| $GALAXY_WEBAPOLLO_URL |
The URL at which Apollo is accessible, internal to Galaxy
and where the tools run. Must be absolute, with FQDN and
protocol. |
| $GALAXY_WEBAPOLLO_USER |
The admin user which Galaxy should use to talk to Apollo. |
| $GALAXY_WEBAPOLLO_PASSWORD |
The password for the admin user. |
| $ARROW_GLOBAL_CONFIG_PATH |
Path to a python-apollo/arrow conf file. Use in place of
$GALAXY_WEBAPOLLO_URL, $GALAXY_WEBAPOLLO_USER
and $GALAXY_WEBAPOLLO_PASSWORD. |
| $GALAXY_WEBAPOLLO_EXT_URL |
May be relative or absolute.
The external URL at which Apollo is accessible to end
users. |
| $GALAXY_SHARED_DIR |
Directory shared between Galaxy and Apollo, used to
exchange JBrowse instances. If not set, JBrowse data will
be zipped and sent to the remote server. |
| $GALAXY_APOLLO_ORG_SUFFIX |
Set to 'id' if you want organism names to be suffixed
with user id to avoid name collisions. Set to 'email' to
use user email as suffix. Leave empty for no suffix. |