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Repository droplet_barcode_plot
Name: droplet_barcode_plot
Owner: ebi-gxa
Synopsis: Make a cell barcode plot for droplet single-cell RNA-seq QC
Given a barcode freqeuncy table or an MTX-format matrix from which one can be calculated, produces a barcode rank plot to assess distinctness of droplets with cells over those without.
Content homepage: https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary
Development repository: https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/tree/develop/tools/droplet-rank-plot/.shed.yml
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/ebi-gxa/droplet_barcode_plot/0e985680e67d
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/ebi-gxa/droplet_barcode_plot
Type: unrestricted
Revision: 1:0e985680e67d
This revision can be installed: True
Times cloned / installed: 384

Contents of this repository

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Name Description Version Minimum Galaxy Version
Creates a barcode rank plot for quality control of droplet single-cell RNA-seq data 1.6.1+galaxy1 18.01

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis