Mercurial > repos > iuc > beagle
diff test-data/test_output.log @ 2:563fd95fa88a draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/beagle commit 607e1d083ce036edde6f0ddb66871608c0ff7ca8
| author | iuc |
|---|---|
| date | Sat, 03 May 2025 11:38:43 +0000 |
| parents | 553b27c30eb8 |
| children |
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--- a/test-data/test_output.log Sun Jan 22 12:42:41 2023 +0000 +++ b/test-data/test_output.log Sat May 03 11:38:43 2025 +0000 @@ -1,10 +1,10 @@ -beagle.21Apr21.304.jar (version 5.2) -Copyright (C) 2014-2021 Brian L. Browning -Enter "java -jar beagle.21Apr21.304.jar" to list command line argument -Start time: 08:46 PM GMT on 26 Jun 2021 +beagle.29Oct24.c8e.jar (version 5.4) +Copyright (C) 2014-2022 Brian L. Browning +Enter "java -jar beagle.29Oct24.c8e.jar" to list command line argument +Start time: 10:39 PM CEST on 02 May 2025 -Command line: java -Xmx989m -jar beagle.21Apr21.304.jar - gt=/tmp/tmpoahokk9w/files/e/9/3/dataset_e93c5cb3-373e-4432-80ab-47ff1068bc9f.dat +Command line: java -Xmx1024m -jar beagle.29Oct24.c8e.jar + gt=/home/elmedjadji/Documents/newgal/galaxy/database/objects/4/3/b/dataset_43be6aa5-2515-4fff-be35-4cbf54b2842f.dat chrom=22:100- ne=1000000 window=40.0 @@ -30,45 +30,35 @@ Study samples: 191 Window 1 [22:20000086-20016908] -Reference markers: 223 Study markers: 223 -Burnin iteration 1: 1 second - +Burnin iteration 1: 0 seconds Burnin iteration 2: 0 seconds +Burnin iteration 3: 0 seconds -Burnin iteration 3: 0 seconds +Estimated ne: 333498 +Estimated err: 2.0e-03 Phasing iteration 1: 0 seconds - Phasing iteration 2: 0 seconds - Phasing iteration 3: 0 seconds - Phasing iteration 4: 0 seconds - Phasing iteration 5: 0 seconds - Phasing iteration 6: 0 seconds - Phasing iteration 7: 0 seconds - Phasing iteration 8: 0 seconds - Phasing iteration 9: 0 seconds - Phasing iteration 10: 0 seconds - Phasing iteration 11: 0 seconds - Phasing iteration 12: 0 seconds +Low frequency phasing: 0 seconds Cumulative Statistics: Study markers: 223 -Haplotype phasing time: 2 seconds -Total time: 3 seconds +Haplotype phasing time: 1 second +Total time: 2 seconds -End time: 08:46 PM GMT on 26 Jun 2021 -beagle.21Apr21.304.jar finished +End time: 10:39 PM CEST on 02 May 2025 +beagle.29Oct24.c8e.jar finished