Mercurial > repos > iracooke > protk_blast

view tool_dependencies.xml @ 0:88ada6a29993

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author iracooke
date Mon, 04 Mar 2013 04:18:28 -0500
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children 0d86d29aaed6
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<?xml version="1.0"?>
<tool_dependency>
    <package name="blast" version="2.2.27">
        <install version="1.0">
            <actions>
                <action type="download_by_url">https://dl.dropbox.com/u/226794/galaxy_protk.tar.gz</action>
                <action type="shell_command">sh install_blast.sh $INSTALL_DIR 1.1.9</action>
                <action type="move_file">
                    <source>install_blast.sh</source>
                    <destination>$INSTALL_DIR</destination>
                </action>
                <action type="set_environment">
                    <environment_variable name="PROTK_BLAST_ROOT" action="set_to">$INSTALL_DIR</environment_variable>
                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
                </action>
            </actions>
        </install>
        <readme>
            Installs OMSSA via the protk installer
        </readme>
    </package>

</tool_dependency>