Mercurial > repos > diego > rtg_investigator
view tools/rtg/genomesim.xml @ 1:8593828f91e7 default tip
Full galaxy wrapper
author | diego |
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date | Sat, 21 Apr 2012 21:36:15 -0400 |
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<tool id="rtg_genomesim" name="Simulate a genome"> <description>with rtg genomesim</description> <command interpreter="bash">galaxy-rtg-wrapper.sh genomesim --min-length $minlength --max-length $maxlength -n $numseqs --seed $seed -o ${output.extra_files_path} >$output</command> <inputs> <param name="minlength" type="integer" value="20000" label="Minimum contig length"/> <param name="maxlength" type="integer" value="100000" label="Maximum contig length"/> <param name="numseqs" type="integer" value="10" label="Number of contigs"/> <param name="seed" type="integer" value="42" label="Seed" help="Seed for the random number generator"/> </inputs> <outputs> <data format="rtg_sdf" name="output" /> </outputs> <help> This tool creates an SDF containing randomly generated contigs representing a genome. </help> </tool>