annotate test-data/cHi-C/chicQualityControl/new_referencepoints.bed_raw_filter @ 17:03dd3c16ae4e draft default tip

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 2a0943e78bdc8ebb13f181399206a9eea37ed78f"
author iuc
date Tue, 16 Mar 2021 15:09:57 +0000
parents d5e27e6cfa59
children
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03dd3c16ae4e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 2a0943e78bdc8ebb13f181399206a9eea37ed78f"
iuc
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1 # Created with chicQualityControl version 3.6
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d5e27e6cfa59 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3d3fe0c7636592f01981d491dc8ff44bb55c1750"
iuc
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2 # A sparsity of -1.0 indicates a faulty reference point e.g. no data for this reference point was in the matrix.
d5e27e6cfa59 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3d3fe0c7636592f01981d491dc8ff44bb55c1750"
iuc
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3 # Used Matrices 0_matrix.cool 1_matrix.cool
d5e27e6cfa59 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3d3fe0c7636592f01981d491dc8ff44bb55c1750"
iuc
parents: 11
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4 # Chromosome Start End Sparsity 0_matrix.cool Sparsity 1_matrix.cool
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49c8055f6830 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3b41d687ff30583540d055f6995de00530cca81d-dirty"
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5 chr1 4487435 4487435 Sox17 0.14485514485514486 0.16083916083916083
49c8055f6830 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3b41d687ff30583540d055f6995de00530cca81d-dirty"
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6 chr1 14300280 14300280 Eya1 0.14285714285714285 0.1938061938061938
49c8055f6830 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3b41d687ff30583540d055f6995de00530cca81d-dirty"
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7 chr1 19093103 19093103 Tfap2d 0.1048951048951049 0.16683316683316685
49c8055f6830 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3b41d687ff30583540d055f6995de00530cca81d-dirty"
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8 chr1 19198995 19198995 Tfap2b 0.01898101898101898 0.016983016983016984
49c8055f6830 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3b41d687ff30583540d055f6995de00530cca81d-dirty"
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9 chr1 24202042 24202042 Col9a1 0.10589410589410589 0.12787212787212787
49c8055f6830 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3b41d687ff30583540d055f6995de00530cca81d-dirty"
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10 chr1 33776741 33776741 Rab23 0.15484515484515485 0.2137862137862138
49c8055f6830 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3b41d687ff30583540d055f6995de00530cca81d-dirty"
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11 chr1 38684089 38684089 Aff3 0.11588411588411589 0.11388611388611389
49c8055f6830 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3b41d687ff30583540d055f6995de00530cca81d-dirty"
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12 chr1 42753991 42753991 Pou3f3 0.04995004995004995 0.07592407592407592
49c8055f6830 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3b41d687ff30583540d055f6995de00530cca81d-dirty"
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13 chr1 52176282 52176282 Stat1 0.19080919080919082 0.22777222777222778
49c8055f6830 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3b41d687ff30583540d055f6995de00530cca81d-dirty"
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14 chr1 52557292 52557292 Nab1 0.02197802197802198 0.024975024975024976
49c8055f6830 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3b41d687ff30583540d055f6995de00530cca81d-dirty"
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15 chr1 53118507 53118507 Mstn 0.3116883116883117 0.37462537462537465
49c8055f6830 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3b41d687ff30583540d055f6995de00530cca81d-dirty"
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16 chr1 57028178 57028178 Satb2 0.12287712287712288 0.14385614385614387
49c8055f6830 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3b41d687ff30583540d055f6995de00530cca81d-dirty"
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17 chr1 59821123 59821123 Bmpr2 0.14085914085914086 0.16983016983016982
49c8055f6830 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3b41d687ff30583540d055f6995de00530cca81d-dirty"
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18 chr1 66991630 66991630 Myl1 0.0919080919080919 0.09290709290709291
49c8055f6830 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3b41d687ff30583540d055f6995de00530cca81d-dirty"
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19 chr1 74648029 74648029 Stk36 0.2777222777222777 0.3356643356643357
49c8055f6830 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3b41d687ff30583540d055f6995de00530cca81d-dirty"
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20 chr1 74818466 74818466 Wnt6 0.29270729270729273 0.34165834165834164
49c8055f6830 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3b41d687ff30583540d055f6995de00530cca81d-dirty"
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21 chr1 74838593 74838593 Wnt10a 0.00999000999000999 0.008991008991008992
49c8055f6830 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3b41d687ff30583540d055f6995de00530cca81d-dirty"
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22 chr1 74998246 74998246 Ihh 0.008991008991008992 0.003996003996003996
49c8055f6830 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3b41d687ff30583540d055f6995de00530cca81d-dirty"
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23 chr1 75356867 75356867 Des 0.18081918081918083 0.21678321678321677
49c8055f6830 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3b41d687ff30583540d055f6995de00530cca81d-dirty"
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24 chr1 77511663 77511663 Epha4 0.15684315684315683 0.22277722277722278
49c8055f6830 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3b41d687ff30583540d055f6995de00530cca81d-dirty"
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25 chr1 78193711 78193711 Pax3 0.24375624375624375 0.3096903096903097
49c8055f6830 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3b41d687ff30583540d055f6995de00530cca81d-dirty"
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26 chr1 89102386 89102386 Chrng 0.16783216783216784 0.2217782217782218
49c8055f6830 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3b41d687ff30583540d055f6995de00530cca81d-dirty"
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27 chr1 93355905 93355905 Per2 0.15384615384615385 0.16483516483516483
49c8055f6830 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3b41d687ff30583540d055f6995de00530cca81d-dirty"
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28 chr1 93698054 93698054 Twist2 0.22277722277722278 0.23476523476523475
49c8055f6830 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3b41d687ff30583540d055f6995de00530cca81d-dirty"
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29 chr1 94076918 94076918 Hdac4 0.0 0.0
49c8055f6830 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3b41d687ff30583540d055f6995de00530cca81d-dirty"
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30 chr1 107677300 107677300 Tnfrsf11a 0.14685314685314685 0.16383616383616384
49c8055f6830 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3b41d687ff30583540d055f6995de00530cca81d-dirty"
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31 chr1 120950196 120950196 Gli2 0.13986013986013987 0.2007992007992008
49c8055f6830 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3b41d687ff30583540d055f6995de00530cca81d-dirty"
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32 chr1 122499064 122499064 En1 0.1008991008991009 0.11988011988011989
49c8055f6830 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3b41d687ff30583540d055f6995de00530cca81d-dirty"
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33 chr1 127808791 127808791 Lypd1 0.18681318681318682 0.22977022977022976
49c8055f6830 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3b41d687ff30583540d055f6995de00530cca81d-dirty"
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34 chr1 135934092 135934092 Fmod 0.3516483516483517 0.4145854145854146
49c8055f6830 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3b41d687ff30583540d055f6995de00530cca81d-dirty"
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35 chr1 136186581 136186581 MyoG 0.07392607392607392 0.09090909090909091
49c8055f6830 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3b41d687ff30583540d055f6995de00530cca81d-dirty"
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36 chr1 152313295 152313295 Prg4 0.00999000999000999 0.006993006993006993
49c8055f6830 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3b41d687ff30583540d055f6995de00530cca81d-dirty"
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37 chr1 164004278 164006270 mm712 0.26173826173826176 0.2867132867132867
49c8055f6830 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3b41d687ff30583540d055f6995de00530cca81d-dirty"
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38 chr1 164147754 164147754 Dnm3os 0.24875124875124874 0.24675324675324675
49c8055f6830 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3b41d687ff30583540d055f6995de00530cca81d-dirty"
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39 chr1 165243781 165243781 Prrx1 0.36063936063936064 0.34065934065934067
49c8055f6830 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3b41d687ff30583540d055f6995de00530cca81d-dirty"
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40 chr1 165333772 165333772 Gorab 0.36863136863136864 0.3956043956043956
49c8055f6830 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3b41d687ff30583540d055f6995de00530cca81d-dirty"
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41 chr1 169619689 169619689 Lmx1a 0.11888111888111888 0.16783216783216784
49c8055f6830 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3b41d687ff30583540d055f6995de00530cca81d-dirty"
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42 chr1 170362300 170362300 Pbx1 0.003996003996003996 0.002997002997002997
49c8055f6830 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3b41d687ff30583540d055f6995de00530cca81d-dirty"
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43 chr1 180249284 180249284 Gm16586 0.0 0.0
49c8055f6830 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3b41d687ff30583540d055f6995de00530cca81d-dirty"
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44 chr1 182823250 182823250 Lefty2 0.27472527472527475 0.33266733266733267
49c8055f6830 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3b41d687ff30583540d055f6995de00530cca81d-dirty"
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45 chr1 182865170 182865170 Lefty1 0.25674325674325676 0.3086913086913087
49c8055f6830 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3b41d687ff30583540d055f6995de00530cca81d-dirty"
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46 chr1 188529871 188529871 Tgfb2 0.13486513486513488 0.16583416583416583
49c8055f6830 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3b41d687ff30583540d055f6995de00530cca81d-dirty"
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47 chr1 194979306 194979306 Irf6 0.12987012987012986 0.15284715284715283