|
4
|
1 <!DOCTYPE html>
|
|
|
2 <html lang="en">
|
|
|
3 <head>
|
|
|
4 <meta charset="utf-8">
|
|
|
5 <meta http-equiv="X-UA-Compatible" content="IE=edge" />
|
|
|
6 <title>
|
|
|
7 saml / galaxy_semwebtools — Bitbucket
|
|
|
8 </title>
|
|
|
9 <link rel="icon" type="image/png" href="https://dwz7u9t8u8usb.cloudfront.net/m/2219cd120e6a/img/favicon.png">
|
|
|
10 <meta id="bb-canon-url" name="bb-canon-url" content="https://bitbucket.org">
|
|
|
11
|
|
|
12
|
|
|
13 <link rel="stylesheet" href="https://dwz7u9t8u8usb.cloudfront.net/m/2219cd120e6a/compressed/css/0def6d819f1a.css" type="text/css" />
|
|
|
14
|
|
|
15 <!--[if lt IE 9]><link rel="stylesheet" href="https://dwz7u9t8u8usb.cloudfront.net/m/2219cd120e6a/css/aui/aui-ie.css" media="all"><![endif]-->
|
|
|
16 <!--[if IE 9]><link rel="stylesheet" href="https://dwz7u9t8u8usb.cloudfront.net/m/2219cd120e6a/css/aui/aui-ie9.css" media="all"><![endif]-->
|
|
|
17 <!--[if IE]><link rel="stylesheet" href="https://dwz7u9t8u8usb.cloudfront.net/m/2219cd120e6a/css/aui-overrides-ie.css" media="all"><![endif]-->
|
|
|
18 <meta name="description" content="
|
|
|
19
|
|
|
20 Mirror of https://github.com/samuell/galaxy_semwebtools/
|
|
|
21
|
|
|
22 "/>
|
|
|
23 <link rel="search" type="application/opensearchdescription+xml" href="/opensearch.xml" title="Bitbucket" />
|
|
|
24
|
|
|
25 <link href="/saml/galaxy_semwebtools/rss" rel="alternate nofollow" type="application/rss+xml" title="RSS feed for galaxy_semwebtools" />
|
|
|
26
|
|
|
27 </head>
|
|
|
28 <body class="aui-layout production ">
|
|
|
29 <script type="text/javascript" src="https://dwz7u9t8u8usb.cloudfront.net/m/2219cd120e6a/compressed/js/e98deabf8a2e.js"></script>
|
|
|
30 <div id="page">
|
|
|
31 <div id="wrapper">
|
|
|
32
|
|
|
33 <header id="header" role="banner">
|
|
|
34 <nav class="aui-header aui-dropdown2-trigger-group" role="navigation">
|
|
|
35 <div class="aui-header-inner">
|
|
|
36 <div class="aui-header-primary">
|
|
|
37 <h1 class="aui-header-logo aui-header-logo-bitbucket">
|
|
|
38 <a href="/" class="aui-nav-imagelink">
|
|
|
39 <span class="aui-header-logo-device">Bitbucket</span>
|
|
|
40 </a>
|
|
|
41 </h1>
|
|
|
42 <script id="repo-dropdown-template" type="text/html">
|
|
|
43
|
|
|
44
|
|
|
45 [[#hasViewed]]
|
|
|
46 <div class="aui-dropdown2-section">
|
|
|
47 <strong class="viewed">Recently viewed</strong>
|
|
|
48 <ul class="aui-list-truncate">
|
|
|
49 [[#viewed]]
|
|
|
50 <li class="[[#is_private]]private[[/is_private]][[^is_private]]public[[/is_private]] repository">
|
|
|
51 <a href="[[url]]" title="[[owner]]/[[name]]" class=" aui-icon-container">
|
|
|
52 <img class="repo-avatar size16" src="[[{avatar}]]" alt="[[owner]]/[[name]] avatar"/>
|
|
|
53 [[owner]] / [[name]]
|
|
|
54 </a>
|
|
|
55 </li>
|
|
|
56 [[/viewed]]
|
|
|
57 </ul>
|
|
|
58 </div>
|
|
|
59 [[/hasViewed]]
|
|
|
60 [[#hasUpdated]]
|
|
|
61 <div class="aui-dropdown2-section">
|
|
|
62 <strong class="updated">Recently updated</strong>
|
|
|
63 <ul class="aui-list-truncate">
|
|
|
64 [[#updated]]
|
|
|
65 <li class="[[#is_private]]private[[/is_private]][[^is_private]]public[[/is_private]] repository">
|
|
|
66 <a href="[[url]]" title="[[owner]]/[[name]]" class=" aui-icon-container">
|
|
|
67 <img class="repo-avatar size16" src="[[{avatar}]]" alt="[[owner]]/[[name]] avatar"/>
|
|
|
68 [[owner]] / [[name]]
|
|
|
69 </a>
|
|
|
70 </li>
|
|
|
71 [[/updated]]
|
|
|
72 </ul>
|
|
|
73 </div>
|
|
|
74 [[/hasUpdated]]
|
|
|
75
|
|
|
76 </script>
|
|
|
77 <ul role="menu" class="aui-nav">
|
|
|
78
|
|
|
79 <li>
|
|
|
80 <a href="/plans">
|
|
|
81 Pricing & Signup
|
|
|
82 </a>
|
|
|
83 </li>
|
|
|
84
|
|
|
85 </ul>
|
|
|
86 </div>
|
|
|
87 <div class="aui-header-secondary">
|
|
|
88 <ul role="menu" class="aui-nav">
|
|
|
89 <li>
|
|
|
90 <form action="/repo/all" method="get" class="aui-quicksearch">
|
|
|
91 <label for="search-query" class="assistive">owner/repository</label>
|
|
|
92 <input id="search-query" class="search" type="text" placeholder="owner/repository" name="name">
|
|
|
93 </form>
|
|
|
94 </li>
|
|
|
95 <li>
|
|
|
96 <a class="aui-dropdown2-trigger"aria-controls="header-help-dropdown" aria-owns="header-help-dropdown"
|
|
|
97 aria-haspopup="true" data-container="#header .aui-header-inner" href="#header-help-dropdown">
|
|
|
98 <span class="aui-icon aui-icon-small aui-iconfont-help">Help</span><span class="aui-icon-dropdown"></span>
|
|
|
99 </a>
|
|
|
100 <nav id="header-help-dropdown" class="aui-dropdown2 aui-style-default aui-dropdown2-in-header" aria-hidden="true">
|
|
|
101 <div class="aui-dropdown2-section">
|
|
|
102 <ul>
|
|
|
103 <li><a href="https://confluence.atlassian.com/display/BITBUCKET/bitbucket+Documentation+Home" target="_blank">Documentation</a></li>
|
|
|
104 <li><a href="https://confluence.atlassian.com/display/BITBUCKET/bitbucket+101" target="_blank">Bitbucket 101</a></li>
|
|
|
105 <li><a href="https://confluence.atlassian.com/display/BBKB/Bitbucket+Knowledge+Base+Home" target="_blank">Knowledge Base</a></li>
|
|
|
106 </ul>
|
|
|
107 </div>
|
|
|
108 <div class="aui-dropdown2-section">
|
|
|
109 <ul>
|
|
|
110 <li><a href="https://answers.atlassian.com/tags/bitbucket/" target="_blank">Bitbucket on Atlassian Answers</a></li>
|
|
|
111 <li><a href="/support">Support</a></li>
|
|
|
112 </ul>
|
|
|
113 </div>
|
|
|
114 </nav>
|
|
|
115 </li>
|
|
|
116
|
|
|
117 <li id="user-options">
|
|
|
118 <a href="/account/signin/?next=/saml/galaxy_semwebtools" class="aui-nav-link login-link">Log In</a>
|
|
|
119 </li>
|
|
|
120
|
|
|
121 </ul>
|
|
|
122 </div>
|
|
|
123 </div>
|
|
|
124 </nav>
|
|
|
125 </header>
|
|
|
126 <header id="account-warning" role="banner"
|
|
|
127 class="aui-message-banner warning ">
|
|
|
128 <div class="center-content">
|
|
|
129 <span class="aui-icon aui-icon-warning"></span>
|
|
|
130 <span class="message">
|
|
|
131
|
|
|
132 </span>
|
|
|
133 </div>
|
|
|
134 </header>
|
|
|
135
|
|
|
136 <header id="aui-message-bar">
|
|
|
137
|
|
|
138 </header>
|
|
|
139
|
|
|
140
|
|
|
141 <header id="repo-warning" role="banner" class="aui-message-banner warning">
|
|
|
142 <div class="center-content">
|
|
|
143 <span class="aui-icon aui-icon-warning"></span>
|
|
|
144 <span class="message">
|
|
|
145 </span>
|
|
|
146 </div>
|
|
|
147 </header>
|
|
|
148 <script id="repo-warning-template" type="text/html">
|
|
|
149
|
|
|
150
|
|
|
151
|
|
|
152
|
|
|
153
|
|
|
154 This repository's ownership is pending transfer to <a href="/[[username]]">[[username]]</a>.
|
|
|
155 Visit the <a href="/saml/galaxy_semwebtools/admin/transfer">transfer repository page</a> to view more details.
|
|
|
156
|
|
|
157
|
|
|
158 </script>
|
|
|
159 <header id="repo-header" class="subhead row">
|
|
|
160 <div class="center-content">
|
|
|
161 <div class="repo-summary">
|
|
|
162 <a class="repo-avatar-link" href="/saml/galaxy_semwebtools">
|
|
|
163 <span class="repo-avatar-container size64">
|
|
|
164 <img alt="galaxy_semwebtools" src="https://dwz7u9t8u8usb.cloudfront.net/m/2219cd120e6a/img/language-avatars/python_64.png"/>
|
|
|
165 </span>
|
|
|
166
|
|
|
167
|
|
|
168 </a>
|
|
|
169 <h1><a class="repo-link" href="/saml/galaxy_semwebtools">galaxy_semwebtools</a></h1>
|
|
|
170 <ul class="repo-metadata clearfix">
|
|
|
171 <li>
|
|
|
172 <a class="user" href="/saml">
|
|
|
173 <span class="icon user">User Icon</span>
|
|
|
174 <span>saml</span>
|
|
|
175 </a>
|
|
|
176 </li>
|
|
|
177
|
|
|
178
|
|
|
179 <li class="social">
|
|
|
180 <a class="follow" id="repo-follow"
|
|
|
181 rel="nofollow"
|
|
|
182 href="/saml/galaxy_semwebtools/follow">
|
|
|
183 <span class="icon follow">Follow Icon</span>
|
|
|
184 <span class="text">Follow</span>
|
|
|
185 </a>
|
|
|
186 </li>
|
|
|
187
|
|
|
188 </ul>
|
|
|
189 </div>
|
|
|
190 <div id="repo-toolbar" class="bb-toolbar">
|
|
|
191
|
|
|
192 <div class="aui-buttons">
|
|
|
193 <a id="repo-clone-button" class="aui-button aui-style" href="https://bitbucket.org/saml/galaxy_semwebtools">
|
|
|
194 <span class="icon clone">Clone Icon</span>
|
|
|
195 <span>Clone</span>
|
|
|
196 <span class="aui-icon-dropdown"></span>
|
|
|
197 </a>
|
|
|
198 <a id="fork-button" class="aui-button aui-style"
|
|
|
199 href="/saml/galaxy_semwebtools/fork">
|
|
|
200 <span class="icon fork">Fork Icon</span>
|
|
|
201 <span>Fork</span>
|
|
|
202 </a>
|
|
|
203 </div>
|
|
|
204 <div class="aui-buttons">
|
|
|
205 <a id="compare-button" class="aui-button aui-style"
|
|
|
206 href="/saml/galaxy_semwebtools/compare">
|
|
|
207 <span class="icon compare">Compare Icon</span>
|
|
|
208 <span>Compare</span>
|
|
|
209 </a>
|
|
|
210 <a id="pull-request-button" class="aui-button aui-style"
|
|
|
211 href="/saml/galaxy_semwebtools/pull-request/new">
|
|
|
212 <span class="icon pull-request">Pull Request Icon</span>
|
|
|
213 <span>Pull Request</span>
|
|
|
214 </a>
|
|
|
215 </div>
|
|
|
216
|
|
|
217
|
|
|
218
|
|
|
219 <div id="repo-clone-dialog" class="clone-dialog hidden">
|
|
|
220
|
|
|
221 <div class="clone-url">
|
|
|
222 <div class="aui-buttons">
|
|
|
223 <a href="https://bitbucket.org/saml/galaxy_semwebtools"
|
|
|
224 class="aui-button aui-style aui-dropdown2-trigger" aria-haspopup="true"
|
|
|
225 aria-owns="clone-url-dropdown-header">
|
|
|
226 <span class="dropdown-text">HTTPS</span>
|
|
|
227 </a>
|
|
|
228 <div id="clone-url-dropdown-header" class="aui-dropdown2 aui-style-default">
|
|
|
229 <ul class="aui-list-truncate">
|
|
|
230 <li>
|
|
|
231 <a href="https://bitbucket.org/saml/galaxy_semwebtools"
|
|
|
232
|
|
|
233 data-command="hg clone https://bitbucket.org/saml/galaxy_semwebtools"
|
|
|
234
|
|
|
235 class="item-link https">HTTPS
|
|
|
236 </a>
|
|
|
237 </li>
|
|
|
238 <li>
|
|
|
239 <a href="ssh://hg@bitbucket.org/saml/galaxy_semwebtools"
|
|
|
240
|
|
|
241 data-command="hg clone ssh://hg@bitbucket.org/saml/galaxy_semwebtools"
|
|
|
242
|
|
|
243 class="item-link ssh">SSH
|
|
|
244 </a>
|
|
|
245 </li>
|
|
|
246 </ul>
|
|
|
247 </div>
|
|
|
248 <input type="text" readonly="readonly" value="hg clone https://bitbucket.org/saml/galaxy_semwebtools">
|
|
|
249 </div>
|
|
|
250
|
|
|
251 <p>Need help cloning? Visit
|
|
|
252 <a href="https://confluence.atlassian.com/x/cgozDQ" target="_blank">Bitbucket 101</a>.</p>
|
|
|
253
|
|
|
254 </div>
|
|
|
255
|
|
|
256
|
|
|
257
|
|
|
258
|
|
|
259
|
|
|
260
|
|
|
261 <div class="clone-in-sourcetree"
|
|
|
262 data-https-url="https://bitbucket.org/saml/galaxy_semwebtools"
|
|
|
263 data-ssh-url="ssh://hg@bitbucket.org/saml/galaxy_semwebtools">
|
|
|
264 <p><button class="aui-button aui-style aui-button-primary">Clone in SourceTree</button></p>
|
|
|
265
|
|
|
266 <p><a href="http://www.sourcetreeapp.com" target="_blank">SourceTree</a>
|
|
|
267 is a free Mac client by Atlassian for Git, Mercurial and Subversion.</p>
|
|
|
268 </div>
|
|
|
269
|
|
|
270
|
|
|
271 </div>
|
|
|
272
|
|
|
273 </div>
|
|
|
274 </div>
|
|
|
275 <div class="clearfix"></div>
|
|
|
276 </header>
|
|
|
277 <nav id="repo-tabs" class="aui-navbar aui-navbar-roomy">
|
|
|
278 <div class="aui-navbar-inner">
|
|
|
279 <ul class="aui-nav aui-nav-horizontal">
|
|
|
280
|
|
|
281 <li class="aui-nav-selected">
|
|
|
282 <a href="/saml/galaxy_semwebtools/overview" id="repo-overview-link">Overview</a>
|
|
|
283 </li>
|
|
|
284
|
|
|
285
|
|
|
286 <li>
|
|
|
287 <a href="/saml/galaxy_semwebtools/src" id="repo-source-link">Source</a>
|
|
|
288 </li>
|
|
|
289
|
|
|
290
|
|
|
291 <li>
|
|
|
292 <a href="/saml/galaxy_semwebtools/changesets" id="repo-commits-link">
|
|
|
293 Commits
|
|
|
294 </a>
|
|
|
295 </li>
|
|
|
296
|
|
|
297
|
|
|
298 <li>
|
|
|
299 <a href="/saml/galaxy_semwebtools/pull-requests" id="repo-pullrequests-link">
|
|
|
300 Pull Requests
|
|
|
301
|
|
|
302
|
|
|
303
|
|
|
304 </a>
|
|
|
305 </li>
|
|
|
306
|
|
|
307 <li id="issues-tab" class="
|
|
|
308
|
|
|
309 hidden
|
|
|
310
|
|
|
311 ">
|
|
|
312 <a href="/saml/galaxy_semwebtools/issues?status=new&status=open" id="repo-issues-link">
|
|
|
313 Issues
|
|
|
314
|
|
|
315
|
|
|
316
|
|
|
317 </a>
|
|
|
318 </li>
|
|
|
319 <li id="wiki-tab" class="
|
|
|
320
|
|
|
321 hidden
|
|
|
322
|
|
|
323 ">
|
|
|
324 <a href="/saml/galaxy_semwebtools/wiki" id="repo-wiki-link">Wiki</a>
|
|
|
325 </li>
|
|
|
326
|
|
|
327 <li>
|
|
|
328 <a href="/saml/galaxy_semwebtools/downloads" id="repo-downloads-link">
|
|
|
329 Downloads
|
|
|
330
|
|
|
331
|
|
|
332
|
|
|
333 </a>
|
|
|
334 </li>
|
|
|
335
|
|
|
336
|
|
|
337 </ul>
|
|
|
338 </div>
|
|
|
339 </nav>
|
|
|
340
|
|
|
341 <div id="content" role="main">
|
|
|
342
|
|
|
343 <div id="repo-content">
|
|
|
344
|
|
|
345 <div id="repo-overview">
|
|
|
346
|
|
|
347
|
|
|
348
|
|
|
349 <div class="column">
|
|
|
350
|
|
|
351
|
|
|
352
|
|
|
353 <section id="readme">
|
|
|
354
|
|
|
355 <article class="readme file">
|
|
|
356 <h1 id="semantic-web-tools-for-galaxy">Semantic Web Tools for Galaxy</h1>
|
|
|
357 <h2 id="sparql-import-tool">SPARQL Import tool</h2>
|
|
|
358 <p>This <a href="http://galaxyproject.org/">Galaxy (bioinformatics web portal)</a> toolkit currently just contains a tool that enables to specify an URL to a SPARQL endpoint, and a SPARQL query, and to save the returned data in tabular format, for further processing in Galaxy's tools.</p>
|
|
|
359 <h2 id="installation">Installation</h2>
|
|
|
360 <ol>
|
|
|
361 <li>Create a folder "semweb_tools" under [galaxy_root]/tools/ and add these files.</li>
|
|
|
362 <li>Add the following section right under the starting &lt;toolbox&gt; tag in [galaxy_root]/tool_conf.xml:</li>
|
|
|
363 </ol>
|
|
|
364 <div class="codehilite"><pre> <span class="nt"><section</span> <span class="na">name=</span><span class="s">"Semantic Web Tools"</span> <span class="na">id=</span><span class="s">"semweb_tools"</span><span class="nt">></span>
|
|
|
365 <span class="nt"><tool</span> <span class="na">file=</span><span class="s">"semweb_tools/sparql_import.xml"</span> <span class="nt">/></span>
|
|
|
366 <span class="nt"></section></span>
|
|
|
367 </pre></div>
|
|
|
368
|
|
|
369
|
|
|
370 <h2 id="change-log">Change log</h2>
|
|
|
371 <ul>
|
|
|
372 <li>2012-11-16: Now works properly (at least for my simple test case)!</li>
|
|
|
373 <li>2012-11-16: Created today, still under heavy development!</li>
|
|
|
374 </ul>
|
|
|
375 </article>
|
|
|
376
|
|
|
377 </section>
|
|
|
378
|
|
|
379
|
|
|
380
|
|
|
381 <section id="repo-activity">
|
|
|
382 <h1>
|
|
|
383 Recent Activity
|
|
|
384 <a href="/saml/galaxy_semwebtools/rss" class="rss"><img src="https://dwz7u9t8u8usb.cloudfront.net/m/2219cd120e6a/img/icons/rss.png" alt="RSS feed for galaxy_semwebtools" title="RSS feed for galaxy_semwebtools" /></a>
|
|
|
385 </h1>
|
|
|
386
|
|
|
387
|
|
|
388
|
|
|
389
|
|
|
390
|
|
|
391
|
|
|
392
|
|
|
393
|
|
|
394
|
|
|
395 <div class="newsfeed">
|
|
|
396
|
|
|
397
|
|
|
398
|
|
|
399
|
|
|
400
|
|
|
401
|
|
|
402
|
|
|
403
|
|
|
404 <article class="news-item commit">
|
|
|
405 <span class="icon commit"></span>
|
|
|
406
|
|
|
407
|
|
|
408
|
|
|
409 <a href="/saml"><img alt="Samuel Lampa" src="https://secure.gravatar.com/avatar/87d770f5a0843a130b55572651e9d7d0?d=https%3A%2F%2Fdwz7u9t8u8usb.cloudfront.net%2Fm%2F2219cd120e6a%2Fimg%2Fdefault_avatar%2F32%2Fuser_blue.png&s=32" class="avatar avatar32" /></a>
|
|
|
410
|
|
|
411
|
|
|
412 <p>
|
|
|
413
|
|
|
414
|
|
|
415 <a href="/saml">Samuel Lampa</a>
|
|
|
416
|
|
|
417 committed to
|
|
|
418
|
|
|
419
|
|
|
420 <a href="/saml/galaxy_semwebtools" title="saml/galaxy_semwebtools">saml/galaxy_semwebtools</a>
|
|
|
421
|
|
|
422
|
|
|
423 </p>
|
|
|
424 <time datetime="2012-11-21T17:52:02+00:00">a minute ago</time>
|
|
|
425 <div class="changeset">
|
|
|
426 <a href="/saml/galaxy_semwebtools/changeset/ddc47ed3955c049a79c9407846f856ee" class="changeset-hash">ddc47ed</a>
|
|
|
427 -
|
|
|
428
|
|
|
429 Initial check-in
|
|
|
430
|
|
|
431 </div>
|
|
|
432
|
|
|
433
|
|
|
434
|
|
|
435
|
|
|
436
|
|
|
437
|
|
|
438
|
|
|
439
|
|
|
440
|
|
|
441
|
|
|
442
|
|
|
443
|
|
|
444 </article>
|
|
|
445
|
|
|
446
|
|
|
447
|
|
|
448
|
|
|
449
|
|
|
450
|
|
|
451 <article class="news-item create">
|
|
|
452 <span class="icon create"></span>
|
|
|
453
|
|
|
454
|
|
|
455
|
|
|
456 <a href="/saml"><img alt="Samuel Lampa" src="https://secure.gravatar.com/avatar/87d770f5a0843a130b55572651e9d7d0?d=https%3A%2F%2Fdwz7u9t8u8usb.cloudfront.net%2Fm%2F2219cd120e6a%2Fimg%2Fdefault_avatar%2F32%2Fuser_blue.png&s=32" class="avatar avatar32" /></a>
|
|
|
457
|
|
|
458
|
|
|
459
|
|
|
460 <p>
|
|
|
461
|
|
|
462
|
|
|
463 <a href="/saml">Samuel Lampa</a>
|
|
|
464
|
|
|
465 created
|
|
|
466
|
|
|
467
|
|
|
468 <a href="/saml/galaxy_semwebtools" title="saml/galaxy_semwebtools">saml/galaxy_semwebtools</a>
|
|
|
469
|
|
|
470 </p>
|
|
|
471
|
|
|
472
|
|
|
473 <time datetime="2012-11-21T17:49:18+00:00">4 minutes ago</time>
|
|
|
474
|
|
|
475
|
|
|
476
|
|
|
477
|
|
|
478
|
|
|
479
|
|
|
480 </article>
|
|
|
481
|
|
|
482
|
|
|
483
|
|
|
484
|
|
|
485
|
|
|
486 </div>
|
|
|
487
|
|
|
488
|
|
|
489
|
|
|
490
|
|
|
491
|
|
|
492
|
|
|
493 </section>
|
|
|
494 </div>
|
|
|
495
|
|
|
496 <div class="column">
|
|
|
497
|
|
|
498 <section id="repo-stats">
|
|
|
499
|
|
|
500 <div class="clone-url">
|
|
|
501 <div class="aui-buttons">
|
|
|
502 <a href="https://bitbucket.org/saml/galaxy_semwebtools"
|
|
|
503 class="aui-button aui-style aui-dropdown2-trigger" aria-haspopup="true"
|
|
|
504 aria-owns="clone-url-dropdown-overview">
|
|
|
505 <span class="dropdown-text">HTTPS</span>
|
|
|
506 </a>
|
|
|
507 <div id="clone-url-dropdown-overview" class="aui-dropdown2 aui-style-default">
|
|
|
508 <ul class="aui-list-truncate">
|
|
|
509 <li>
|
|
|
510 <a href="https://bitbucket.org/saml/galaxy_semwebtools"
|
|
|
511
|
|
|
512 data-command="https://bitbucket.org/saml/galaxy_semwebtools"
|
|
|
513
|
|
|
514 class="item-link https">HTTPS
|
|
|
515 </a>
|
|
|
516 </li>
|
|
|
517 <li>
|
|
|
518 <a href="ssh://hg@bitbucket.org/saml/galaxy_semwebtools"
|
|
|
519
|
|
|
520 data-command="ssh://hg@bitbucket.org/saml/galaxy_semwebtools"
|
|
|
521
|
|
|
522 class="item-link ssh">SSH
|
|
|
523 </a>
|
|
|
524 </li>
|
|
|
525 </ul>
|
|
|
526 </div>
|
|
|
527 <input type="text" readonly="readonly" value="https://bitbucket.org/saml/galaxy_semwebtools">
|
|
|
528 </div>
|
|
|
529
|
|
|
530 </div>
|
|
|
531
|
|
|
532
|
|
|
533 <ul class="stats">
|
|
|
534
|
|
|
535 <li class="branches">
|
|
|
536 <a href="#branches" id="branches-dialog-trigger">
|
|
|
537
|
|
|
538 <span class="value">1</span> Branch
|
|
|
539
|
|
|
540 </a>
|
|
|
541 </li>
|
|
|
542 <li class="tags" id="tags-dialog-trigger">
|
|
|
543 <a href="#tags">
|
|
|
544
|
|
|
545 <span class="value">1</span> Tag
|
|
|
546
|
|
|
547 </a>
|
|
|
548 </li>
|
|
|
549 <li class="forks" id="forks-dialog-trigger">
|
|
|
550 <a href="#forks">
|
|
|
551
|
|
|
552 <span class="value">0</span> Forks
|
|
|
553
|
|
|
554 </a>
|
|
|
555 </li>
|
|
|
556
|
|
|
557 <li class="followers">
|
|
|
558 <a href="#followers" id="followers-dialog-trigger">
|
|
|
559
|
|
|
560 <span class="value">1</span> Follower
|
|
|
561
|
|
|
562 </a>
|
|
|
563 </li>
|
|
|
564 </ul>
|
|
|
565
|
|
|
566 <div class="tabbed-filter-widget repo-stats-dialog branches hidden" id="branches-dialog">
|
|
|
567 <div class="tabbed-filter">
|
|
|
568 <input placeholder="Filter Branches" class="filter-box" autosave="branch-dropdown-1706727" type="text">
|
|
|
569 </div>
|
|
|
570
|
|
|
571 <div class="tab-pane active-pane branches" id="branch-list">
|
|
|
572 <ol class="filter-list">
|
|
|
573 <li class="empty-msg">No matching branches</li>
|
|
|
574
|
|
|
575 <li class="comprev filter-item">
|
|
|
576 <a href="/saml/galaxy_semwebtools/src/ddc47ed3955c/?at=default" title="Browse source of default">default</a>
|
|
|
577
|
|
|
578 </li>
|
|
|
579
|
|
|
580 </ol>
|
|
|
581 </div>
|
|
|
582
|
|
|
583 </div>
|
|
|
584
|
|
|
585 <div class="tabbed-filter-widget repo-stats-dialog tags hidden" id="tags-dialog">
|
|
|
586 <div class="tabbed-filter">
|
|
|
587 <input placeholder="Filter Tags" class="filter-box" autosave="tag-dropdown-1706727" type="text">
|
|
|
588 </div>
|
|
|
589 <div class="tab-pane active-pane tags" id="tag-list">
|
|
|
590 <ol class="filter-list">
|
|
|
591 <li class="empty-msg">No matching tags</li>
|
|
|
592
|
|
|
593 <li class="comprev filter-item">
|
|
|
594 <a href="/saml/galaxy_semwebtools/src/ddc47ed3955c?at=tip" title="Browse source of tip">tip</a>
|
|
|
595 <a rel="nofollow" class="compare"
|
|
|
596 href="/saml/galaxy_semwebtools/compare/tip.."
|
|
|
597 title="Show changes between and the main branch.">Compare</a>
|
|
|
598 </li>
|
|
|
599
|
|
|
600 </ol>
|
|
|
601 </div>
|
|
|
602 </div>
|
|
|
603
|
|
|
604 <div class="tabbed-filter-widget repo-stats-dialog forks hidden" id="forks-dialog">
|
|
|
605 <div class="tabbed-filter">
|
|
|
606 <input placeholder="Filter Forks" class="filter-box" autosave="fork-dropdown-1706727" type="text">
|
|
|
607 </div>
|
|
|
608
|
|
|
609 <div class="tab-pane active-pane forks" id="fork-list">
|
|
|
610 <ol class="filter-list empty">
|
|
|
611 <li class="empty-msg">No matching forks</li>
|
|
|
612
|
|
|
613 </ol>
|
|
|
614 </div>
|
|
|
615
|
|
|
616 </div>
|
|
|
617
|
|
|
618 <div class="followers-dialog repo-stats-dialog hidden" id="followers-dialog">
|
|
|
619 <div id="followers-list" class="user-list">
|
|
|
620 <ol>
|
|
|
621 <li class="empty-msg">No followers yet</li>
|
|
|
622
|
|
|
623 <li >
|
|
|
624 <a href="/saml" title="Samuel Lampa">
|
|
|
625 <img alt="saml" src="https://secure.gravatar.com/avatar/87d770f5a0843a130b55572651e9d7d0?d=https%3A%2F%2Fdwz7u9t8u8usb.cloudfront.net%2Fm%2F2219cd120e6a%2Fimg%2Fdefault_avatar%2F32%2Fuser_blue.png&s=32" class="avatar avatar32" />
|
|
|
626 </a>
|
|
|
627 </li>
|
|
|
628
|
|
|
629
|
|
|
630 <li class="current-user hidden">
|
|
|
631 <a href="#nrm" title="Anonymous">
|
|
|
632 <img alt="" src="https://dwz7u9t8u8usb.cloudfront.net/m/2219cd120e6a/img/default_avatar/32/user_blue.png" class="avatar avatar32" />
|
|
|
633 </a>
|
|
|
634 </li>
|
|
|
635
|
|
|
636 </ol>
|
|
|
637 </div>
|
|
|
638 </div>
|
|
|
639
|
|
|
640 <dl class="metadata">
|
|
|
641 <dt>Owner</dt>
|
|
|
642 <dd><a href="/saml">Samuel Lampa</a></dd>
|
|
|
643
|
|
|
644
|
|
|
645
|
|
|
646 <dt>Access Level</dt>
|
|
|
647 <dd>Public</dd>
|
|
|
648
|
|
|
649 <dt>Type</dt>
|
|
|
650 <dd>Mercurial</dd>
|
|
|
651
|
|
|
652
|
|
|
653 <dt>Language</dt>
|
|
|
654 <dd>Python</dd>
|
|
|
655
|
|
|
656
|
|
|
657 <dt>Last Updated</dt>
|
|
|
658 <dd><time datetime="2012-11-21T18:52:02.581101">a minute ago</time></dd>
|
|
|
659
|
|
|
660 <dt>Created</dt>
|
|
|
661 <dd><time datetime="2012-11-21T18:49:18.906678">4 minutes ago</time></dd>
|
|
|
662
|
|
|
663 <dt>Size</dt>
|
|
|
664 <dd>
|
|
|
665 3.9 KB
|
|
|
666 <a rel="nofollow"
|
|
|
667
|
|
|
668 href="/saml/galaxy_semwebtools/get/ddc47ed3955c.zip"
|
|
|
669
|
|
|
670 >(download)</a>
|
|
|
671 </dd>
|
|
|
672
|
|
|
673
|
|
|
674
|
|
|
675 </dl>
|
|
|
676 </section>
|
|
|
677
|
|
|
678
|
|
|
679
|
|
|
680
|
|
|
681
|
|
|
682 </div>
|
|
|
683 <div class="clearfix"></div>
|
|
|
684
|
|
|
685
|
|
|
686
|
|
|
687 </div>
|
|
|
688
|
|
|
689
|
|
|
690
|
|
|
691 </div>
|
|
|
692
|
|
|
693 </div>
|
|
|
694 </div>
|
|
|
695 <footer id="footer" role="contentinfo">
|
|
|
696 <section class="footer-body">
|
|
|
697 <ul>
|
|
|
698 <li><a href="http://blog.bitbucket.org">Blog</a></li>
|
|
|
699 <li><a href="//bitbucket.org/site/master/issues/new">Report a Bug</a></li>
|
|
|
700 <li><a href="/support">Support</a></li>
|
|
|
701 <li><a href="http://confluence.atlassian.com/display/BITBUCKET">Documentation</a></li>
|
|
|
702 <li><a href="http://confluence.atlassian.com/x/IYBGDQ">API</a></li>
|
|
|
703 <li><a href="http://groups.google.com/group/bitbucket-users">Forum</a></li>
|
|
|
704 <li><a href="http://status.bitbucket.org/">Server Status</a></li>
|
|
|
705 <li><a href="http://www.atlassian.com/hosted/terms.jsp">Terms of Service</a></li>
|
|
|
706 <li><a href="http://www.atlassian.com/about/privacy.jsp">Privacy Policy</a></li>
|
|
|
707 </ul>
|
|
|
708 <ul>
|
|
|
709 <li><a href="http://git-scm.com/">Git 1.7.10.3</a></li>
|
|
|
710 <li><a href="http://mercurial.selenic.com/">Mercurial 2.2.2</a></li>
|
|
|
711 <li><a href="https://www.djangoproject.com/">Django 1.3.1</a></li>
|
|
|
712 <li><a href="http://www.python.org/">Python 2.7.3 </a></li>
|
|
|
713 <li><a href="#">b43c5e4a8763 / 2219cd120e6a @ bitbucket23</a></li>
|
|
|
714 </ul>
|
|
|
715 </section>
|
|
|
716 </footer>
|
|
|
717 </div>
|
|
|
718
|
|
|
719 <script type="text/javascript" src="https://dwz7u9t8u8usb.cloudfront.net/m/2219cd120e6a/compressed/js/ed11f3d5ad15.js"></script>
|
|
|
720
|
|
|
721 <!-- This script exists purely for the benefit of our selenium tests -->
|
|
|
722 <script>
|
|
|
723 setTimeout(function () {
|
|
|
724 BB.JsLoaded = true;
|
|
|
725 }, 3000);
|
|
|
726 </script>
|
|
|
727
|
|
|
728
|
|
|
729
|
|
|
730 <script>
|
|
|
731 (function (window) {
|
|
|
732 BB.images = {
|
|
|
733 invitation: 'https://dwz7u9t8u8usb.cloudfront.net/m/2219cd120e6a/img/icons/fugue/card_address.png',
|
|
|
734 noAvatar: 'https://dwz7u9t8u8usb.cloudfront.net/m/2219cd120e6a/img/default_avatar/16/user_blue.png'
|
|
|
735 };
|
|
|
736 BB.user = {"isKbdShortcutsEnabled": true, "isSshEnabled": false, "isAuthenticated": false};
|
|
|
737 BB.repo || (BB.repo = {});
|
|
|
738
|
|
|
739 BB.repo.id = 1706727;
|
|
|
740
|
|
|
741
|
|
|
742 BB.repo.language = 'python';
|
|
|
743 BB.repo.pygmentsLanguage = 'python';
|
|
|
744
|
|
|
745
|
|
|
746 BB.repo.slug = 'galaxy_semwebtools';
|
|
|
747
|
|
|
748
|
|
|
749 BB.repo.owner = {};
|
|
|
750 BB.repo.owner.username = 'saml';
|
|
|
751
|
|
|
752 // Coerce `BB.repo` to a string to get
|
|
|
753 // "davidchambers/mango" or whatever.
|
|
|
754 BB.repo.toString = function () {
|
|
|
755 return BB.cname ? this.slug : '{owner.username}/{slug}'.format(this);
|
|
|
756 }
|
|
|
757
|
|
|
758
|
|
|
759
|
|
|
760 window.setInterval(BB.localize, 60 * 1000);
|
|
|
761 BB.localize();
|
|
|
762
|
|
|
763 })(window);
|
|
|
764 </script>
|
|
|
765
|
|
|
766
|
|
|
767
|
|
|
768 <script>
|
|
|
769 // Bitbucket Google Analytics
|
|
|
770 (function (window) {
|
|
|
771 // Track the main pageview to the Bitbucket GA account.
|
|
|
772 BB.gaqPush(['_trackPageview']);
|
|
|
773 // Track the main pageview to the Atlassian GA account.
|
|
|
774 BB.gaqPush(['atl._trackPageview']);
|
|
|
775
|
|
|
776
|
|
|
777
|
|
|
778
|
|
|
779
|
|
|
780
|
|
|
781 // Include GA commands from sub-templates
|
|
|
782
|
|
|
783
|
|
|
784 (function () {
|
|
|
785 var ga = document.createElement('script');
|
|
|
786 ga.src = ('https:' == document.location.protocol ? 'https://ssl' : 'http://www') + '.google-analytics.com/ga.js';
|
|
|
787 ga.setAttribute('async', 'true');
|
|
|
788 document.documentElement.firstChild.appendChild(ga);
|
|
|
789 }());
|
|
|
790 })(window);
|
|
|
791 </script>
|
|
|
792
|
|
|
793
|
|
|
794
|
|
|
795
|
|
|
796 </body>
|
|
|
797 </html>
|
