Mercurial > repos > testtool > geo_data
comparison GRsetFromGEO/GRsetFromGEO.R @ 70:759073309c9c draft
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author | testtool |
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date | Fri, 09 Jun 2017 11:48:24 -0400 |
parents | f84cadc1fdd6 |
children |
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69:23e9c26c3334 | 70:759073309c9c |
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1 require("minfi", quietly = TRUE) | |
2 | |
3 options(warn = -1) | |
4 options("download.file.method"="wget") | |
5 | |
6 args <- commandArgs(trailingOnly = TRUE) | |
7 GSE = args[1] | |
8 output = args[2] | |
9 | |
10 GRset <- getGenomicRatioSetFromGEO(GSE) | |
11 | |
12 save(GRset,file = output) |