diff test-data/sanger_full_range_report_results1.txt @ 4:2c1f0fe810f7 draft

Uploaded

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/sanger_full_range_report_results1.txt	Wed Apr 15 11:32:11 2015 -0400
@@ -0,0 +1,40 @@
+
+SUMMARISING RUN PARAMETERS
+==========================
+Input filename: ./input_singles
+Trimming mode: single-end
+Trim Galore version: 0.3.7
+Quality Phred score cutoff: 20
+Quality encoding type selected: ASCII+33
+Adapter sequence: 'AGATCGGAAGAGC'
+Maximum trimming error rate: 0.1 (default)
+Minimum required adapter overlap (stringency): 1 bp
+Minimum required sequence length before a sequence gets removed: 20 bp
+
+
+cutadapt version 1.1
+Command line parameters: -f fastq -e 0.1 -q 20 -O 1 -a AGATCGGAAGAGC ./input_singles
+Maximum error rate: 10.00%
+   Processed reads: 2
+     Trimmed reads: 1 ( 50.0%)
+   Total basepairs:          168 (0.0 Mbp)
+ Trimmed basepairs:            1 (0.0 Mbp) (0.60% of total)
+   Too short reads: 0 (  0.0% of processed reads)
+    Too long reads: 0 (  0.0% of processed reads)
+        Total time:      0.00 s
+     Time per read:      0.32 ms
+
+=== Adapter 1 ===
+
+Adapter 'AGATCGGAAGAGC', length 13, was trimmed 1 times.
+
+Lengths of removed sequences
+length	count	expected
+1	1	0.5
+
+
+RUN STATISTICS FOR INPUT FILE: ./input_singles
+=============================================
+2 sequences processed in total
+Sequences removed because they became shorter than the length cutoff of 20 bp:	0 (0.0%)
+