| Previous changeset 6:5bcfac4f8116 (2018-05-15) Next changeset 8:dc383ecbf839 (2018-05-15) |
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Commit message:
planemo upload commit e96b43f96afce6a7b7dfd4499933aad7d05c955e-dirty |
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modified:
computeGC.xml genMutModel.xml |
| b |
| diff -r 5bcfac4f8116 -r fc1c7b6fb7b6 computeGC.xml --- a/computeGC.xml Tue May 15 17:12:43 2018 -0400 +++ b/computeGC.xml Tue May 15 18:12:29 2018 -0400 |
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| @@ -18,7 +18,7 @@ > out.genomecov && python2 $__tool_directory__/utilities/computeGC.py #if $in_type.input_type == "built-in": - -r ${in_type.reference.path} + -r ${in_type.reference.fields.path} #else: -r ${in_type.reference} #end if |
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| diff -r 5bcfac4f8116 -r fc1c7b6fb7b6 genMutModel.xml --- a/genMutModel.xml Tue May 15 17:12:43 2018 -0400 +++ b/genMutModel.xml Tue May 15 18:12:29 2018 -0400 |
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| @@ -12,7 +12,7 @@ ## Filenames and extensions are important, so make some links to make life easier downstream ln -s $mutation_file mutation_file.vcf #if $in_type.input_type == "built-in": - && ln ${in_type.reference.fields.path} reference.fa + && ln -s ${in_type.reference.fields.path} reference.fa #else: && ln ${in_type.reference} reference.fa #end if |