Repository 'neat_genreads'
hg clone https://toolshed.g2.bx.psu.edu/repos/thondeboer/neat_genreads

Changeset 6:5bcfac4f8116 (2018-05-15)
Previous changeset 5:98195057e06d (2018-05-15) Next changeset 7:fc1c7b6fb7b6 (2018-05-15)
Commit message:
planemo upload commit e96b43f96afce6a7b7dfd4499933aad7d05c955e-dirty
modified:
computeFraglen.xml
genMutModel.xml
genSeqErrorModel.xml
neat_genreads.xml
b
diff -r 98195057e06d -r 5bcfac4f8116 computeFraglen.xml
--- a/computeFraglen.xml Tue May 15 17:08:20 2018 -0400
+++ b/computeFraglen.xml Tue May 15 17:12:43 2018 -0400
[
@@ -6,7 +6,6 @@
   <requirements>
     <requirement type="package" version="0.1.19">samtools</requirement>
     <requirement type="package">numpy</requirement>
-    <requirement type="package">scipy</requirement>
   </requirements>
   <command detect_errors="exit_code">
     <![CDATA[
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diff -r 98195057e06d -r 5bcfac4f8116 genMutModel.xml
--- a/genMutModel.xml Tue May 15 17:08:20 2018 -0400
+++ b/genMutModel.xml Tue May 15 17:12:43 2018 -0400
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@@ -5,7 +5,6 @@
   <description>generates a mutation model based on provided mutations. Creates model file for use in NEAT-genReads</description>
   <requirements>
     <requirement type="package">numpy</requirement>
-    <requirement type="package">scipy</requirement>
     <requirement type="package">matplotlib</requirement>
   </requirements>
   <command detect_errors="exit_code">
b
diff -r 98195057e06d -r 5bcfac4f8116 genSeqErrorModel.xml
--- a/genSeqErrorModel.xml Tue May 15 17:08:20 2018 -0400
+++ b/genSeqErrorModel.xml Tue May 15 17:12:43 2018 -0400
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@@ -5,7 +5,6 @@
   <description>generates sequence error model for genReads. Creates model file for use in NEAT-genReads</description>
   <requirements>
     <requirement type="package">numpy</requirement>
-    <requirement type="package">scipy</requirement>
     <requirement type="package">matplotlib</requirement>
   </requirements>
   <command detect_errors="exit_code">
b
diff -r 98195057e06d -r 5bcfac4f8116 neat_genreads.xml
--- a/neat_genreads.xml Tue May 15 17:08:20 2018 -0400
+++ b/neat_genreads.xml Tue May 15 17:12:43 2018 -0400
[
@@ -5,7 +5,6 @@
   <description>is a fine-grained read simulator</description>
   <requirements>
     <requirement type="package">numpy</requirement>
-    <requirement type="package">scipy</requirement>
   </requirements>
   <command detect_errors="exit_code">
     <![CDATA[