annotate env/lib/python3.9/site-packages/networkx/algorithms/components/weakly_connected.py @ 0:4f3585e2f14b draft default tip

"planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"

"""Weakly connected components."""
import networkx as nx
from networkx.utils.decorators import not_implemented_for

__all__ = [
    "number_weakly_connected_components",
    "weakly_connected_components",
    "is_weakly_connected",
]


@not_implemented_for("undirected")
def weakly_connected_components(G):
    """Generate weakly connected components of G.

    Parameters
    ----------
    G : NetworkX graph
        A directed graph

    Returns
    -------
    comp : generator of sets
        A generator of sets of nodes, one for each weakly connected
        component of G.

    Raises
    ------
    NetworkXNotImplemented
        If G is undirected.

    Examples
    --------
    Generate a sorted list of weakly connected components, largest first.

    >>> G = nx.path_graph(4, create_using=nx.DiGraph())
    >>> nx.add_path(G, [10, 11, 12])
    >>> [
    ...     len(c)
    ...     for c in sorted(nx.weakly_connected_components(G), key=len, reverse=True)
    ... ]
    [4, 3]

    If you only want the largest component, it's more efficient to
    use max instead of sort:

    >>> largest_cc = max(nx.weakly_connected_components(G), key=len)

    See Also
    --------
    connected_components
    strongly_connected_components

    Notes
    -----
    For directed graphs only.

    """
    seen = set()
    for v in G:
        if v not in seen:
            c = set(_plain_bfs(G, v))
            yield c
            seen.update(c)


@not_implemented_for("undirected")
def number_weakly_connected_components(G):
    """Returns the number of weakly connected components in G.

    Parameters
    ----------
    G : NetworkX graph
        A directed graph.

    Returns
    -------
    n : integer
        Number of weakly connected components

    Raises
    ------
    NetworkXNotImplemented
        If G is undirected.

    See Also
    --------
    weakly_connected_components
    number_connected_components
    number_strongly_connected_components

    Notes
    -----
    For directed graphs only.

    """
    return sum(1 for wcc in weakly_connected_components(G))


@not_implemented_for("undirected")
def is_weakly_connected(G):
    """Test directed graph for weak connectivity.

    A directed graph is weakly connected if and only if the graph
    is connected when the direction of the edge between nodes is ignored.

    Note that if a graph is strongly connected (i.e. the graph is connected
    even when we account for directionality), it is by definition weakly
    connected as well.

    Parameters
    ----------
    G : NetworkX Graph
        A directed graph.

    Returns
    -------
    connected : bool
        True if the graph is weakly connected, False otherwise.

    Raises
    ------
    NetworkXNotImplemented
        If G is undirected.

    See Also
    --------
    is_strongly_connected
    is_semiconnected
    is_connected
    is_biconnected
    weakly_connected_components

    Notes
    -----
    For directed graphs only.

    """
    if len(G) == 0:
        raise nx.NetworkXPointlessConcept(
            """Connectivity is undefined for the null graph."""
        )

    return len(list(weakly_connected_components(G))[0]) == len(G)


def _plain_bfs(G, source):
    """A fast BFS node generator

    The direction of the edge between nodes is ignored.

    For directed graphs only.

    """
    Gsucc = G.succ
    Gpred = G.pred

    seen = set()
    nextlevel = {source}
    while nextlevel:
        thislevel = nextlevel
        nextlevel = set()
        for v in thislevel:
            if v not in seen:
                yield v
                seen.add(v)
                nextlevel.update(Gsucc[v])
                nextlevel.update(Gpred[v])