94698     30 u - - :
          1.38629  1.38629  1.38629  1.38629
          0.04224  6.17794  3.23682  1.46634  0.26236  1.09861  0.40547
     30   0.90025  2.40010  2.48509  0.86868     31 u - - :
          1.38629  1.38629  1.38629  1.38629
          0.00432  6.14002  6.14002  1.46634  0.26236  0.10040  2.34838
     31   1.14658  1.52988  1.97258  1.11897     32 u - - :
          1.38629  1.38629  1.38629  1.38629
          0.00416  6.17794  6.17794  1.46634  0.26236  1.09861  0.40547
     32   0.99477  1.56394  2.34075  1.12508     33 a - - :
          1.38629  1.38629  1.38629  1.38629
          0.00416  6.17794  6.17794  1.46634  0.26236  1.09861  0.40547
     33   1.30260  0.91111  1.74486  1.88763     34 c - - :
          1.38629  1.38629  1.38629  1.38629
          0.00416  6.17794  6.17794  1.46634  0.26236  1.09861  0.40547
     34   0.81644  1.95418  2.55798  1.08218     35 a - - :
          1.38629  1.38629  1.38629  1.38629
          0.00416  6.17794  6.17794  1.46634  0.26236  1.09861  0.40547
     35   0.88707  2.68494  1.54697  1.18084     36 a - - :
          1.38629  1.38629  1.38629  1.38629
          0.02155  6.17794  3.95035  1.46634  0.26236  1.09861  0.40547
     36   0.88692  1.97884  1.71659  1.30871     37 a - - :
          1.38629  1.38629  1.38629  1.38629
          0.00423  6.16062  6.16062  1.46634  0.26236  0.19522  1.72966
     37   0.78649  1.68131  1.71782  1.72051     38 a - - :
          1.38629  1.38629  1.38629  1.38629
          0.00416  6.17794  6.17794  1.46634  0.26236  1.09861  0.40547
     38   0.59588  2.08432  1.60986  2.08251     39 A - - :
          1.38629  1.38629  1.38629  1.38629
          0.00416  6.17794  6.17794  1.46634  0.26236  1.09861  0.40547
     39   0.76886  1.58017  1.51684  2.19720     40 a - - :
          1.38629  1.38629  1.38629  1.38629
          0.02859  6.17794  3.64554  1.46634  0.26236  1.09861  0.40547
     40   0.91147  2.90974  1.18115  1.44117     41 a - - :
          1.38629  1.38629  1.38629  1.38629
          0.00426  6.15362  6.15362  1.46634  0.26236  0.14750  1.98676
     41   1.19023  1.82584  1.84655  0.97555     42 u - - :
          1.38629  1.38629  1.38629  1.38629
          0.00416  6.17794  6.17794  1.46634  0.26236  1.09861  0.40547
     42   1.35396  2.21010  1.23260  1.07716     43 u - - :
          1.38629  1.38629  1.38629  1.38629
          0.00416  6.17794  6.17794  1.46634  0.26236  1.09861  0.40547
     43   1.25472  1.71330  1.50591  1.16232     44 u - - :
          1.38629  1.38629  1.38629  1.38629
          0.00416  6.17794  6.17794  1.46634  0.26236  1.09861  0.40547
     44   1.37043  1.66018  2.98397  0.68259     45 U - - :
          1.38629  1.38629  1.38629  1.38629
          0.00416  6.17794  6.17794  1.46634  0.26236  1.09861  0.40547
     45   1.15612  1.70216  1.15511  1.67140     46 g - - :
          1.38629  1.38629  1.38629  1.38629
          0.47997  6.17794  0.96989  1.46634  0.26236  1.09861  0.40547
     46   2.25321  3.55314  1.66807  0.38906     47 U - - :
          1.38629  1.38629  1.38629  1.38629
          0.00335  5.70132        *  1.46634  0.26236  0.00000        *
//