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annotate commons/pyRepetUnit/hmmer/hmmOutput/tests/datas/hmmscanOutputTab.txt @ 18:94ab73e8a190

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author m-zytnicki
date Mon, 29 Apr 2013 03:20:15 -0400
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1 # --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord
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2 # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target
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3 #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- ---------------------
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4 rve PF00665.18 169 Polinton-1_DY:classII:Polinton_4 - 4927 5.4e-30 103.7 1.8 1 2 0.7 2.4e+03 -3.3 0.0 50 78 2742 2766 2739 2766 0.80 Integrase core domain
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5 rve PF00665.18 169 Polinton-1_DY:classII:Polinton_4 - 4927 5.4e-30 103.7 1.8 2 2 1.9e-33 6.7e-30 103.4 0.7 4 168 2951 3101 2947 3102 0.92 Integrase core domain
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6 Chromo PF00385.16 69 Polinton-1_DY:classII:Polinton_4 - 4927 3.3e-06 26.0 0.0 1 1 2.5e-09 8.5e-06 24.7 0.0 4 51 3198 3228 3195 3239 0.75 'chromo' (CHRromatin Organisation MOdifier) domain
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7 GARS_A PF01071.11 208 Polinton-1_DY:classII:Polinton_4 - 4927 7.6 3.0 0.7 1 1 0.0031 11 2.5 0.5 196 204 2117 2125 2117 2125 0.95 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain