Mercurial > repos > tyty > structurefold

changeset 69:bd02fcf26f7a draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded wrapper that correctly handles structure prediction without constraints.
author devteam
date Mon, 24 Nov 2014 18:21:30 -0500
parents fb80870002a3
children f76deb490f06
files predict/predict_RNAs.py
diffstat 1 files changed, 1 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/predict/predict_RNAs.py	Fri Nov 21 16:51:01 2014 -0500
+++ b/predict/predict_RNAs.py	Mon Nov 24 18:21:30 2014 -0500
@@ -55,7 +55,7 @@
         fh.write(seqs[id_s])
         fh.close()
         if not flag:
-            command = shlex.split('Fold %s %s' % (os.path.join(syspath, temp.txt), os.path.join(output_directory, '%s.ct' % id_s)))
+            command = shlex.split('Fold %s %s' % (os.path.join(syspath, 'temp.txt'), os.path.join(output_directory, '%s.ct' % id_s)))
             subprocess.call(command)
         else:
             if id_s in react: