Mercurial > repos > iuc > isoformswitchanalyzer

annotate test-data/test06_consequences_summary.tabular @ 5:b3f292d9f35d draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/isoformswitchanalyzer commit 7b7d9892618706dad95641831db8b9f83deb86e1
author iuc
date Fri, 02 Jun 2023 10:27:16 +0000
parents f3fefb6d8254
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f3fefb6d8254 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/isoformswitchanalyzer commit 2c61e4c6151000201dd9a8323722a380bc235380
iuc
parents:
diff changeset
1 Comparison featureCompared switchConsequence nrGenesWithConsequences nrIsoWithConsequences
5
b3f292d9f35d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/isoformswitchanalyzer commit 7b7d9892618706dad95641831db8b9f83deb86e1
iuc
parents: 0
diff changeset
2 health vs cancer Intron
b3f292d9f35d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/isoformswitchanalyzer commit 7b7d9892618706dad95641831db8b9f83deb86e1
iuc
parents: 0
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3 retention Intron retention gain 9 11
b3f292d9f35d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/isoformswitchanalyzer commit 7b7d9892618706dad95641831db8b9f83deb86e1
iuc
parents: 0
diff changeset
4 health vs cancer Intron
b3f292d9f35d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/isoformswitchanalyzer commit 7b7d9892618706dad95641831db8b9f83deb86e1
iuc
parents: 0
diff changeset
5 retention Intron retention loss 3 5
b3f292d9f35d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/isoformswitchanalyzer commit 7b7d9892618706dad95641831db8b9f83deb86e1
iuc
parents: 0
diff changeset
6 health vs cancer Isoform seq
b3f292d9f35d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/isoformswitchanalyzer commit 7b7d9892618706dad95641831db8b9f83deb86e1
iuc
parents: 0
diff changeset
7 similarity Length gain 15 26
b3f292d9f35d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/isoformswitchanalyzer commit 7b7d9892618706dad95641831db8b9f83deb86e1
iuc
parents: 0
diff changeset
8 health vs cancer Isoform seq
b3f292d9f35d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/isoformswitchanalyzer commit 7b7d9892618706dad95641831db8b9f83deb86e1
iuc
parents: 0
diff changeset
9 similarity Length loss 11 17
b3f292d9f35d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/isoformswitchanalyzer commit 7b7d9892618706dad95641831db8b9f83deb86e1
iuc
parents: 0
diff changeset
10 health vs cancer NMD
b3f292d9f35d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/isoformswitchanalyzer commit 7b7d9892618706dad95641831db8b9f83deb86e1
iuc
parents: 0
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11 status NMD insensitive 2 2
b3f292d9f35d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/isoformswitchanalyzer commit 7b7d9892618706dad95641831db8b9f83deb86e1
iuc
parents: 0
diff changeset
12 health vs cancer NMD
b3f292d9f35d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/isoformswitchanalyzer commit 7b7d9892618706dad95641831db8b9f83deb86e1
iuc
parents: 0
diff changeset
13 status NMD sensitive 1 3
b3f292d9f35d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/isoformswitchanalyzer commit 7b7d9892618706dad95641831db8b9f83deb86e1
iuc
parents: 0
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14 health vs cancer Tss Tss more downstream 14 29
b3f292d9f35d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/isoformswitchanalyzer commit 7b7d9892618706dad95641831db8b9f83deb86e1
iuc
parents: 0
diff changeset
15 health vs cancer Tss Tss more upstream 19 30
b3f292d9f35d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/isoformswitchanalyzer commit 7b7d9892618706dad95641831db8b9f83deb86e1
iuc
parents: 0
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16 health vs cancer Tts Tts more downstream 6 8
b3f292d9f35d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/isoformswitchanalyzer commit 7b7d9892618706dad95641831db8b9f83deb86e1
iuc
parents: 0
diff changeset
17 health vs cancer Tts Tts more upstream 6 13
b3f292d9f35d planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/isoformswitchanalyzer commit 7b7d9892618706dad95641831db8b9f83deb86e1
iuc
parents: 0
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18 health vs cancer ORF
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f3fefb6d8254 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/isoformswitchanalyzer commit 2c61e4c6151000201dd9a8323722a380bc235380
iuc
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19 genomic Any consequence 0 0