diff env/lib/python3.9/site-packages/cwltool/udocker.py @ 0:4f3585e2f14b draft default tip

"planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
author shellac
date Mon, 22 Mar 2021 18:12:50 +0000
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/env/lib/python3.9/site-packages/cwltool/udocker.py	Mon Mar 22 18:12:50 2021 +0000
@@ -0,0 +1,18 @@
+"""Enables Docker software containers via the udocker runtime."""
+
+from typing import List
+
+from .docker import DockerCommandLineJob
+
+
+class UDockerCommandLineJob(DockerCommandLineJob):
+    """Runs a CommandLineJob in a sofware container using the udocker engine."""
+
+    @staticmethod
+    def append_volume(
+        runtime: List[str], source: str, target: str, writable: bool = False
+    ) -> None:
+        """Add binding arguments to the runtime list."""
+        runtime.append(
+            "--volume={}:{}:{}".format(source, target, "rw" if writable else "ro")
+        )