Mercurial > repos > yating-l > multi_fasta_glimmer_hmm
comparison tool_dependencies.xml @ 0:b07a805758cc draft
planemo upload for repository https://github.com/remimarenco/multi_fasta_glimmerhmm.git commit 1245031a7d52c922c86f33ebfd0f20eb9ddf84ac-dirty
author | yating-l |
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date | Mon, 01 May 2017 15:29:33 -0400 |
parents | |
children | 6618d16f276c |
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-1:000000000000 | 0:b07a805758cc |
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1 <?xml version="1.0"?> | |
2 <tool_dependency> | |
3 <package name="glimmerhmm" version="3.0.4"> | |
4 <install version="1.0"> | |
5 <actions_group> | |
6 <actions architecture="x86_64" os="linux"> | |
7 <action type="download_by_url">ftp://ccb.jhu.edu/pub/software/glimmerhmm/GlimmerHMM-3.0.4.tar.gz</action> | |
8 <action type="move_directory_files"> | |
9 <source_directory>.</source_directory> | |
10 <destination_directory>$INSTALL_DIR</destination_directory> | |
11 </action> | |
12 <action type="set_environment"> | |
13 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable> | |
14 </action> | |
15 <action type="shell_command"> | |
16 mv $INSTALL_DIR/bin/glimmerhmm_linux_x86_64 $INSTALL_DIR/bin/glimmerhmm | |
17 </action> | |
18 </actions> | |
19 </actions_group> | |
20 </install> | |
21 <readme>GlimmerHMM is a new gene finder based on a Generalized Hidden Markov Model (GHMM). https://ccb.jhu.edu/software/glimmerhmm/</readme> | |
22 </package> | |
23 | |
24 </tool_dependency> | |
25 |