Mercurial > repos > yating-l > trfbig
comparison tool_dependencies.xml @ 0:ba819b65bef3 draft default tip
planemo upload for repository https://github.com/goeckslab/trfBig commit 97fd3895fbafc69df1a1c4092f261ba23fc0bd0b-dirty
| author | yating-l |
|---|---|
| date | Mon, 01 May 2017 17:34:42 -0400 |
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| children |
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| -1:000000000000 | 0:ba819b65bef3 |
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| 1 <?xml version="1.0"?> | |
| 2 <tool_dependency> | |
| 3 <!-- Package trfBig --> | |
| 4 <package name="trfBig" version="1.0"> | |
| 5 <install version="1.0"> | |
| 6 <actions> | |
| 7 <action type="download_binary" target_directory="bin"> | |
| 8 <url_template os="darwin">http://hgdownload.cse.ucsc.edu/admin/exe/macOSX.${architecture}/trfBig</url_template> | |
| 9 <url_template os="linux">http://hgdownload.cse.ucsc.edu/admin/exe/linux.${architecture}/trfBig</url_template> | |
| 10 </action> | |
| 11 <action type="chmod"> | |
| 12 <file mode="750">$INSTALL_DIR/bin/trfBig</file> | |
| 13 </action> | |
| 14 <action type="set_environment"> | |
| 15 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable> | |
| 16 </action> | |
| 17 </actions> | |
| 18 </install> | |
| 19 <readme>The tools downloaded by this dependency definition are free for academic use.</readme> | |
| 20 </package> | |
| 21 | |
| 22 <!-- Package trf --> | |
| 23 <!-- https://tandem.bu.edu/trf/downloads/trf407b.linux64 --> | |
| 24 <package name="trf" version="4.07b"> | |
| 25 <install version="1.0"> | |
| 26 <actions_group> | |
| 27 <actions architecture="x86_64" os="linux"> | |
| 28 <action type="download_by_url" target_directory="bin"> | |
| 29 https://tandem.bu.edu/trf/downloads/trf407b.linux64 | |
| 30 </action> | |
| 31 <action type="move_file" rename_to="trf"> | |
| 32 <source>trf407b.linux64</source> | |
| 33 <destination>$INSTALL_DIR/bin</destination> | |
| 34 </action> | |
| 35 <action type="chmod"> | |
| 36 <file mode="750">$INSTALL_DIR/bin/trf</file> | |
| 37 </action> | |
| 38 <action type="set_environment"> | |
| 39 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable> | |
| 40 </action> | |
| 41 </actions> | |
| 42 <actions architecture="x86_64" os="darwin"> | |
| 43 <action type="download_by_url" target_directory="bin"> | |
| 44 https://tandem.bu.edu/trf/downloads/trf407b.macos64 | |
| 45 </action> | |
| 46 <action type="move_file" rename_to="trf" os="darwin"> | |
| 47 <source>trf407b.macos64</source> | |
| 48 <destination>$INSTALL_DIR/bin</destination> | |
| 49 </action> | |
| 50 <action type="chmod"> | |
| 51 <file mode="750">$INSTALL_DIR/bin/trf</file> | |
| 52 </action> | |
| 53 <action type="set_environment"> | |
| 54 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable> | |
| 55 </action> | |
| 56 </actions> | |
| 57 </actions_group> | |
| 58 </install> | |
| 59 <readme>The tools downloaded by this dependency definition are free for academic use.</readme> | |
| 60 </package> | |
| 61 </tool_dependency> |