annotate ct_macros.xml @ 3:39f348e76f41 draft

"planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/ commit 85476ee7f3b1d96e9d0afb972af1aaa67d990ce4"

<macros>
    <token name="@TOOL_VERSION@">1.0.0</token>
    <token name="@HELP@">More information can be found at https://github.com/ebi-gene-expression-group/cell-types-analysis</token>
    <token name="@PROFILE@">18.01</token>
    <xml name="requirements">
      <requirements>
        <requirement type="package" version="0.0.8">cell-types-analysis</requirement>
            <yield/>
      </requirements>
    </xml>
    <xml name="version">
      <version_command><![CDATA[
        conda list | grep cell-types-analysis | egrep -o [0-9]\.[0-9]\.[0-9]
    ]]></version_command>
    </xml>
    <token name="@VERSION_HISTORY@"><![CDATA[
**Version history**
0.0.5+galaxy0: Initial contribution. Andrey Solovyev, Expression Atlas team https://www.ebi.ac.uk/gxa/home at EMBL-EBI https://www.ebi.ac.uk/.
0.0.5+galaxy1: Standardise input/output format into .txt. 
    ]]></token>
    <xml name="citations">
      <citations>
        <citation type="bibtex">
          @misc{github-cell-types-analysis.git,
            author = {Andrey Solovyev, EBI Gene Expression Team},
            year = {2020},
            title = {Suite of scripts for analysis of scRNA-seq cell type classification tool outputs},
            publisher = {GitHub},
            journal = {GitHub repository},
            url = {https://github.com/ebi-gene-expression-group/cell-types-analysis.git},
          }
        </citation>
        <citation type="doi">10.1101/2020.04.08.032698</citation>
        <yield />
      </citations>
    </xml>
</macros>