| This tool is to rename or truncate scaffold names in target genome so that the sequence names are less than 31 characters. Rename all scaffolds to scaffold_1, scaffold_2, ..., scaffold_N and provide a name mapping file. Or truncate the scaffold names that are more than 31 characters and replace each invalid character (non-ASCII, '\\t', '\\n', '\\x0b', '\\x0c', '\\r') with '_' and also output a name mapping file. |
hg clone https://toolshed.g2.bx.psu.edu/repos/yating-l/rename_scaffolds
| Name | Description | Version | Minimum Galaxy Version |
|---|---|---|---|
| a Galaxy tool to rename or truncate the scaffold names in the target genome so that they won't exceed 31 characters | 2.3 | 16.01 | |