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Repository stacks_assembleperead

Name: stacks_assembleperead

Owner: iuc

Synopsis: Stacks: assemble read pairs by locus (from the Stacks tool suite)

Detailed description:

Stacks is a software pipeline for building loci from short-read sequences, such as those generated on the Illumina platform.
Stacks was developed to work with restriction enzyme-based data, such as RAD-seq, for the purpose of building genetic maps and conducting population genomics and phylogeography.

http://catchenlab.life.illinois.edu/stacks/

Content homepage: http://catchenlab.life.illinois.edu/stacks/

Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/stacks

Link to this repository: https://toolshed.g2.bx.psu.edu/view/iuc/stacks_assembleperead/38ecfb8d52c6

Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/stacks_assembleperead

Type: unrestricted

Revision: 13:38ecfb8d52c6

This revision can be installed: True

Times cloned / installed: 776

Contents of this repository

Name	Description	Version	Minimum Galaxy Version
Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Stacks: assemble read pairs by locus View tool metadata	run the STACKS sort_read_pairs.pl and exec_velvet.pl wrappers	1.46.1	16.01