Mercurial > repos > vipints > fml_mergeloci

annotate fml_gff_groomer/t/GFF_2_Source.gff3 @ 0:79726c328621 default tip

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Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
author vipints
date Tue, 07 Jun 2011 17:29:24 -0400
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79726c328621 Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
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1 ##gff-version 3
79726c328621 Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
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2 1 gencode gene 11874 14412 . + . ID=Gene:gene:ENSG00000223972;Name=Gene:gene:ENSG00000223972
79726c328621 Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
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3 1 gencode mRNA 11874 14412 . + . ID=Transcript:gene:ENSG00000223972.1;Parent=Gene:gene:ENSG00000223972;prediction_status=Predicted
79726c328621 Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
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4 1 gencode five_prime_UTR 11874 12227 . + . ID=five_prime_UTR:gene:ENSG00000223972.1;Parent=Transcript:gene:ENSG00000223972.1
79726c328621 Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
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5 1 gencode five_prime_UTR 12613 12721 . + . ID=five_prime_UTR:gene:ENSG00000223972.1;Parent=Transcript:gene:ENSG00000223972.1
79726c328621 Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
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6 1 gencode five_prime_UTR 13221 14158 . + . ID=five_prime_UTR:gene:ENSG00000223972.1;Parent=Transcript:gene:ENSG00000223972.1
79726c328621 Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
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7 1 gencode CDS 14159 14389 . + 0 ID=CDS:gene:ENSG00000223972.1;Name=CDS:gene:ENSG00000223972.1;Parent=Transcript:gene:ENSG00000223972.1
79726c328621 Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
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8 1 gencode three_prime_UTR 14390 14412 . + . ID=three_prime_UTR:gene:ENSG00000223972.1;Parent=Transcript:gene:ENSG00000223972.1
79726c328621 Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
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9 1 gencode exon 11874 12227 . + . ID=exon:gene:ENSG00000223972.1;Parent=Transcript:gene:ENSG00000223972.1
79726c328621 Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
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10 1 gencode exon 12613 12721 . + . ID=exon:gene:ENSG00000223972.1;Parent=Transcript:gene:ENSG00000223972.1
79726c328621 Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
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11 1 gencode exon 13221 14412 . + . ID=exon:gene:ENSG00000223972.1;Parent=Transcript:gene:ENSG00000223972.1
79726c328621 Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
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12 1 gencode mRNA 12010 13670 . + . ID=Transcript:gene:ENSG00000223972.2;Parent=Gene:gene:ENSG00000223972;prediction_status=Predicted
79726c328621 Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
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13 1 gencode exon 12010 12057 . + . ID=exon:gene:ENSG00000223972.2;Parent=Transcript:gene:ENSG00000223972.2
79726c328621 Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
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14 1 gencode exon 12179 12227 . + . ID=exon:gene:ENSG00000223972.2;Parent=Transcript:gene:ENSG00000223972.2
79726c328621 Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
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15 1 gencode exon 12613 12697 . + . ID=exon:gene:ENSG00000223972.2;Parent=Transcript:gene:ENSG00000223972.2
79726c328621 Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
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16 1 gencode exon 12975 13052 . + . ID=exon:gene:ENSG00000223972.2;Parent=Transcript:gene:ENSG00000223972.2
79726c328621 Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
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17 1 gencode exon 13221 13374 . + . ID=exon:gene:ENSG00000223972.2;Parent=Transcript:gene:ENSG00000223972.2
79726c328621 Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
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18 1 gencode exon 13453 13670 . + . ID=exon:gene:ENSG00000223972.2;Parent=Transcript:gene:ENSG00000223972.2
79726c328621 Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
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19 scaffold_1 JGI_Filtered gene 47 2523 . - . ID=scaffold_100001.1;Name=scaffold_100001.1
79726c328621 Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
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20 scaffold_1 JGI_Filtered mRNA 47 2523 . - . ID=Transcript:918720;Name=Transcript:918720;Parent=scaffold_100001.1
79726c328621 Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
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21 scaffold_1 JGI_Filtered three_prime_UTR 47 66 . - . ID=three_prime_UTR:918720;Parent=Transcript:918720
79726c328621 Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
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22 scaffold_1 JGI_Filtered exon 47 252 . - . ID=exon:918720;Parent=Transcript:918720
79726c328621 Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
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23 scaffold_1 JGI_Filtered CDS 67 252 . - 0 ID=CDS:918720;Parent=Transcript:918720;Name=scaffold_100001.1
79726c328621 Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
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24 scaffold_1 JGI_Filtered exon 407 782 . - . ID=exon:918720;Parent=Transcript:918720
79726c328621 Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
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25 scaffold_1 JGI_Filtered CDS 407 782 . - 0 ID=CDS:918720;Parent=Transcript:918720;Name=scaffold_100001.1
79726c328621 Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
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26 scaffold_1 JGI_Filtered exon 1423 1642 . - . ID=exon:918720;Parent=Transcript:918720
79726c328621 Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
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27 scaffold_1 JGI_Filtered CDS 1423 1642 . - 1 ID=CDS:918720;Parent=Transcript:918720;Name=scaffold_100001.1
79726c328621 Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
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28 scaffold_1 JGI_Filtered exon 1803 2035 . - . ID=exon:918720;Parent=Transcript:918720
79726c328621 Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
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29 scaffold_1 JGI_Filtered CDS 1803 2035 . - 2 ID=CDS:918720;Parent=Transcript:918720;Name=scaffold_100001.1
79726c328621 Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
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30 scaffold_1 JGI_Filtered exon 2124 2347 . - . ID=exon:918720;Parent=Transcript:918720
79726c328621 Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
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31 scaffold_1 JGI_Filtered CDS 2124 2347 . - 1 ID=CDS:918720;Parent=Transcript:918720;Name=scaffold_100001.1
79726c328621 Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
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32 scaffold_1 JGI_Filtered exon 2444 2523 . - . ID=exon:918720;Parent=Transcript:918720
79726c328621 Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
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33 scaffold_1 JGI_Filtered CDS 2444 2503 . - 0 ID=CDS:918720;Parent=Transcript:918720;Name=scaffold_100001.1
79726c328621 Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
vipints
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34 scaffold_1 JGI_Filtered five_prime_UTR 2504 2523 . - . ID=five_prime_UTR:918720;Parent=Transcript:918720