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Repository lofreq_call
Name: lofreq_call
Owner: iuc
Synopsis: Call variants with LoFreq in Galaxy.
LoFreq is a fast and sensitive variant-caller for inferring SNVs and indels
from next-generation sequencing data. It makes full use of base-call qualities
and other sources of errors inherent in sequencing (e.g. mapping or base/indel
alignment uncertainty), which are usually ignored by other methods or only
used for filtering.
Content homepage:
Type: unrestricted
Revision: 2:dfadc322b065
This revision can be installed: True
Times cloned / installed: 3635

Contents of this repository

Name Description Version Minimum Galaxy Version
with LoFreq 16.01

Variant Analysis - Tools for single nucleotide polymorphism data such as WGA