Mercurial > repos > yating-l > multi_fasta_glimmer_hmm

changeset 1:6618d16f276c draft

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planemo upload for repository https://github.com/remimarenco/multi_fasta_glimmerhmm.git commit 5594d470c65c83b5b620681db44b1975bd218581-dirty
author yating-l
date Mon, 01 May 2017 17:44:12 -0400
parents b07a805758cc
children ae0b24f726c3
files tool_dependencies.xml
diffstat 1 files changed, 5 insertions(+), 4 deletions(-) [+]
line wrap: on
line diff
--- a/tool_dependencies.xml	Mon May 01 15:29:33 2017 -0400
+++ b/tool_dependencies.xml	Mon May 01 17:44:12 2017 -0400
@@ -8,13 +8,14 @@
                     <action type="move_directory_files">
                         <source_directory>.</source_directory>                       
                         <destination_directory>$INSTALL_DIR</destination_directory>
-                    </action>  
+                    </action> 
+                    <action type="move_file" rename_to="glimmerhmm">
+                        <source>$INSTALL_DIR/bin/glimmerhmm_linux_x86_64</source>
+                        <destination>$INSTALL_DIR/bin</destination>
+                    </action> 
                     <action type="set_environment">
                         <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
                     </action>  
-                    <action type="shell_command">
-                        mv $INSTALL_DIR/bin/glimmerhmm_linux_x86_64 $INSTALL_DIR/bin/glimmerhmm
-                    </action>
                 </actions>
             </actions_group>
          </install>