Mercurial > repos > iuc > package_tophat_2_0_14
comparison tool_dependencies.xml @ 0:995175fb61c4 draft
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author | iuc |
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date | Thu, 14 May 2015 09:38:47 -0400 |
parents | |
children | 0c83efe0936b |
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-1:000000000000 | 0:995175fb61c4 |
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1 <?xml version="1.0"?> | |
2 <tool_dependency> | |
3 <package name="tophat" version="2.0.14"> | |
4 <install version="1.0"> | |
5 <actions_group> | |
6 <actions architecture="x86_64" os="linux"> | |
7 <action type="download_by_url">https://depot.galaxyproject.org/package/linux/x86_64/tophat/tophat-2.0.14-Linux-x86_64.tar.gz</action> | |
8 <action type="move_directory_files"> | |
9 <source_directory>.</source_directory> | |
10 <destination_directory>$INSTALL_DIR/bin</destination_directory> | |
11 </action> | |
12 </actions> | |
13 <actions> | |
14 <action type="download_by_url">http://tophat.cbcb.umd.edu/downloads/tophat-2.0.14.tar.gz</action> | |
15 <action type="shell_command">./configure --prefix=$INSTALL_DIR</action> | |
16 <action type="make_install" /> | |
17 </actions> | |
18 <action type="set_environment"> | |
19 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable> | |
20 </action> | |
21 </actions_group> | |
22 </install> | |
23 <readme /> | |
24 </package> | |
25 </tool_dependency> |