Repository gem_escher_visualization
Name: gem_escher_visualization
Owner: iuc
Synopsis: Wrapper for the gem_tools tool suite: Pathway visualization
This repository contains a collection of Galaxy tools for performing various analyses on genome-scale
metabolic models (GEMs). The tools leverage COBRApy and other Python libraries to provide functionalities
such as phenotype phase plane analysis, gene knockout analysis, flux variability analysis, and more.
Content homepage: https://github.com/AlmaasLab/elixir-galaxy-tools-systemsbiology
Development repository: https://github.com/AlmaasLab/elixir-galaxy-tools-systemsbiology
Link to this repository: https://toolshed.g2.bx.psu.edu/view/iuc/gem_escher_visualization/b79cf44068bc
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/gem_escher_visualization
Type: unrestricted
Revision: 0:b79cf44068bc
This revision can be installed: True
Times cloned / installed: 54

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
of a GEM using Escher 0.29.1 23.0

Categories
Metabolomics - Tools for use in the study of Metabolomics
Systems Biology - Systems biology tools
Synthetic Biology - Tools for synthetic biology