|LoFreq is a fast and sensitive variant-caller for inferring SNVs and indels
from next-generation sequencing data. It makes full use of base-call qualities
and other sources of errors inherent in sequencing (e.g. mapping or base/indel
alignment uncertainty), which are usually ignored by other methods or only
used for filtering.
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/lofreq_call
|Minimum Galaxy Version