Repository cdhit
Name: cdhit
Owner: bebatut
Synopsis: Cd-Hit is a very widely used program for clustering and comparing protein or nucleotide sequences
Content homepage: https://github.com/weizhongli/cdhit
Development repository: https://github.com/ASaiM/galaxytools/tree/master/tools/cdhit/
Link to this repository: https://toolshed.g2.bx.psu.edu/view/bebatut/cdhit/93f25d52cfa5
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/bebatut/cdhit
Type: unrestricted
Revision: 1:93f25d52cfa5
This revision can be installed: True
Times cloned / installed: 1088
Dependencies of this repository

Tool dependencies - repository tools require handling of these dependencies
Name Version Type
cd-hit 4.6.4 package

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
Cluster a protein dataset into representative sequences 1.3 16.01
Cluster a nucleotide dataset into representative sequences 1.3 16.01

Categories
Fasta Manipulation - Tools for manipulating fasta data
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis