annotate binary2label.xml @ 2:8f98926130d9 draft default tip

planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/binary2labelimage/ commit a0ba841e8b3aee770a3243155bedfac0adf9a5a6
author thomaswollmann
date Wed, 12 Dec 2018 04:36:44 -0500
parents f772af27a6de
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f772af27a6de planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/\binary2labelimage commit 7c8ef45ea41aa832628cfd1d2931992a2340d7b7
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1 <tool id="binary2labelimage" name="Binary 2 Label" version="0.2">
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2 <description>Converts Binary to Label Image</description>
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3 <requirements>
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4 <requirement type="package" version="0.12.3" >scikit-image</requirement>
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5 </requirements>
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6 <command>
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7 <![CDATA[
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8 python '$__tool_directory__/binary2label.py' '$input' '$output'
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9 ]]>
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10 </command>
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11 <inputs>
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12 <param name="input" type="data" format="tiff,png,jpg,bmp" label="Binary Image File"/>
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13 </inputs>
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14 <outputs>
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15 <data format="tiff" name="output"/>
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16 </outputs>
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17 <tests>
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18 <test>
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19 <param name="input" value="galaxyIcon_noText.tif" />
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20 <output name="output" value="label.tif" ftype="tiff" />
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21 </test>
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22 </tests>
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23 <help>This tool assigns every object an own grey value.</help>
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24 <citations>
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25 <citation type="doi">10.1016/j.jbiotec.2017.07.019</citation>
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26 </citations>
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27 </tool>