Mercurial > repos > iuc > isoformswitchanalyzer
comparison test-data/test06_consequences_summary.tabular @ 5:b3f292d9f35d draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/isoformswitchanalyzer commit 7b7d9892618706dad95641831db8b9f83deb86e1
| author | iuc |
|---|---|
| date | Fri, 02 Jun 2023 10:27:16 +0000 |
| parents | f3fefb6d8254 |
| children |
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| 4:512d6462f2ce | 5:b3f292d9f35d |
|---|---|
| 1 Comparison featureCompared switchConsequence nrGenesWithConsequences nrIsoWithConsequences | 1 Comparison featureCompared switchConsequence nrGenesWithConsequences nrIsoWithConsequences |
| 2 cancer vs health Intron | 2 health vs cancer Intron |
| 3 retention Intron retention gain 3 5 | 3 retention Intron retention gain 9 11 |
| 4 cancer vs health Intron | 4 health vs cancer Intron |
| 5 retention Intron retention loss 9 11 | 5 retention Intron retention loss 3 5 |
| 6 cancer vs health Isoform seq | 6 health vs cancer Isoform seq |
| 7 similarity Length gain 11 17 | 7 similarity Length gain 15 26 |
| 8 cancer vs health Isoform seq | 8 health vs cancer Isoform seq |
| 9 similarity Length loss 15 26 | 9 similarity Length loss 11 17 |
| 10 cancer vs health NMD | 10 health vs cancer NMD |
| 11 status NMD insensitive 1 3 | 11 status NMD insensitive 2 2 |
| 12 cancer vs health NMD | 12 health vs cancer NMD |
| 13 status NMD sensitive 2 2 | 13 status NMD sensitive 1 3 |
| 14 cancer vs health Tss Tss more downstream 19 30 | 14 health vs cancer Tss Tss more downstream 14 29 |
| 15 cancer vs health Tss Tss more upstream 14 29 | 15 health vs cancer Tss Tss more upstream 19 30 |
| 16 cancer vs health Tts Tts more downstream 6 13 | 16 health vs cancer Tts Tts more downstream 6 8 |
| 17 cancer vs health Tts Tts more upstream 6 8 | 17 health vs cancer Tts Tts more upstream 6 13 |
| 18 cancer vs health ORF | 18 health vs cancer ORF |
| 19 genomic Any consequence 0 0 | 19 genomic Any consequence 0 0 |