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Repository nlstradamus
Name: nlstradamus
Owner: peterjc
Synopsis: Find nuclear localization signals (NLSs) in protein sequences
Wraps the NLStradamus tool for prediction of nuclear localization signals (NLSs),
which uses a Hidden Markov Model (HMM).

Takes a FASTA file of proteins as input, returns a tabular file as output.

Requires the C++ version of NLStradamus, included with NLStradamus 1.7 (or later).

http://www.moseslab.csb.utoronto.ca/NLStradamus
Type: unrestricted
Revision: 5:e8f15b0136cd
This revision can be installed: True
Times cloned / installed: 1586
Dependencies of this repository

Name Version Type
NLStradamus 1.8 package

Contents of this repository

Name Description Version Minimum Galaxy Version
Find nuclear localization signals (NLSs) in protein sequences 0.0.10 any

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis
Fasta Manipulation - Tools for manipulating fasta data